PDB: 2044 件ウェブページステータス検索Chemie searchBIRD

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7Z01	Z-SBTubA4 photoswitch bound to tubulin-DARPin D1 complex 分子名称: 2-methoxy-5-[2-(5,6,7-trimethoxy-1,3-benzothiazol-2-yl)ethyl]phenol, CALCIUM ION, Designed Ankyrin Repeat Protein (DARPIN) D1, ... 著者 Wranik, M, Weinert, T, Standfuss, J, Steinmetz, M. 登録日 2022-02-21 公開日 2022-03-30 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.82 Å) 主引用文献 In Vivo Photocontrol of Microtubule Dynamics and Integrity, Migration and Mitosis, by the Potent GFP-Imaging-Compatible Photoswitchable Reagents SBTubA4P and SBTub2M. J.Am.Chem.Soc., 144, 2022
6QQ9	Cryogenic temperature structure of the fluorescent protein Cerulean recorded after an accumulated dose of 5.8 MGy 分子名称: CARBON DIOXIDE, Green fluorescent protein 著者 Gotthard, G, Aumonier, S, Royant, A. 登録日 2019-02-18 公開日 2019-06-19 最終更新日 2019-07-31 実験手法 X-RAY DIFFRACTION (1.82 Å) 主引用文献 Specific radiation damage is a lesser concern at room temperature. Iucrj, 6, 2019
3DKV	Crystal structure of adenylate kinase variant AKlse1 分子名称: 1,2-ETHANEDIOL, Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, ... 著者 Bannen, R.M, Bianchetti, C.M, Bingman, C.A, Bitto, E.B. 登録日 2008-06-26 公開日 2009-06-09 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.82 Å) 主引用文献 Crystal structure of adenylate kinase variant AKlse1. To be Published
2H9W	Green fluorescent protein ground states: the influence of a second protonation site near the chromophore 分子名称: Green fluorescent protein, SULFATE ION 著者 Garau, G. 登録日 2006-06-12 公開日 2007-04-24 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.82 Å) 主引用文献 Green Fluorescent Protein Ground States: The Influence of a Second Protonation Site near the Chromophore. Biochemistry, 46, 2007
2C9I	Structure of the fluorescent protein asFP499 from Anemonia sulcata 分子名称: GREEN FLUORESCENT PROTEIN ASFP499 著者 Renzi, F, Nienhaus, K, Wiedenmann, J, Vallone, B, Nienhaus, G.U. 登録日 2005-12-12 公開日 2007-01-16 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.82 Å) 主引用文献 Chromophore-Protein Interactions in the Anthozoan Green Fluorescent Protein Asfp499 Biophys.J., 91, 2006
6ZJB	Crystal structure of human adenylate kinase 3, AK3, in complex with inhibitor Gp5A 分子名称: GTP:AMP phosphotransferase AK3, mitochondrial, MAGNESIUM ION, ... 著者 Grundstrom, C, Rogne, P, Wolf-Watz, M, Sauer-Eriksson, A.E. 登録日 2020-06-28 公開日 2020-09-16 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.822 Å) 主引用文献 Structural Basis for GTP versus ATP Selectivity in the NMP Kinase AK3. Biochemistry, 59, 2020
4ZF4	Crystal structure of Green Fluorescent Protein (GFP); S65T, Y66(Cl1Y), H148D; circular permutant (50-51) 分子名称: Green fluorescent protein 著者 Oltrogge, L.M, Boxer, S.G. 登録日 2015-04-21 公開日 2015-06-10 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.823 Å) 主引用文献 Short Hydrogen Bonds and Proton Delocalization in Green Fluorescent Protein (GFP). Acs Cent.Sci., 1, 2015
8SFV	High affinity nanobodies to GFP 分子名称: GLYCEROL, Green fluorescent protein, LaG19, ... 著者 Ketaren, N.E, Rout, M.P, Bonanno, J.B, Almo, S.C. 登録日 2023-04-11 公開日 2024-05-22 実験手法 X-RAY DIFFRACTION (1.83 Å) 主引用文献 High affinity nanobodies to GFP To Be Published
7NUU	Crystal structure of human AMDHD2 in complex with Zn 分子名称: GLYCEROL, N-acetylglucosamine-6-phosphate deacetylase, ZINC ION 著者 Ruegenberg, S, Kroef, V, Baumann, U, Denzel, M.S. 登録日 2021-03-14 公開日 2021-04-28 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.836 Å) 主引用文献 GFPT2/GFAT2 and AMDHD2 act in tandem to control the hexosamine pathway. Elife, 11, 2022
8I4K	Structure of Azami Red1.0, a red fluorescent protein engineered from Azami Green 分子名称: Azami Red1.0, CALCIUM ION 著者 Otsubo, S, Takekawa, N, Imamura, H, Imada, K. 登録日 2023-01-19 公開日 2023-11-01 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.84 Å) 主引用文献 Red fluorescent proteins engineered from green fluorescent proteins. Proc.Natl.Acad.Sci.USA, 120, 2023
2AG5	Crystal Structure of Human DHRS6 分子名称: NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SULFATE ION, dehydrogenase/reductase (SDR family) member 6 著者 Kunde, G, Lukacik, P, Papagrigoriou, E, Sundstrom, M, Arrowsmith, C, Weigelt, J, Edwards, A, Von Delft, F, Oppermann, U, Structural Genomics Consortium (SGC) 登録日 2005-07-26 公開日 2005-08-09 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.84 Å) 主引用文献 Characterization of human DHRS6, an orphan short chain dehydrogenase/reductase enzyme: a novel, cytosolic type 2 R-beta-hydroxybutyrate dehydrogenase J.Biol.Chem., 281, 2006
3EK7	Calcium-saturated GCaMP2 dimer 分子名称: CALCIUM ION, Myosin light chain kinase, Green fluorescent protein, ... 著者 Akerboom, J, Velez Rivera, J.D, Looger, L.L, Schreiter, E.R. 登録日 2008-09-18 公開日 2008-12-16 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Crystal Structures of the GCaMP Calcium Sensor Reveal the Mechanism of Fluorescence Signal Change and Aid Rational Design J.Biol.Chem., 284, 2009
1W7S	Wild-Type Aequorea victoria Green Fluorescent Protein 分子名称: GREEN FLUORESCENT PROTEIN 著者 Van Thor, J.J, Georgiev, G.Y, Towrie, M, Sage, J.T. 登録日 2004-09-09 公開日 2005-07-20 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Ultrafast and Low Barrier Motions in the Photoreactions of the Green Fluorescent Protein J.Biol.Chem., 280, 2005
5H7G	Crystal structure of the BCL6 BTB domain in complex with F1324 分子名称: B-cell lymphoma 6 protein, F1324 peptide, SULFATE ION 著者 Sogabe, S, Ida, K, Lane, W, Snell, G. 登録日 2016-11-18 公開日 2016-12-07 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Discovery of high-affinity BCL6-binding peptide and its structure-activity relationship. Biochem. Biophys. Res. Commun., 482, 2017
5DPG	sfGFP mutant - 133 p-cyano-L-phenylalanine 分子名称: 1,2-ETHANEDIOL, Green fluorescent protein, SODIUM ION 著者 Dippel, A.B, Olenginski, G.M, Maurici, N, Liskov, M.T, Brewer, S.H, Phillips-Piro, C.M. 登録日 2015-09-12 公開日 2016-01-13 最終更新日 2019-11-27 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Probing the effectiveness of spectroscopic reporter unnatural amino acids: a structural study. Acta Crystallogr D Struct Biol, 72, 2016
1W7T	Photoproduct of the Wild-Type Aequorea victoria Green Fluorescent Protein at 100 K 分子名称: GREEN FLUORESCENT PROTEIN 著者 Van Thor, J.J, Georgiev, G.Y, Towrie, M, Sage, J.T. 登録日 2004-09-09 公開日 2005-07-20 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Ultrafast and Low Barrier Motions in the Photoreactions of the Green Fluorescent Protein J.Biol.Chem., 280, 2005
4WEO	Crystal Structure of a Putative acetoin(Diacetyl) Reductase Burkholderia cenocepacia 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCEROL, ... 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2014-09-10 公開日 2014-09-24 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Crystal Structure of a Putative acetoin(Diacetyl) Reductase Burkholderia cenocepacia to be published
7A8J	rsGreen0.7-K206A-H148V in the green-on state 分子名称: GLYCEROL, Green fluorescent protein 著者 De Zitter, E, Dedecker, P, Van Meervelt, L. 登録日 2020-08-30 公開日 2021-02-17 最終更新日 2021-05-05 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Structure-Function Dataset Reveals Environment Effects within a Fluorescent Protein Model System*. Angew.Chem.Int.Ed.Engl., 60, 2021
7A7X	rsGreen0.7-F145M in the green-off state 分子名称: Green fluorescent protein 著者 De Zitter, E, Dedecker, P, Van Meervelt, L. 登録日 2020-08-30 公開日 2021-02-17 最終更新日 2021-05-05 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Structure-Function Dataset Reveals Environment Effects within a Fluorescent Protein Model System*. Angew.Chem.Int.Ed.Engl., 60, 2021
3UFZ	Crystal structure of a Trp-less green fluorescent protein translated by the universal genetic code 分子名称: Green fluorescent protein 著者 Kawahara-Kobayashi, A, Araiso, Y, Matsuda, T, Yokoyama, S, Kigawa, T, Nureki, O, Kiga, D. 登録日 2011-11-02 公開日 2012-10-17 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Simplification of the genetic code: restricted diversity of genetically encoded amino acids. Nucleic Acids Res., 40, 2012
8FFC	Crystal structure of iron bound Dps protein (PA0962) from Pseudomonas aeruginosa (cubic form) 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, FE (II) ION, Probable dna-binding stress protein 著者 Lovell, S, Kashipathy, M.M, Battaile, K.P, Rivera, M. 登録日 2022-12-08 公開日 2023-03-08 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Pseudomonas aeruginosa Dps (PA0962) Functions in H 2 O 2 Mediated Oxidative Stress Defense and Exhibits In Vitro DNA Cleaving Activity. Int J Mol Sci, 24, 2023
6YLN	mTurquoise2 SG P212121 - Directional optical properties of fluorescent proteins 分子名称: EGFP, POTASSIUM ION 著者 Myskova, J, Rybakova, O, Brynda, J, Lazar, J. 登録日 2020-04-07 公開日 2020-12-16 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Directionality of light absorption and emission in representative fluorescent proteins. Proc.Natl.Acad.Sci.USA, 117, 2020
7U6U	Structure of an intellectual disability-associated ornithine decarboxylase variant G84R in complex with PLP 分子名称: Ornithine decarboxylase, PYRIDOXAL-5'-PHOSPHATE 著者 Zhou, X.E, Schultz, C.R, Powell, K.S, Henrickson, A, Lamp, J, Brunzelle, J.S, Demeler, B, Vega, I.E, Bachmann, A.S, Melcher, K. 登録日 2022-03-06 公開日 2022-10-19 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Structure and Enzymatic Activity of an Intellectual Disability-Associated Ornithine Decarboxylase Variant, G84R. Acs Omega, 7, 2022
2C7Q	HhaI DNA methyltransferase complex with oligonucleotide containing 2- aminopurine outside the recognition sequence (paired with G) and SAH 分子名称: 5'-D(*T*GP*GP*(2PR)*GP*GP*(5CM)*GP*CP*TP*GP* AP*C)-3', 5'-D(*T*GP*TP*CP*AP*GP*CP*GP*CP*CP*GP*CP*C)-3', CITRIC ACID, ... 著者 Daujotyte, D, Grazulis, S. 登録日 2005-11-27 公開日 2005-12-14 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Time-Resolved Fluorescence of 2-Aminopurine as a Probe of Base Flipping in M.HhaI-DNA Complexes Nucleic Acids Res., 33, 2005
4DXN	Crystal Structure of a reconstructed Kaede-type Red Fluorescent Protein, Least Evolved Ancestor (LEA) 分子名称: LEAST EVOLVED ANCESTOR (LEA) GFP-LIKE PROTEINS, SULFATE ION 著者 Kim, H, Fromme, R, Wachter, R.M. 登録日 2012-02-27 公開日 2013-02-27 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Acid-Base Catalysis and Crystal Structures of a Least Evolved Ancestral GFP-like Protein Undergoing Green-to-Red Photoconversion. Biochemistry, 52, 2013

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