Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

1E7V
DownloadVisualize
BU of 1e7v by Molmil
Structure determinants of phosphoinositide 3-kinase inhibition by wortmannin, LY294002, quercetin, myricetin and staurosporine
分子名称: 2-MORPHOLIN-4-YL-7-PHENYL-4H-CHROMEN-4-ONE, PHOSPHATIDYLINOSITOL 3-KINASE CATALYTIC SUBUNIT
著者Walker, E.H, Pacold, M.E, Perisic, O, Stephens, L, Hawkins, P.T, Wymann, M.P, Williams, R.L.
登録日2000-09-08
公開日2000-11-17
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural determinants of phosphoinositide 3-kinase inhibition by wortmannin, LY294002, quercetin, myricetin, and staurosporine.
Mol.Cell, 6, 2000
5LKH
DownloadVisualize
BU of 5lkh by Molmil
Cryo-EM structure of the Tc toxin TcdA1 in its pore state (obtained by flexible fitting)
分子名称: TcdA1
著者Gatsogiannis, C, Merino, F, Prumbaum, D, Roderer, D, Leidreiter, F, Meusch, D, Raunser, S.
登録日2016-07-22
公開日2016-08-31
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (3.46 Å)
主引用文献Membrane insertion of a Tc toxin in near-atomic detail.
Nat.Struct.Mol.Biol., 23, 2016
1E8M
DownloadVisualize
BU of 1e8m by Molmil
PROLYL OLIGOPEPTIDASE FROM PORCINE BRAIN, MUTANT, COMPLEXED WITH INHIBITOR
分子名称: GLYCEROL, N-[(benzyloxy)carbonyl]glycyl-L-proline, PROLYL ENDOPEPTIDASE
著者Fulop, V.
登録日2000-09-27
公開日2001-01-16
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structures of Prolyl Oligopeptidase Substrate/ Inhibitor Complexes. Use of Inhibitor Binding for Titration of the Catalytic Histidine Residue
J.Biol.Chem., 276, 2001
8PMR
DownloadVisualize
BU of 8pmr by Molmil
NADase from Aspergillus fumigatus with mutated calcium binding motif (D219A/E220A)
分子名称: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Kallio, J.P, Ferrario, E, Stromland, O, Ziegler, M.
登録日2023-06-29
公開日2023-11-15
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Novel Calcium-Binding Motif Stabilizes and Increases the Activity of Aspergillus fumigatus Ecto-NADase.
Biochemistry, 62, 2023
1EAS
DownloadVisualize
BU of 1eas by Molmil
NONPEPTIDIC INHIBITORS OF HUMAN LEUKOCYTE ELASTASE. 3. DESIGN, SYNTHESIS, X-RAY CRYSTALLOGRAPHIC ANALYSIS, AND STRUCTURE-ACTIVITY RELATIONSHIPS FOR A SERIES OF ORALLY ACTIVE 3-AMINO-6-PHENYLPYRIDIN-2-ONE TRIFLUOROMETHYL KETONES
分子名称: 3-[[(METHYLAMINO)SULFONYL]AMINO]-2-OXO-6-PHENYL-N-[3,3,3-TRIFLUORO-1-(1-METHYLETHYL)-2-OXOPHENYL]-1(2H)-PYRIDINE ACETAMIDE, PORCINE PANCREATIC ELASTASE, SODIUM ION, ...
著者Ceccarelli, C.
登録日1994-11-22
公開日1995-02-07
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Nonpeptidic inhibitors of human leukocyte elastase. 3. Design, synthesis, X-ray crystallographic analysis, and structure-activity relationships for a series of orally active 3-amino-6-phenylpyridin-2-one trifluoromethyl ketones.
J.Med.Chem., 37, 1994
5LMR
DownloadVisualize
BU of 5lmr by Molmil
Structure of bacterial 30S-IF1-IF3-mRNA-tRNA translation pre-initiation complex(state-2B)
分子名称: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Hussain, T, Llacer, J.L, Wimberly, B.T, Ramakrishnan, V.
登録日2016-08-01
公開日2016-10-05
最終更新日2025-10-01
実験手法ELECTRON MICROSCOPY (4.45 Å)
主引用文献Large-Scale Movements of IF3 and tRNA during Bacterial Translation Initiation.
Cell, 167, 2016
1ESB
DownloadVisualize
BU of 1esb by Molmil
DIRECT STRUCTURE OBSERVATION OF AN ACYL-ENZYME INTERMEDIATE IN THE HYDROLYSIS OF AN ESTER SUBSTRATE BY ELASTASE
分子名称: CALCIUM ION, N-[(BENZYLOXY)CARBONYL]-L-ALANINE, PORCINE PANCREATIC ELASTASE, ...
著者Ding, X, Rasmussen, B, Petsko, G.A, Ringe, D.
登録日1994-02-04
公開日1994-04-30
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Direct structural observation of an acyl-enzyme intermediate in the hydrolysis of an ester substrate by elastase.
Biochemistry, 33, 1994
5LJE
DownloadVisualize
BU of 5lje by Molmil
Crystal structure of holo human CRBP1/K40L,Q108L mutant
分子名称: RETINOL, Retinol-binding protein 1, SODIUM ION
著者Zanotti, G, Vallese, F, Berni, R, Menozzi, I.
登録日2016-07-18
公開日2017-01-18
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural and molecular determinants affecting the interaction of retinol with human CRBP1.
J. Struct. Biol., 197, 2017
1E9R
DownloadVisualize
BU of 1e9r by Molmil
Bacterial conjugative coupling protein TrwBdeltaN70. Trigonal form in complex with sulphate.
分子名称: CONJUGAL TRANSFER PROTEIN TRWB, SULFATE ION
著者Gomis-Rueth, F.X, Moncalian, G, Cabezon, E, de la Cruz, F, Coll, M.
登録日2000-10-26
公開日2001-02-06
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The Bacterial Conjugation Protein Trwb Resembles Ring Helicases and F1-ATPase
Nature, 409, 2001
1EB2
DownloadVisualize
BU of 1eb2 by Molmil
Trypsin inhibitor complex (BPO)
分子名称: 3-[(Z)-AMINO(IMINO)METHYL]-N-[2-(4-BENZOYL-1-PIPERIDINYL)-2-OXO-1-PHENYLETHYL]BENZAMIDE, CALCIUM ION, SULFATE ION, ...
著者Wilkinson, K.W, Young, S.C, Liebeschuetz, J.W, Brady, R.L.
登録日2001-07-18
公開日2002-02-11
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Pro_Select: Combining Structure-Based Drug Design and Array-Based Chemistry for Rapid Lead Discovery. 2. The Development of a Series of Highly Potent and Selective Factor Xa Inhibitors
J.Med.Chem., 45, 2002
1EBE
DownloadVisualize
BU of 1ebe by Molmil
Laue diffraction study on the structure of cytochrome c peroxidase compound I
分子名称: CYTOCHROME C PEROXIDASE, OXYGEN ATOM, PROTOPORPHYRIN IX CONTAINING FE
著者Fulop, V, Phizackerley, R.P, Soltis, S.M, Clifton, I.J, Wakatsuki, S, Erman, J.E, Hajdu, J, Edwards, S.L.
登録日2001-07-25
公開日2001-07-26
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Laue Diffraction Study on the Structure of Cytochrome C Peroxidase Compound I
Structure, 2, 1994
1EBU
DownloadVisualize
BU of 1ebu by Molmil
HOMOSERINE DEHYDROGENASE COMPLEX WITH NAD ANALOGUE AND L-HOMOSERINE
分子名称: 3-AMINOMETHYL-PYRIDINIUM-ADENINE-DINUCLEOTIDE, HOMOSERINE DEHYDROGENASE, L-HOMOSERINE, ...
著者DeLaBarre, B, Thompson, P.R, Wright, G.D, Berghuis, A.M.
登録日2000-01-24
公開日2000-03-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structures of homoserine dehydrogenase suggest a novel catalytic mechanism for oxidoreductases.
Nat.Struct.Biol., 7, 2000
1ECU
DownloadVisualize
BU of 1ecu by Molmil
SOLUTION STRUCTURE OF E2F BINDING DNA FRAGMENT GCGCGAAAC-T-GTTTCGCGC
分子名称: DNA (5'-D(*GP*CP*GP*CP*GP*AP*AP*AP*CP*TP*GP*TP*TP*TP*CP*GP*CP*GP*C)-3')
著者Wu, J.H, Chang, C, Pei, J.M, Xiao, Q, Shi, Y.Y.
登録日2000-01-26
公開日2000-02-02
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Solution structure of E2F binding DNA fragment GCGCGAAAC-T-GTTTCGCGC studied by Molecular Dynamics Simulation and Two Dimensional NMR experiment
to be published, 2000
5LO9
DownloadVisualize
BU of 5lo9 by Molmil
Thiosulfate dehydrogenase (TsdBA) from Marichromatium purpuratum - "as isolated" form
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Cytochrome C, ...
著者Brito, J.A, Kurth, J.M, Reuter, J, Flegler, A, Koch, T, Franke, T, Klein, E, Rowe, S, Butt, J.N, Denkmann, K, Pereira, I.A.C, Dahl, C, Archer, M.
登録日2016-08-08
公開日2016-10-12
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Electron Accepting Units of the Diheme Cytochrome c TsdA, a Bifunctional Thiosulfate Dehydrogenase/Tetrathionate Reductase.
J.Biol.Chem., 291, 2016
1ED6
DownloadVisualize
BU of 1ed6 by Molmil
BOVINE ENDOTHELIAL NITRIC OXIDE SYNTHASE HEME DOMAIN COMPLEXED WITH L-NIO (H4B FREE)
分子名称: ACETATE ION, CACODYLIC ACID, GLYCEROL, ...
著者Raman, C.S, Li, H, Martasek, P, Southan, G.J, Masters, B.S.S, Poulos, T.L.
登録日2000-01-26
公開日2001-01-31
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Crystallographic studies on endothelial nitric oxide synthase complexed with nitric oxide and mechanism-based inhibitors.
Biochemistry, 40, 2001
5LKU
DownloadVisualize
BU of 5lku by Molmil
Crystal structure of the p300 acetyltransferase catalytic core with coenzyme A.
分子名称: COENZYME A, Histone acetyltransferase p300,Histone acetyltransferase p300, ZINC ION
著者Kaczmarska, Z, Ortega, E, Marquez, J.A, Panne, D.
登録日2016-07-25
公開日2016-11-02
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structure of p300 in complex with acyl-CoA variants.
Nat. Chem. Biol., 13, 2017
5LKW
DownloadVisualize
BU of 5lkw by Molmil
Crystal structure of the peptidoglycan-associated lipoprotein (Pal) from Burkholderia cepacia in complex with DAP
分子名称: 2,6-DIAMINOPIMELIC ACID, Putative OmpA family lipoprotein
著者Romano, M, Ruggiero, A, Berisio, R.
登録日2016-07-25
公開日2017-08-16
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The Burkholderia cenocepacia peptidoglycan-associated lipoprotein is involved in epithelial cell attachment and elicitation of inflammation.
Cell. Microbiol., 19, 2017
1EEJ
DownloadVisualize
BU of 1eej by Molmil
CRYSTAL STRUCTURE OF THE PROTEIN DISULFIDE BOND ISOMERASE, DSBC, FROM ESCHERICHIA COLI
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, THIOL:DISULFIDE INTERCHANGE PROTEIN
著者McCarthy, A.A, Haebel, P.W, Torronen, A, Rybin, V, Baker, E.N, Metcalf, P.
登録日2000-01-31
公開日2000-08-03
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of the protein disulfide bond isomerase, DsbC, from Escherichia coli.
Nat.Struct.Biol., 7, 2000
8PMS
DownloadVisualize
BU of 8pms by Molmil
NADase from Aspergillus fumigatus with replaced C-terminus from Neurospora crassa
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Kallio, J.P, Ferrario, E, Stromland, O, Ziegler, M.
登録日2023-06-29
公開日2023-11-15
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Novel Calcium-Binding Motif Stabilizes and Increases the Activity of Aspergillus fumigatus Ecto-NADase.
Biochemistry, 62, 2023
1EF4
DownloadVisualize
BU of 1ef4 by Molmil
SOLUTION STRUCTURE OF THE ESSENTIAL RNA POLYMERASE SUBUNIT RPB10 FROM METHANOBACTERIUM THERMOAUTOTROPHICUM
分子名称: DNA-DIRECTED RNA POLYMERASE, ZINC ION
著者Mackereth, C.D, Arrowsmith, C.H, Edwards, A.M, Mcintosh, L.P, Northeast Structural Genomics Consortium (NESG)
登録日2000-02-07
公開日2000-06-14
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Zinc-bundle structure of the essential RNA polymerase subunit RPB10 from Methanobacterium thermoautotrophicum.
Proc.Natl.Acad.Sci.USA, 97, 2000
5LPA
DownloadVisualize
BU of 5lpa by Molmil
AadA E87Q in complex with ATP, calcium and dihydrostreptomycin
分子名称: 1,2-ETHANEDIOL, ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, ...
著者Stern, A.L, Van der Verren, S.E, Selmer, M.
登録日2016-08-12
公開日2018-01-17
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Structural mechanism of AadA, a dual-specificity aminoglycoside adenylyltransferase fromSalmonella enterica.
J.Biol.Chem., 293, 2018
1EGY
DownloadVisualize
BU of 1egy by Molmil
CYTOCHROME P450ERYF WITH 9-AMINOPHENANTHRENE BOUND
分子名称: 9-AMINOPHENANTHRENE, CYTOCHROME P450ERYF, PROTOPORPHYRIN IX CONTAINING FE
著者Cupp-Vickery, J.R, Anderson, R, Hatziris, Z.
登録日2000-02-17
公開日2000-03-06
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal structures of ligand complexes of P450eryF exhibiting homotropic cooperativity.
Proc.Natl.Acad.Sci.USA, 97, 2000
5LL0
DownloadVisualize
BU of 5ll0 by Molmil
Structure of Polyphosphate Kinase 2 from Francisella tularensis SCHU S4 with polyphosphate
分子名称: Polyphosphate kinase 2, bis[oxidanyl-[oxidanyl-[oxidanyl(phosphonooxy)phosphoryl]oxy-phosphoryl]oxy-phosphoryl] hydrogen phosphate
著者Roach, P.L, Parnell, A.E.
登録日2016-07-25
公開日2017-10-11
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Substrate recognition and mechanism revealed by ligand-bound polyphosphate kinase 2 structures.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
1EH8
DownloadVisualize
BU of 1eh8 by Molmil
BENZYLATED HUMAN O6-ALKYLGUANINE-DNA ALKYLTRANSFERASE
分子名称: O6-ALKYLGUANINE-DNA ALKYLTRANSFERASE, ZINC ION
著者Daniels, D.S, Tainer, J.A.
登録日2000-02-18
公開日2000-04-12
最終更新日2023-08-09
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Active and alkylated human AGT structures: a novel zinc site, inhibitor and extrahelical base binding.
EMBO J., 19, 2000
1EHG
DownloadVisualize
BU of 1ehg by Molmil
CRYSTAL STRUCTURES OF CYTOCHROME P450NOR AND ITS MUTANTS (SER286 VAL, THR) IN THE FERRIC RESTING STATE AT CRYOGENIC TEMPERATURE: A COMPARATIVE ANALYSIS WITH MONOOXYGENASE CYTOCHROME P450S
分子名称: CYTOCHROME P450NOR, PROTOPORPHYRIN IX CONTAINING FE
著者Shimizu, H, Park, S.
登録日2000-02-21
公開日2000-08-21
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structures of cytochrome P450nor and its mutants (Ser286-->Val, Thr) in the ferric resting state at cryogenic temperature: a comparative analysis with monooxygenase cytochrome P450s.
J.Inorg.Biochem., 81, 2000

243911

件を2025-10-29に公開中

PDB statisticsPDBj update infoContact PDBjnumon