Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

3G3J
DownloadVisualize
BU of 3g3j by Molmil
Crystal structure of the GluR6 ligand binding domain dimer I442H K494E K665R I749L Q753K mutant with glutamate and NaCl at 1.32 Angstrom resolution
分子名称: CHLORIDE ION, GLUTAMIC ACID, Glutamate receptor, ...
著者Chaudhry, C, Mayer, M.L.
登録日2009-02-02
公開日2009-06-02
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (1.321 Å)
主引用文献Stability of ligand-binding domain dimer assembly controls kainate receptor desensitization.
Embo J., 28, 2009
3G3G
DownloadVisualize
BU of 3g3g by Molmil
Crystal structure of the GluR6 ligand binding domain dimer K665R mutant with glutamate and NaCl at 1.3 Angstrom resolution
分子名称: CHLORIDE ION, GLUTAMIC ACID, Glutamate receptor, ...
著者Chaudhry, C, Mayer, M.L.
登録日2009-02-02
公開日2009-06-02
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (1.303 Å)
主引用文献Stability of ligand-binding domain dimer assembly controls kainate receptor desensitization.
Embo J., 28, 2009
3M9C
DownloadVisualize
BU of 3m9c by Molmil
Crystal structure of the membrane domain of respiratory complex I from Escherichia coli
分子名称: NADH-quinone oxidoreductase subunit NuoL, NADH-quinone oxidoreductase subunit NuoM, NADH-quinone oxidoreductase subunit NuoN, ...
著者Efremov, R.G, Baradaran, R, Sazanov, L.A.
登録日2010-03-22
公開日2010-05-26
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.9 Å)
主引用文献The architecture of respiratory complex I
Nature, 465, 2010
7KP7
DownloadVisualize
BU of 7kp7 by Molmil
asymmetric mTNF-alpha hTNFR1 complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, SULFATE ION, Tumor necrosis factor, ...
著者Arakaki, T.L, Fox III, D, Edwards, T.E, Foley, A, Ceska, T.
登録日2020-11-10
公開日2021-01-13
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献Structural insights into the disruption of TNF-TNFR1 signalling by small molecules stabilising a distorted TNF.
Nat Commun, 12, 2021
7KP8
DownloadVisualize
BU of 7kp8 by Molmil
asymmetric mTNF-alpha hTNFR1 complex
分子名称: 1-{[2-(difluoromethoxy)phenyl]methyl}-2-methyl-6-[6-(piperazin-1-yl)pyridin-3-yl]-1H-benzimidazole, Tumor necrosis factor, Tumor necrosis factor receptor superfamily member 1A
著者Arakaki, T.L, Fox III, D, Edwards, T.E, Foley, A, Ceska, T.
登録日2020-11-10
公開日2021-01-13
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.15 Å)
主引用文献Structural insights into the disruption of TNF-TNFR1 signalling by small molecules stabilising a distorted TNF.
Nat Commun, 12, 2021
6K1Z
DownloadVisualize
BU of 6k1z by Molmil
Crystal structure of farnesylated hGBP1
分子名称: FARNESYL, Guanylate-binding protein 1
著者Du, S, Xiao, J.Y.
登録日2019-05-13
公開日2019-06-12
最終更新日2019-12-25
実験手法X-RAY DIFFRACTION (2.307 Å)
主引用文献Structural mechanism for guanylate-binding proteins (GBPs) targeting by the Shigella E3 ligase IpaH9.8.
Plos Pathog., 15, 2019
5OOO
DownloadVisualize
BU of 5ooo by Molmil
Structure of the Rift Valley fever virus NSs protein core domain
分子名称: Non-structural protein NS-S
著者Barski, M.S, Potter, J.A, Schwarz-Linek, U.
登録日2017-08-08
公開日2017-08-16
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Rift Valley fever phlebovirus NSs protein core domain structure suggests molecular basis for nuclear filaments.
Elife, 6, 2017
3G3I
DownloadVisualize
BU of 3g3i by Molmil
Crystal structure of the GluR6 ligand binding domain dimer I442H K494E I749L Q753K mutant with glutamate and NaCl at 1.37 Angstrom resolution
分子名称: CHLORIDE ION, GLUTAMIC ACID, Glutamate receptor, ...
著者Chaudhry, C, Mayer, M.L.
登録日2009-02-02
公開日2009-06-02
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (1.371 Å)
主引用文献Stability of ligand-binding domain dimer assembly controls kainate receptor desensitization.
Embo J., 28, 2009
4JPN
DownloadVisualize
BU of 4jpn by Molmil
Bacteriophage phiX174 H protein residues 143-221
分子名称: Minor spike protein H
著者Sun, L, Young, L.N, Boudko, S.B, Fokine, A, Zhang, X, Rossmann, M.G, Fane, B.A.
登録日2013-03-19
公開日2013-12-11
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.101 Å)
主引用文献Icosahedral bacteriophage Phi X174 forms a tail for DNA transport during infection.
Nature, 505, 2014
4IOU
DownloadVisualize
BU of 4iou by Molmil
Crystal structure of the HIV-1 Vif binding, catalytically active domain of APOBEC3F
分子名称: DNA dC->dU-editing enzyme APOBEC-3F, ZINC ION
著者Bohn, M, Shandilya, S.M.D, Schiffer, C.A.
登録日2013-01-08
公開日2013-05-29
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.751 Å)
主引用文献Crystal Structure of the DNA Cytosine Deaminase APOBEC3F: The Catalytically Active and HIV-1 Vif-Binding Domain.
Structure, 21, 2013
4JPP
DownloadVisualize
BU of 4jpp by Molmil
Bacteriophage phiX174 H protein residues 143-282
分子名称: Minor spike protein H
著者Sun, L, Young, L.N, Boudko, S.B, Fokine, A, Zhang, X, Rossmann, M.G, Fane, B.A.
登録日2013-03-19
公開日2013-12-11
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Icosahedral bacteriophage Phi X174 forms a tail for DNA transport during infection.
Nature, 505, 2014
4CDB
DownloadVisualize
BU of 4cdb by Molmil
Crystal structure of listeriolysin O
分子名称: ACETATE ION, LISTERIOLYSIN O, SODIUM ION, ...
著者Koester, S, Yildiz, O.
登録日2013-10-30
公開日2014-04-23
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystal Structure of Listeriolysin O Reveals Molecular Details of Oligomerization and Pore Formation
Nat.Commun., 5, 2014
5ZAL
DownloadVisualize
BU of 5zal by Molmil
Cryo-EM structure of human Dicer and its complexes with a pre-miRNA substrate
分子名称: Endoribonuclease Dicer, RISC-loading complex subunit TARBP2, RNA (73-mer)
著者Liu, Z, Wang, J, Cheng, H, Ke, X, Sun, L, Zhang, Q.C, Wang, H.-W.
登録日2018-02-07
公開日2018-05-09
最終更新日2020-08-05
実験手法ELECTRON MICROSCOPY (4.7 Å)
主引用文献Cryo-EM Structure of Human Dicer and Its Complexes with a Pre-miRNA Substrate.
Cell, 173, 2018
1SUY
DownloadVisualize
BU of 1suy by Molmil
NMR structure of the ThKaiA180C-CIIABD complex (average minimized structure)
分子名称: circadian clock protein KaiA, circadian clock protein KaiC
著者Vakonakis, I, LiWang, A.C.
登録日2004-03-26
公開日2004-08-03
最終更新日2011-07-13
実験手法SOLUTION NMR
主引用文献Structure of the C-terminal domain of the clock protein KaiA in complex with a KaiC-derived peptide: implications for KaiC regulation.
Proc.Natl.Acad.Sci.Usa, 101, 2004
6DMH
DownloadVisualize
BU of 6dmh by Molmil
A multiconformer ligand model of acylenzyme intermediate of meropenem bound to an SFC-1 E166A mutant
分子名称: (4R,5S)-3-{[(3S,5S)-5-(dimethylcarbamoyl)pyrrolidin-3-yl]sulfanyl}-5-[(2S,3R)-3-hydroxy-1-oxobutan-2-yl]-4-methyl-4,5-d ihydro-1H-pyrrole-2-carboxylic acid, 1,2-ETHANEDIOL, Beta-lactamase
著者Hudson, B.M, van Zundert, G, Keedy, D.A, Fonseca, R, Heliou, A, Suresh, P, Borrelli, K, Day, T, Fraser, J.S, van den Bedem, H.
登録日2018-06-05
公開日2018-12-19
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献qFit-ligand Reveals Widespread Conformational Heterogeneity of Drug-Like Molecules in X-Ray Electron Density Maps.
J. Med. Chem., 61, 2018
7C7E
DownloadVisualize
BU of 7c7e by Molmil
Crystal structure of C terminal domain of Escherichia coli DgoR
分子名称: Putative DNA-binding transcriptional regulator, SULFATE ION, TRIETHYLENE GLYCOL, ...
著者Lin, W.
登録日2020-05-25
公開日2021-01-20
実験手法X-RAY DIFFRACTION (2.047 Å)
主引用文献Structural and Functional Analyses of the Transcription Repressor DgoR From Escherichia coli Reveal a Divalent Metal-Containing D-Galactonate Binding Pocket.
Front Microbiol, 11, 2020
4WMJ
DownloadVisualize
BU of 4wmj by Molmil
Colias eurytheme Phosphoglucose isomerase. Homodimer from 4-5(18) genotype.
分子名称: Glucose-6-phosphate isomerase
著者Hill, J.A, Watt, W.B.
登録日2014-10-09
公開日2015-10-14
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure and Function of Phosphoglucose Isomerase In Colias Eurytheme
Thesis, Stanford University, 2013
1EVW
DownloadVisualize
BU of 1evw by Molmil
L116A MUTANT OF THE HOMING ENDONUCLEASE I-PPOI COMPLEXED TO HOMING SITE DNA.
分子名称: DNA (5'-D(*TP*GP*AP*CP*TP*CP*TP*CP*TP*TP*AP*A)-3'), DNA (5'-D(*TP*GP*GP*CP*TP*AP*CP*CP*TP*TP*AP*A)-3'), DNA (5'-D(P*GP*AP*GP*AP*GP*TP*CP*A)-3'), ...
著者Galburt, E.A, Jurica, M.S, Chevalier, B.S, Erho, D, Stoddard, B.L.
登録日2000-04-20
公開日2000-08-03
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Conformational changes and cleavage by the homing endonuclease I-PpoI: a critical role for a leucine residue in the active site.
J.Mol.Biol., 300, 2000
1WPL
DownloadVisualize
BU of 1wpl by Molmil
Crystal structure of the inhibitory form of rat GTP cyclohydrolase I/GFRP complex
分子名称: 7,8-DIHYDROBIOPTERIN, GTP cyclohydrolase I, GTP cyclohydrolase I feedback regulatory protein, ...
著者Maita, N, Hatakeyama, K, Okada, K, Hakoshima, T.
登録日2004-09-08
公開日2004-09-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural basis of biopterin-induced inhibition of GTP cyclohydrolase I by GFRP, its feedback regulatory protein
J.Biol.Chem., 279, 2004
7C4P
DownloadVisualize
BU of 7c4p by Molmil
Crystal structure of DBD plasma treated zebrafish TRF2 myb-domain complexed with DNA
分子名称: DNA (5'-D(*CP*CP*CP*TP*AP*AP*CP*CP*CP*TP*AP*A)-3'), DNA (5'-D(*TP*TP*AP*GP*GP*GP*TP*TP*AP*G)-3'), DNA (5'-D(*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*G)-3'), ...
著者Jin, Z, Park, J.H, Yun, J.H, Park, S.Y, Lee, W.
登録日2020-05-18
公開日2021-05-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.995 Å)
主引用文献Crystal structure of DBD plasma treated zebrafish TRF2 myb-domain complexed with DNA
To Be Published
7C4R
DownloadVisualize
BU of 7c4r by Molmil
Crystal structure of hydrogen peroxide treated zebrafish TRF2 complexed with DNA
分子名称: DNA (5'-D(*D*CP*DP*CP*DP*CP*DP*TP*DP*AP*DP*AP*DP*CP*DP*CP*DP*CP*DP*TP*DP*AP*DP*A)-3'), DNA (5'-D(*D*TP*DP*TP*DP*AP*DP*GP*DP*GP*DP*GP*DP*TP*DP*TP*DP*AP*DP*G)-3'), DNA (5'-D(*D*TP*DP*TP*DP*AP*DP*GP*DP*GP*DP*GP*DP*TP*DP*TP*DP*AP*DP*GP*DP*GP*DP*G)-3'), ...
著者Jin, Z, Park, J.H, Yun, J.H, Park, S.Y, Lee, W.
登録日2020-05-18
公開日2021-05-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.44 Å)
主引用文献Crystal structure of hydrogen peroxide treated zebrafish TRF2 myb-domain complexed with DNA
To Be Published
7C4Q
DownloadVisualize
BU of 7c4q by Molmil
Crystal structure of DBD plasma treated zebrafish TRF2 myb-domain complexed with DNA
分子名称: DNA (5'-D(*CP*CP*CP*TP*AP*AP*CP*CP*CP*TP*AP*A)-3'), DNA (5'-D(*TP*TP*AP*GP*GP*GP*TP*TP*AP*G)-3'), DNA (5'-D(*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*G)-3'), ...
著者Jin, Z, Park, J.H, Yun, J.H, Park, S.Y, Lee, W.
登録日2020-05-18
公開日2021-05-26
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of DBD plasma treated zebrafish TRF2 myb-domain complexed with DNA
To Be Published
1EVX
DownloadVisualize
BU of 1evx by Molmil
APO CRYSTAL STRUCTURE OF THE HOMING ENDONUCLEASE, I-PPOI
分子名称: INTRON-ENCODED HOMING ENDONUCLEASE I-PPOI, SULFATE ION, ZINC ION
著者Galburt, E.A, Jurica, M.S, Chevalier, B.S, Erho, D, Stoddard, B.L.
登録日2000-04-20
公開日2000-08-02
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Conformational changes and cleavage by the homing endonuclease I-PpoI: a critical role for a leucine residue in the active site.
J.Mol.Biol., 300, 2000
5ZR2
DownloadVisualize
BU of 5zr2 by Molmil
Crystal Structure of Phosphoserine Phosphatase Mutant (H9A) from Entamoeba histolytica in complex with Phosphoserine
分子名称: DI(HYDROXYETHYL)ETHER, PHOSPHOSERINE, Phosphoglycerate mutase family protein, ...
著者Kumari, P, Gourinath, S.
登録日2018-04-23
公開日2019-04-24
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.95 Å)
主引用文献Structural and functional characterisation of phosphoserine phosphatase, that plays critical role in the oxidative stress response in the parasite Entamoeba histolytica.
J.Struct.Biol., 206, 2019
1IS7
DownloadVisualize
BU of 1is7 by Molmil
Crystal structure of rat GTPCHI/GFRP stimulatory complex
分子名称: GTP Cyclohydrolase I, GTP Cyclohydrolase I Feedback Regulatory Protein, PHENYLALANINE, ...
著者Maita, N, Okada, K, Hatakeyama, K, Hakoshima, T.
登録日2001-11-18
公開日2002-02-20
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of the stimulatory complex of GTP cyclohydrolase I and its feedback regulatory protein GFRP.
Proc.Natl.Acad.Sci.USA, 99, 2002

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon