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6LEU
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BU of 6leu by Molmil
Quadruple mutant (N51I+C59R+S108N+I164L) plasmodium falciparum dihydrofolate reductase-thymidylate synthase (PfDHFR-TS) complexed with compound 42 and NADPH
分子名称: 1-[3-[(4-chlorophenyl)-(phenylmethyl)amino]propoxy]-6,6-dimethyl-1,3,5-triazine-2,4-diamine, 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, Bifunctional dihydrofolate reductase-thymidylate synthase, ...
著者Vanichtanankul, J, Vitsupakorn, D.
登録日2019-11-27
公開日2020-12-02
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.59 Å)
主引用文献Flexible diaminodihydrotriazine inhibitors of Plasmodium falciparum dihydrofolate reductase: Binding strengths, modes of binding and their antimalarial activities.
Eur.J.Med.Chem., 195, 2020
5CVI
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BU of 5cvi by Molmil
Structure of the manganese regulator SloR
分子名称: 1,2-ETHANEDIOL, SloR, ZINC ION
著者Nye, D, Glasfeld, A.
登録日2015-07-27
公開日2015-08-12
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.804 Å)
主引用文献SloR structure and DNA binding studies inform the SloR-SRE interaction in Streptococcus mutans
to be published
5WNG
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BU of 5wng by Molmil
X-RAY CO-STRUCTURE OF RHO-ASSOCIATED PROTEIN KINASE (ROCK1) WITH A HIGHLY SELECTIVE INHIBITOR
分子名称: (2R)-N-(3-cyanophenyl)-2-(3-{[(6S)-6-(dimethylamino)-4,5,6,7-tetrahydro-1,3-benzothiazol-2-yl]carbamoyl}phenyl)pyrrolidine-1-carboxamide, Rho-associated protein kinase 1
著者Li, X.
登録日2017-07-31
公開日2018-08-01
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Novel mechanism of Rho kinase selectivity: beyond the ATP pocket
To Be Published
6UBO
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BU of 6ubo by Molmil
Fluorogen Activating Protein Dib1
分子名称: 12-(diethylamino)-2,2-bis(fluoranyl)-4,5-dimethyl-5-aza-3-azonia-2-boranuidatricyclo[7.4.0.0^{3,7}]trideca-1(13),3,7,9,11-pentaen-6-one, CITRIC ACID, Outer membrane lipoprotein Blc, ...
著者Muslinkina, L, Pletneva, N, Pletnev, V.Z, Pletnev, S.
登録日2019-09-12
公開日2020-09-16
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Structure-Based Rational Design of Two Enhanced Bacterial Lipocalin Blc Tags for Protein-PAINT Super-resolution Microscopy.
Acs Chem.Biol., 15, 2020
6EUD
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BU of 6eud by Molmil
Crystal structure of E. coli DExH-box NTPase HrpB
分子名称: 1,2-ETHANEDIOL, ATP-dependent RNA helicase HrpB
著者Pietrzyk-Brzezinska, A.J, Wahl, M.C.
登録日2017-10-30
公開日2018-09-12
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal Structure of the Escherichia coli DExH-Box NTPase HrpB.
Structure, 26, 2018
6UBV
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BU of 6ubv by Molmil
The structure of the Streptococcus gordonii surface protein SspB in complex with TEV peptide provides clues to the adherence of oral streptococcal adherence to salivary agglutinin
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, N-(3,4-dihydroxyphenyl)-N'-[2-(3,4-dihydroxyphenyl)ethyl]urea, ...
著者Schormann, N, Deivanayagam, C.
登録日2019-09-13
公開日2020-09-16
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献The structure of the Streptococcus gordonii surface protein SspB in complex with TEV peptide provides clues to the adherence of oral streptococcal adherence to salivary agglutinin
To Be Published
7FBY
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BU of 7fby by Molmil
Crystal Structure of PH0140 from Pyrococcus horikosii OT3
分子名称: 1,2-ETHANEDIOL, ISOLEUCINE, Transcriptional regulatory protein
著者Richard, M, Ahmad, M, Pal, R.K, Biswal, B.K, Jeyakanthan, J.
登録日2021-07-13
公開日2022-07-20
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.001 Å)
主引用文献Crystal Structure of PH0140 from Pyrococcus horikosii OT3
To Be Published
8S6V
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BU of 8s6v by Molmil
Crystal structure of Fab-2D9 chimera complexed to a bis-Tn glycopeptide
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-alpha-D-galactopyranose, 2D9 (VL-CL), ...
著者Hurtado-Guerrero, R, Macias-Leon, J, Gonzalez-Ramirez, A.
登録日2024-02-28
公開日2025-06-25
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Recognizing Tn and STn Epitopes in Protein Context: Structural Advances in Phage Display Libraries for Tumor-Specific Antibody Discovery
Nat.Chem.Biol., 2025
8WZY
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BU of 8wzy by Molmil
A novel amidohydrolase
分子名称: 1,2-ETHANEDIOL, Dihydroorotase, ZINC ION
著者Feng, R, Ma, D.
登録日2023-11-02
公開日2024-11-13
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献A novel amidohydrolase catalyzes the degradation of polyacrylamide by Klebsiella sp. PCX
To Be Published
6EY4
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BU of 6ey4 by Molmil
Periplasmic domain (residues 36-513) of GldM
分子名称: 1,2-ETHANEDIOL, GldM
著者Leone, P, Roche, J, Cambillau, C, Roussel, A.
登録日2017-11-10
公開日2018-02-07
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Type IX secretion system PorM and gliding machinery GldM form arches spanning the periplasmic space.
Nat Commun, 9, 2018
5T27
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BU of 5t27 by Molmil
mPI3Kd IN COMPLEX WITH 5d
分子名称: 3-(benzotriazol-1-yl)-5-[1-methyl-5-[(1~{S})-1-morpholin-4-ylethyl]-1,2,4-triazol-3-yl]pyrazin-2-amine, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform
著者Petersen, J, Terstige, I, Perry, M, Svensson, T, Tyrchan, C, Lindmark, H, Oster, L.
登録日2016-08-23
公開日2017-04-19
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Discovery of triazole aminopyrazines as a highly potent and selective series of PI3K delta inhibitors.
Bioorg. Med. Chem. Lett., 27, 2017
6UEE
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BU of 6uee by Molmil
Pseudomonas aeruginosa LpxA Complex Structure with Ligand
分子名称: 4-(naphthalen-1-yl)-4-oxobutanoic acid, Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, GLYCEROL
著者Chen, Y, Kroeck, K, Sacco, M.
登録日2019-09-20
公開日2019-11-13
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Discovery of dual-activity small-molecule ligands of Pseudomonas aeruginosa LpxA and LpxD using SPR and X-ray crystallography.
Sci Rep, 9, 2019
5CZD
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BU of 5czd by Molmil
The complex structure of VinK with VinL
分子名称: 1,1'-ethane-1,2-diyldipyrrolidine-2,5-dione, 4'-PHOSPHOPANTETHEINE, Acyl-carrier-protein, ...
著者Miyanaga, A, Iwasawa, S, Shinohara, Y, Kudo, F, Eguchi, T.
登録日2015-07-31
公開日2016-02-03
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.34 Å)
主引用文献Structure-based analysis of the molecular interactions between acyltransferase and acyl carrier protein in vicenistatin biosynthesis.
Proc.Natl.Acad.Sci.USA, 113, 2016
7FAN
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BU of 7fan by Molmil
Co-crystal Structure of Toxoplasma gondii Prolyl tRNA Synthetase (TgPRS) in complex with T35 and L-pro
分子名称: 4-[(3S)-3-cyano-3-(1-methylcyclopropyl)-2-oxidanylidene-pyrrolidin-1-yl]-N-[[3-fluoranyl-5-(1-methylpyrazol-4-yl)phenyl]methyl]-6-methyl-pyridine-2-carboxamide, PROLINE, Prolyl-tRNA synthetase (ProRS)
著者Mishra, S, Malhotra, N, Yogavel, M, Sharma, A.
登録日2021-07-06
公開日2022-09-28
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.769 Å)
主引用文献Targeting prolyl-tRNA synthetase via a series of ATP-mimetics to accelerate drug discovery against toxoplasmosis.
Plos Pathog., 19, 2023
9JB0
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BU of 9jb0 by Molmil
Cryo-EM structure of the class II amyloid-beta 42 fibril containing a D-Asp at position 23
分子名称: Amyloid-beta precursor protein
著者Hsiao, L.C, Lee, C.H, Hsu, M.F, Hsu, S.T.
登録日2024-08-26
公開日2025-03-26
最終更新日2025-04-09
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Impacts of D-aspartate on the Aggregation Kinetics and Structural Polymorphism of Amyloid beta Peptide 1-42.
J.Mol.Biol., 437, 2025
2AOA
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BU of 2aoa by Molmil
Crystal structures of a high-affinity macrocyclic peptide mimetic in complex with the Grb2 SH2 domain
分子名称: 2-(4-((9S,10S,14S,Z)-18-(2-AMINO-2-OXOETHYL)-9-(CARBOXYMETHYL)-14-(NAPHTHALEN-1-YLMETHYL)-8,17,20-TRIOXO-7,16,19-TRIAZASPIRO[5.14]ICOS-11-EN-10-YL)PHENYL)MALONIC ACID, 3,6,9,12,15,18-HEXAOXAICOSANE-1,20-DIOL, Growth factor receptor-bound protein 2
著者Phan, J, Shi, Z.D, Burke, T.R, Waugh, D.S.
登録日2005-08-12
公開日2005-10-04
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Crystal Structures of a High-affinity Macrocyclic Peptide Mimetic in Complex with the Grb2 SH2 Domain.
J.Mol.Biol., 353, 2005
4AN9
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BU of 4an9 by Molmil
Crystal structures of human MEK1 with carboxamide-based allosteric inhibitor XL518 (GDC-0973), or related analogs.
分子名称: DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 1, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ...
著者Rice, K.D, Aay, N, Anand, N.K, Blazey, C.M, Bowles, O.J, Bussenius, J, Costanzo, S, Curtis, J.K, Defina, S.C, Dubenko, L, Engst, S, Joshi, A.A, Kennedy, A.R, Kim, A.I, Koltun, E.S, Lougheed, J.C, Manalo, J.C.L, Martini, J.F, Nuss, J.M, Peto, C.J, Tsang, T.H, Yu, P, Johnston, S.
登録日2012-03-16
公開日2012-12-19
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Novel Carboxamide-Based Allosteric Mek Inhibitors: Discovery and Optimization Efforts Toward Xl518 (Gdc-0973)
Acs Med.Chem.Lett., 3, 2012
4RCF
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BU of 4rcf by Molmil
Crystal structure of BACE1 in complex with 2-aminooxazoline 4-fluoroxanthene inhibitor 49
分子名称: (4S)-2'-(3,6-dihydro-2H-pyran-4-yl)-4'-fluoro-7'-(2-fluoropyridin-3-yl)spiro[1,3-oxazole-4,9'-xanthen]-2-amine, Beta-secretase 1, GLYCEROL, ...
著者Whittington, D.A, Long, A.M.
登録日2014-09-15
公開日2014-12-24
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Lead Optimization and Modulation of hERG Activity in a Series of Aminooxazoline Xanthene beta-Site Amyloid Precursor Protein Cleaving Enzyme (BACE1) Inhibitors.
J.Med.Chem., 57, 2014
7V4A
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BU of 7v4a by Molmil
Heparin-induced alpha-synuclein fibrils polymorph 1
分子名称: Alpha-synuclein
著者Tao, Y.Q, Sun, Y.P, Liu, C, Li, D.
登録日2021-08-12
公開日2022-08-17
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Heparin-induced alpha-synuclein fibrils polymorph 1
To Be Published
9EV8
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BU of 9ev8 by Molmil
Non-uniform refinement of the CryoEM structure of DeCLIC nanodisc with 10mM calcium
分子名称: 1,2-DIPALMITOYL-SN-GLYCERO-3-PHOSPHATE, CALCIUM ION, DECANE, ...
著者Fan, C, Howard, R.J, Lindahl, E.
登録日2024-03-28
公開日2025-04-09
実験手法ELECTRON MICROSCOPY (2.06 Å)
主引用文献Calcium stabilization of a flexible N-terminal domain in a pentameric ligand-gated ion channel
To Be Published
5WMA
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BU of 5wma by Molmil
N-terminal bromodomain of BRD4 in complex with PLX5981
分子名称: 1,2-ETHANEDIOL, 5-(3,5-dimethyl-1,2-oxazol-4-yl)-1H-pyrrolo[2,3-b]pyridine, Bromodomain-containing protein 4
著者Zhang, Y.
登録日2017-07-28
公開日2018-08-01
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.401 Å)
主引用文献BRD4 Profiling Identifies Critical Chronic Lymphocytic Leukemia Oncogenic Circuits and Reveals Sensitivity to PLX51107, a Novel Structurally Distinct BET Inhibitor.
Cancer Discov, 8, 2018
7FEH
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BU of 7feh by Molmil
Crystal structure of human DDR1 in complex with CH5541127
分子名称: Epithelial discoidin domain-containing receptor 1, N-[(5-chloranyl-2-ethylsulfonyl-phenyl)methyl]-3-piperazin-1-yl-5-(trifluoromethyloxy)benzamide, NITRATE ION
著者Fukami, T.A, Kadono, S, Matsuura, T.
登録日2021-07-20
公開日2022-07-27
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.61 Å)
主引用文献Novel potent and highly selective DDR1 inhibitors from integrated lead finding
Medicinal Chemistry Research, 32, 2023
5T23
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BU of 5t23 by Molmil
PI3Kg IN COMPLEX WITH 5d
分子名称: 3-(benzotriazol-1-yl)-5-[1-methyl-5-[(1~{S})-1-morpholin-4-ylethyl]-1,2,4-triazol-3-yl]pyrazin-2-amine, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform
著者Petersen, J, Terstige, I, Perry, M, Svensson, T, Tyrchan, C, Lindmark, H, Oster, L.
登録日2016-08-23
公開日2017-04-19
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.78 Å)
主引用文献Discovery of triazole aminopyrazines as a highly potent and selective series of PI3K delta inhibitors.
Bioorg. Med. Chem. Lett., 27, 2017
5T2B
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BU of 5t2b by Molmil
mPI3Kd IN COMPLEX WITH 5e
分子名称: 5-[1-methyl-5-(1-phenylcyclopropyl)-1,2,4-triazol-3-yl]-3-(1~{H}-pyrazol-4-yl)pyrazin-2-amine, Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit delta isoform
著者Petersen, J, Terstige, I, Perry, M, Svensson, T, Tyrchan, C, Lindmark, H, Oster, L.
登録日2016-08-23
公開日2017-04-19
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Discovery of triazole aminopyrazines as a highly potent and selective series of PI3K delta inhibitors.
Bioorg. Med. Chem. Lett., 27, 2017
6U9R
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BU of 6u9r by Molmil
MLL1 SET N3861I/Q3867L bound to inhibitor 12 (TC-5140)
分子名称: 5'-{[(3S)-3-amino-3-carboxypropyl]({1-[(3-chlorophenyl)methyl]azetidin-3-yl}methyl)amino}-5'-deoxyadenosine, Histone-lysine N-methyltransferase, ZINC ION
著者Petrunak, E.M, Stuckey, J.A.
登録日2019-09-09
公開日2020-07-01
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Discovery of Potent Small-Molecule Inhibitors of MLL Methyltransferase.
Acs Med.Chem.Lett., 11, 2020

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