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7AC1
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Solution structure of the TAF4-RST domain
分子名称: Transcription initiation factor TFIID subunit 4
著者Staby, L, Davidsen, R, Bugge, K, Skriver, K, Kragelund, B.B.
登録日2020-09-09
公開日2021-10-06
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献alpha alpha-hub coregulator structure and flexibility determine transcription factor binding and selection in regulatory interactomes.
J.Biol.Chem., 298, 2022
6YJ6
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Structure of the TFIIIC subcomplex tauA
分子名称: Transcription factor tau 131 kDa subunit, Transcription factor tau 55 kDa subunit, Transcription factor tau 95 kDa subunit,Transcription factor tau 95 kDa subunit
著者Vorlaender, M.K, Muller, C.W.
登録日2020-04-02
公開日2020-09-16
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structure of the TFIIIC subcomplex tau A provides insights into RNA polymerase III pre-initiation complex formation.
Nat Commun, 11, 2020
5O7X
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CRYSTAL STRUCTURE OF S. CEREVISIAE CORE FACTOR AT 3.2A RESOLUTION
分子名称: MAGNESIUM ION, RNA polymerase I-specific transcription initiation factor RRN11, RNA polymerase I-specific transcription initiation factor RRN6, ...
著者Engel, C, Gubbey, T, Neyer, S, Sainsbury, S, Oberthuer, C, Baejen, C, Bernecky, C, Cramer, P.
登録日2017-06-09
公開日2017-08-02
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural Basis of RNA Polymerase I Transcription Initiation.
Cell, 169, 2017
7UIF
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Mediator-PIC Early (Core B)
分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ...
著者Gorbea Colon, J.J, Chen, S.-F, Tsai, K.L, Murakami, K.
登録日2022-03-29
公開日2023-02-15
最終更新日2023-03-08
実験手法ELECTRON MICROSCOPY (4.6 Å)
主引用文献Structural basis of a transcription pre-initiation complex on a divergent promoter.
Mol.Cell, 83, 2023
7UIO
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Mediator-PIC Early (Composite Model)
分子名称: ALANINE, ASPARTIC ACID, DNA (37-MER), ...
著者Gorbea Colon, J.J, Chen, S.-F, Tsai, K.L, Murakami, K.
登録日2022-03-29
公開日2023-03-01
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural basis of a transcription pre-initiation complex on a divergent promoter.
Mol.Cell, 83, 2023
7UIG
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Mediator-PIC Early (Mediator A)
分子名称: DNA-directed RNA polymerase II subunit RPB1, Mediator of RNA polymerase II transcription subunit 1, Mediator of RNA polymerase II transcription subunit 10, ...
著者Gorbea Colon, J.J, Chen, S.-F, Tsai, K.L, Murakami, K.
登録日2022-03-29
公開日2023-02-15
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (4.3 Å)
主引用文献Structural basis of a transcription pre-initiation complex on a divergent promoter.
Mol.Cell, 83, 2023
7UI9
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Core Mediator-PICearly (Copy A)
分子名称: DNA-directed RNA polymerase II subunit RPB1, DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, ...
著者Gorbea Colon, J.J, Chen, S.-F, Tsai, K.L, Murakami, K.
登録日2022-03-28
公開日2023-02-15
最終更新日2023-03-08
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Structural basis of a transcription pre-initiation complex on a divergent promoter.
Mol.Cell, 83, 2023
5OA1
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RNA polymerase I pre-initiation complex
分子名称: ALA-ALA-ALA-ALA-ALA-ALA-ALA-ALA-ALA, ALA-ALA-ALA-ALA-ALA-ALA-ALA-ALA-ALA-ALA, ALA-ALA-ALA-ALA-ALA-ALA-ALA-ALA-ALA-ALA-ALA-ALA, ...
著者Sadian, Y, Tafur, L, Kosinski, J, Jakobi, A.J, Muller, C.W.
登録日2017-06-20
公開日2017-07-26
最終更新日2018-10-24
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Structural insights into transcription initiation by yeast RNA polymerase I.
EMBO J., 36, 2017
2MH2
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Structural insights into the DNA recognition and protein interaction domains reveal fundamental homologous DNA pairing properties of HOP2
分子名称: Homologous-pairing protein 2 homolog
著者Moktan, H, Guiraldelli, M.F, Eyter, C.A, Zhao, W, Camerini-Otero, R.D, Sung, P, Zhou, D.H, Pezza, R.J.
登録日2013-11-13
公開日2014-04-16
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution Structure and DNA-binding Properties of the Winged Helix Domain of the Meiotic Recombination HOP2 Protein.
J.Biol.Chem., 289, 2014
7AEX
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NRD-HEPN domains (N-terminal truncation) of Escherichia coli RnlA endoribonuclease
分子名称: mRNA endoribonuclease toxin LS
著者Garcia-Rodriguez, G, Loris, R.
登録日2020-09-18
公開日2021-06-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Alternative dimerization is required for activity and inhibition of the HEPN ribonuclease RnlA.
Nucleic Acids Res., 49, 2021
7AMV
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Atomic structure of the poxvirus transcription pre-initiation complex in the initially melted state
分子名称: ATP-dependent helicase VETFS, DNA-directed RNA polymerase, DNA-directed RNA polymerase 147 kDa polypeptide, ...
著者Grimm, C, Bartuli, J, Fischer, U.
登録日2020-10-09
公開日2021-10-06
最終更新日2021-10-20
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Structural basis of the complete poxvirus transcription initiation process.
Nat.Struct.Mol.Biol., 28, 2021
7AOF
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Atomic structure of the poxvirus transcription late pre-initiation complex
分子名称: DNA-directed RNA polymerase, DNA-directed RNA polymerase 147 kDa polypeptide, DNA-directed RNA polymerase 18 kDa subunit, ...
著者Grimm, C, Bartuli, J, Fischer, U.
登録日2020-10-14
公開日2021-10-06
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (2.98 Å)
主引用文献Structural basis of the complete poxvirus transcription initiation process.
Nat.Struct.Mol.Biol., 28, 2021
7AOZ
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Atomic structure of the poxvirus transcription initiation complex in conformation 1
分子名称: DNA-directed RNA polymerase, DNA-directed RNA polymerase 147 kDa polypeptide, DNA-directed RNA polymerase 18 kDa subunit, ...
著者Grimm, C, Bartuli, J, Fischer, U.
登録日2020-10-15
公開日2021-10-06
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (2.85 Å)
主引用文献Structural basis of the complete poxvirus transcription initiation process.
Nat.Struct.Mol.Biol., 28, 2021
7AP8
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Atomic structure of the poxvirus initially transcribing complex in conformation 2
分子名称: DNA-directed RNA polymerase, DNA-directed RNA polymerase 147 kDa polypeptide, DNA-directed RNA polymerase 18 kDa subunit, ...
著者Grimm, C, Bartuli, J, Fischer, U.
登録日2020-10-16
公開日2021-10-06
最終更新日2021-10-20
実験手法ELECTRON MICROSCOPY (3.15 Å)
主引用文献Structural basis of the complete poxvirus transcription initiation process.
Nat.Struct.Mol.Biol., 28, 2021
7AOH
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BU of 7aoh by Molmil
Atomic structure of the poxvirus late initially transcribing complex
分子名称: DNA-directed RNA polymerase, DNA-directed RNA polymerase 147 kDa polypeptide, DNA-directed RNA polymerase 18 kDa subunit, ...
著者Grimm, C, Bartuli, J, Fischer, U.
登録日2020-10-14
公開日2021-10-06
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Structural basis of the complete poxvirus transcription initiation process.
Nat.Struct.Mol.Biol., 28, 2021
7AP9
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Atomic structure of the poxvirus initially transcribing complex in conformation 3
分子名称: DNA-directed RNA polymerase, DNA-directed RNA polymerase 147 kDa polypeptide, DNA-directed RNA polymerase 18 kDa subunit, ...
著者Grimm, C, Bartuli, J, Fischer, U.
登録日2020-10-16
公開日2021-10-06
最終更新日2024-10-16
実験手法ELECTRON MICROSCOPY (3.01 Å)
主引用文献Structural basis of the complete poxvirus transcription initiation process.
Nat.Struct.Mol.Biol., 28, 2021
6A4J
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Crystal structure of Thioredoxin reductase 2 from Staphylococcus aureus
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Ferredoxin--NADP reductase
著者Bose, M, Bhattacharyya, S, Ghosh, A.K, Das, A.K.
登録日2018-06-20
公開日2018-07-11
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Elucidation of the mechanism of disulfide exchange between staphylococcal thioredoxin2 and thioredoxin reductase2: A structural insight.
Biochimie, 160, 2019
3ALQ
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BU of 3alq by Molmil
Crystal structure of TNF-TNFR2 complex
分子名称: COBALT (II) ION, Tumor necrosis factor, Tumor necrosis factor receptor superfamily member 1B
著者Mukai, Y, Nakamura, T, Yamagata, Y, Tsutsumi, Y.
登録日2010-08-06
公開日2010-11-17
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Solution of the Structure of the TNF-TNFR2 Complex
Sci.Signal., 3, 2010
4N7H
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BU of 4n7h by Molmil
Crystal Structure of the Complex of 3rd WW domain of Human Nedd4 and 1st PPXY Motif of ARRDC3
分子名称: Arrestin domain-containing protein 3, E3 ubiquitin-protein ligase NEDD4, GUANIDINE
著者Qi, S, O'Hayre, M, Gutkind, J.S, Hurley, J.
登録日2013-10-15
公開日2014-01-08
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.698 Å)
主引用文献Structural and biochemical basis for ubiquitin ligase recruitment by arrestin-related domain-containing protein-3 (ARRDC3).
J.Biol.Chem., 289, 2014
2DVW
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BU of 2dvw by Molmil
Structure of the Oncoprotein Gankyrin in Complex with S6 ATPase of the 26S Proteasome
分子名称: 26S protease regulatory subunit 6B, 26S proteasome non-ATPase regulatory subunit 10
著者Yokoyama, S, Padmanabhan, B, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-08-01
公開日2007-03-13
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of the Oncoprotein Gankyrin in Complex with S6 ATPase of the 26S Proteasome
Structure, 15, 2007
5A5B
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BU of 5a5b by Molmil
Structure of the 26S proteasome-Ubp6 complex
分子名称: 26S PROTEASE REGULATORY SUBUNIT 4 HOMOLOG, 26S PROTEASE REGULATORY SUBUNIT 6A, 26S PROTEASE REGULATORY SUBUNIT 6B HOMOLOG, ...
著者Aufderheide, A, Beck, F, Stengel, F, Hartwig, M, Schweitzer, A, Pfeifer, G, Goldberg, A.L, Sakata, E, Baumeister, W, Foerster, F.
登録日2015-06-17
公開日2015-07-22
最終更新日2017-08-30
実験手法ELECTRON MICROSCOPY (9.5 Å)
主引用文献Structural Characterization of the Interaction of Ubp6 with the 26S Proteasome.
Proc.Natl.Acad.Sci.USA, 112, 2015
5C13
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BU of 5c13 by Molmil
Crystal Structure of TAF3 PHD finger bound to histone H3C4me3 peptide
分子名称: H3 peptide, Transcription initiation factor TFIID subunit 3, ZINC ION
著者Li, H, Huang, J.
登録日2015-06-12
公開日2015-11-25
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.101 Å)
主引用文献Crystal Structure of Jarid1a PHD finger bound to histone H3C4me3 peptide
Nat Commun, 2015
1GUX
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BU of 1gux by Molmil
RB POCKET BOUND TO E7 LXCXE MOTIF
分子名称: ONCOPROTEIN, RETINOBLASTOMA PROTEIN
著者Lee, J.O, Russo, A.A, Pavletich, N.P.
登録日1997-11-15
公開日1998-12-02
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure of the retinoblastoma tumour-suppressor pocket domain bound to a peptide from HPV E7.
Nature, 391, 1998
1EQF
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BU of 1eqf by Molmil
CRYSTAL STRUCTURE OF THE DOUBLE BROMODOMAIN MODULE FROM HUMAN TAFII250
分子名称: RNA POLYMERASE II TRANSCRIPTION INITIATION FACTOR, SULFATE ION
著者Jacobson, R.H, Ladurner, A.G, King, D.S, Tjian, R.
登録日2000-04-04
公開日2000-06-07
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structure and function of a human TAFII250 double bromodomain module.
Science, 288, 2000
2PHG
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Model for VP16 binding to TFIIB
分子名称: Alpha trans-inducing protein, Transcription initiation factor IIB
著者Jonker, H.R.A, Wechselberger, R.W, Boelens, R, Folkers, G.E, Kaptein, R.
登録日2007-04-11
公開日2007-04-24
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structural Properties of the Promiscuous VP16 Activation Domain
Biochemistry, 44, 2005

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