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6U2H
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BU of 6u2h by Molmil
BRAF dimer bound to 14-3-3
分子名称: 14-3-3 protein zeta/delta, 2-{4-[(1E)-1-(hydroxyimino)-2,3-dihydro-1H-inden-5-yl]-3-(pyridin-4-yl)-1H-pyrazol-1-yl}ethanol, Serine/threonine-protein kinase B-raf
著者Liau, N.P.D, Hymowitz, S.G, Sudhamsu, J.
登録日2019-08-19
公開日2019-08-28
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Negative regulation of RAF kinase activity by ATP is overcome by 14-3-3-induced dimerization.
Nat.Struct.Mol.Biol., 27, 2020
6U34
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BU of 6u34 by Molmil
Binary complex of native hAChE with oxime reactivator RS194B
分子名称: (2E)-N-[2-(azepan-1-yl)ethyl]-2-(hydroxyimino)acetamide, Acetylcholinesterase, GLYCEROL, ...
著者Kovalevsky, A, Gerlits, O, Radic, Z.
登録日2019-08-21
公開日2020-02-12
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Rational design, synthesis, and evaluation of uncharged, "smart" bis-oxime antidotes of organophosphate-inhibited human acetylcholinesterase.
J.Biol.Chem., 295, 2020
3JYR
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BU of 3jyr by Molmil
Crystal structures of the GacH receptor of Streptomyces glaucescens GLA.O in the unliganded form and in complex with acarbose and an acarbose homolog. Comparison with acarbose-loaded maltose binding protein of Salmonella typhimurium.
分子名称: 4,6-dideoxy-4-{[(1S,4R,5S,6S)-4,5,6-trihydroxy-3-(hydroxymethyl)cyclohex-2-en-1-yl]amino}-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose, Maltose-binding periplasmic protein
著者Vahedi-Faridi, A, Licht, A, Bulut, H, Schneider, E.
登録日2009-09-22
公開日2010-02-16
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Crystal Structures of the Solute Receptor GacH of Streptomyces glaucescens in Complex with Acarbose and an Acarbose Homolog: Comparison with the Acarbose-Loaded Maltose-Binding Protein of Salmonella typhimurium.
J.Mol.Biol., 397, 2010
5F6D
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BU of 5f6d by Molmil
Crystal structure of Ubc9 (K48A/K49A/E54A) complexed with Fragment 6
分子名称: 6~{H}-benzo[c][1,2]benzothiazine 5,5-dioxide, SUMO-conjugating enzyme UBC9
著者Lountos, G.T, Hewitt, W.M, Zlotkowski, K, Dahlhauser, S, Saunders, L.B, Needle, D, Tropea, J.E, Zhan, C, Wei, G, Ma, B, Nussinov, R, Schneekloth, J.S.Jr, Waugh, D.S.
登録日2015-12-05
公開日2016-04-27
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.553 Å)
主引用文献Insights Into the Allosteric Inhibition of the SUMO E2 Enzyme Ubc9.
Angew.Chem.Int.Ed.Engl., 55, 2016
7CDY
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BU of 7cdy by Molmil
Crystal structure of glucose dehydrogenase
分子名称: CALCIUM ION, GLYCEROL, glucose dehydrogenase
著者Jia, S, Xu, D, Wang, W, Ran, T.
登録日2020-06-21
公開日2021-06-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.329 Å)
主引用文献Structure of glucose dehydrogenase at 1.33 Angstroms
To Be Published
6FGG
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BU of 6fgg by Molmil
Crystal Structure of BAZ2A bromodomain in complex with 1-methylpyridinone compound 5
分子名称: Bromodomain adjacent to zinc finger domain protein 2A, ~{N}-[3-[2-(dimethylamino)ethyl]-2-oxidanylidene-1,3-benzoxazol-5-yl]-1-methyl-6-oxidanylidene-pyridine-3-carboxamide
著者Dalle Vedove, A, Spiliotopoulos, D, Lolli, G, Caflisch, A.
登録日2018-01-10
公開日2018-05-30
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Structural Analysis of Small-Molecule Binding to the BAZ2A and BAZ2B Bromodomains.
ChemMedChem, 13, 2018
6CA3
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BU of 6ca3 by Molmil
THE CRYSTAL STRUCTURE OF THE W169Y MUTANT OF ALPHA-GLUCOSIDASE (GH 31) FROM RUMINOCOCCUS OBEUM ATCC 29174 in complex with miglitol
分子名称: (2R,3R,4R,5S)-1-(2-hydroxyethyl)-2-(hydroxymethyl)piperidine-3,4,5-triol, GLYCEROL, Glycosyl hydrolase, ...
著者Tan, K, Tesar, C, Jedrzejczak, R, Joachimiak, A, Midwest Center for Macromolecular Research (MCMR)
登録日2018-01-29
公開日2018-02-28
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.743 Å)
主引用文献THE CRYSTAL STRUCTURE OF THE W169Y MUTANT OF ALPHA-GLUCOSIDASE (GH 31) FROM RUMINOCOCCUS OBEUM ATCC 29174 in complex with miglitol
To Be Published
7UYF
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BU of 7uyf by Molmil
Human PRMT5:MEP50 structure with Fragment 4 and MTA Bound
分子名称: 4-methyl-1,5-naphthyridin-2-amine, 5'-DEOXY-5'-METHYLTHIOADENOSINE, CHLORIDE ION, ...
著者Gunn, R.J, Lawson, J.D, Smith, C.R.
登録日2022-05-06
公開日2022-10-05
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.82 Å)
主引用文献Fragment optimization and elaboration strategies - the discovery of two lead series of PRMT5/MTA inhibitors from five fragment hits.
Rsc Med Chem, 13, 2022
4ABH
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BU of 4abh by Molmil
Fragments bound to bovine trypsin for the SAMPL challenge
分子名称: 1,2-ETHANEDIOL, 1-(3-PYRROLIDIN-1-YLPHENYL)METHANAMINE, CALCIUM ION, ...
著者Newman, J, Peat, T.S.
登録日2011-12-08
公開日2012-02-08
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献The Dingo Dataset: A Comprehensive Set of Data for the Sampl Challenge.
J.Comput.Aided Mol.Des., 26, 2012
6LPJ
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BU of 6lpj by Molmil
A2AR crystallized in EROCOC17+4, LCP-SFX at 277 K
分子名称: 4-{2-[(7-amino-2-furan-2-yl[1,2,4]triazolo[1,5-a][1,3,5]triazin-5-yl)amino]ethyl}phenol, Adenosine receptor A2a,Soluble cytochrome b562,Adenosine receptor A2a, CHOLESTEROL, ...
著者Ihara, K, Hato, M, Nakane, T, Yamashita, K, Kimura-Someya, T, Hosaka, T, Ishizuka-Katsura, Y, Tanaka, R, Tanaka, T, Sugahara, M, Hirata, K, Yamamoto, M, Nureki, O, Tono, K, Nango, E, Iwata, S, Shirouzu, M.
登録日2020-01-10
公開日2020-11-25
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Isoprenoid-chained lipid EROCOC 17+4 : a new matrix for membrane protein crystallization and a crystal delivery medium in serial femtosecond crystallography.
Sci Rep, 10, 2020
7UO0
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BU of 7uo0 by Molmil
E.coli RNaseP Holoenzyme with Mg2+
分子名称: CALCIUM ION, Precursor tRNA substrate G(-1) G(-2), RNase P RNA, ...
著者Huang, W, Taylor, D.J.
登録日2022-04-12
公開日2022-09-28
最終更新日2025-05-21
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural and mechanistic basis for recognition of alternative tRNA precursor substrates by bacterial ribonuclease P.
Nat Commun, 13, 2022
6M5U
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BU of 6m5u by Molmil
The coordinates of the monomeric terminase complex in the presence of the ADP-BeF3
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, ...
著者Yang, Y.X, Yang, P, Wang, N, Zhu, L, Zhou, Z.H, Rao, Z.H, Wang, X.X.
登録日2020-03-11
公開日2020-10-28
最終更新日2025-06-18
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Architecture of the herpesvirus genome-packaging complex and implications for DNA translocation.
Protein Cell, 11, 2020
7V3T
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BU of 7v3t by Molmil
Solution structure of thrombin binding aptamer G-quadruplex bound a self-adaptive small molecule with rotated ligands
分子名称: 11,13-bis(fluoranyl)-8-(1-methyl-3-pyridin-2-yl-imidazol-2-yl)-8-(1-methyl-3-pyridin-2-yl-imidazol-2-yl)-7$l^{4}-aza-8$l^{4}-platinatricyclo[7.4.0.0^{2,7}]trideca-1(9),2(7),3,5,10,12-hexaene, TBA G4 DNA (5'-D(*GP*GP*TP*TP*GP*GP*TP*GP*TP*GP*GP*TP*TP*GP*G)-3')
著者Liu, W, Zhu, B.C, Mao, Z.W.
登録日2021-08-11
公開日2022-09-28
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of a thrombin binding aptamer complex with a non-planar platinum(ii) compound.
Chem Sci, 13, 2022
5EU1
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BU of 5eu1 by Molmil
CRYSTAL STRUCTURE OF BRD9 IN COMPLEX WITH BI-7273
分子名称: 4-[4-[(dimethylamino)methyl]-3,5-dimethoxy-phenyl]-2-methyl-2,7-naphthyridin-1-one, BRD9
著者Bader, G, Martin, L.M, Steurer, S, Weiss-Puxbaum, A, Zoephel, A.
登録日2015-11-18
公開日2016-03-09
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure-Based Design of an in Vivo Active Selective BRD9 Inhibitor.
J.Med.Chem., 59, 2016
2BE6
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BU of 2be6 by Molmil
2.0 A crystal structure of the CaV1.2 IQ domain-Ca/CaM complex
分子名称: CALCIUM ION, Calmodulin 2, NICKEL (II) ION, ...
著者Van Petegem, F, Chatelain, F.C, Minor Jr, D.L.
登録日2005-10-23
公開日2005-11-15
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Insights into voltage-gated calcium channel regulation from the structure of the Ca(V)1.2 IQ domain-Ca(2+)/calmodulin complex
Nat.Struct.Mol.Biol., 12, 2005
4OCH
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BU of 4och by Molmil
Apo structure of Smr domain of MutS2 from Deinococcus radiodurans
分子名称: Endonuclease MutS2, GLYCEROL
著者Zhang, H, Zhao, Y, Xu, Q, Hua, Y.J.
登録日2014-01-09
公開日2014-06-25
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.4001 Å)
主引用文献Structural and functional studies of MutS2 from Deinococcus radiodurans.
Dna Repair, 21, 2014
5X61
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BU of 5x61 by Molmil
Crystal structure of Acetylcholinesterase Catalytic Subunit of the Malaria Vector Anopheles Gambiae, 3.4 A
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, AMMONIUM ION, ...
著者Han, Q, Robinson, H, Ding, H, Wong, D.M, Lam, P.C.H, Totrov, M.M, Carlier, P.R, Li, J.
登録日2017-02-20
公開日2017-03-15
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Crystal structure of acetylcholinesterase catalytic subunits of the malaria vector Anopheles gambiae
Insect Sci., 2017
6TYZ
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BU of 6tyz by Molmil
Structure of Ku80 von Willebrand domain complexed with APLF Ku Binding Motif
分子名称: 1,2-ETHANEDIOL, GLU-ARG-LYS-ARG-ILE-LEU-PRO-THR-TRP-MET-LEU-ALA, X-ray repair cross-complementing protein 5
著者Min, J, Pedersen, L.C.
登録日2019-08-09
公開日2019-11-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.51076627 Å)
主引用文献Ligand binding characteristics of the Ku80 von Willebrand domain.
DNA Repair (Amst.), 85, 2019
1AKG
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BU of 1akg by Molmil
ALPHA-CONOTOXIN PNIB FROM CONUS PENNACEUS
分子名称: ALPHA-CONOTOXIN PNIB
著者Hu, S.-H, Martin, J.L.
登録日1997-05-18
公開日1998-05-20
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Crystal structure at 1.1 A resolution of alpha-conotoxin PnIB: comparison with alpha-conotoxins PnIA and GI.
Biochemistry, 36, 1997
7UBJ
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BU of 7ubj by Molmil
Transcription antitermination factor Qlambda, type-I crystal
分子名称: 1,2-ETHANEDIOL, Antitermination protein Q, CHLORIDE ION, ...
著者Yin, Z, Ebright, R.H.
登録日2022-03-15
公開日2022-09-28
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献In transcription antitermination by Q lambda , NusA induces refolding of Q lambda to form a nozzle that extends the RNA polymerase RNA-exit channel.
Proc.Natl.Acad.Sci.USA, 119, 2022
7UBL
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BU of 7ubl by Molmil
Transcription antitermination factor Qlambda in complex with Q-lambda-binding-element DNA
分子名称: 1,2-ETHANEDIOL, Antitermination protein Q, DNA (5'-D(P*CP*AP*CP*CP*CP*AP*AP*TP*TP*TP*TP*AP*TP*TP*CP*AP*AP*TP*G)-3'), ...
著者Yin, Z, Ebright, R.H.
登録日2022-03-15
公開日2022-09-28
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.177 Å)
主引用文献In transcription antitermination by Q lambda , NusA induces refolding of Q lambda to form a nozzle that extends the RNA polymerase RNA-exit channel.
Proc.Natl.Acad.Sci.USA, 119, 2022
1ALV
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BU of 1alv by Molmil
CALCIUM BOUND DOMAIN VI OF PORCINE CALPAIN
分子名称: CALCIUM ION, CALPAIN
著者Narayana, S.V.L, Lin, G, Chattopadhyay, D, Maki, M.
登録日1997-06-03
公開日1998-06-03
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of calcium bound domain VI of calpain at 1.9 A resolution and its role in enzyme assembly, regulation, and inhibitor binding.
Nat.Struct.Biol., 4, 1997
6E2B
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BU of 6e2b by Molmil
Ubiquitin in complex with Pt(2-phenilpyridine)(PPh3)
分子名称: GLYCEROL, SULFATE ION, Ubiquitin, ...
著者Zhemkov, V.A, Kim, M.
登録日2018-07-11
公開日2018-11-14
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Reactions of Cyclometalated Platinum(II) [Pt(N∧C)(PR3)Cl] Complexes with Imidazole and Imidazole-Containing Biomolecules: Fine-Tuning of Reactivity and Photophysical Properties via Ligand Design.
Inorg Chem, 58, 2019
5CPN
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BU of 5cpn by Molmil
Crystal structure of XenA from Pseudomonas putida in complex with an NADH mimic (mAc)
分子名称: 1-DEOXY-1-(7,8-DIMETHYL-2,4-DIOXO-3,4-DIHYDRO-2H-BENZO[G]PTERIDIN-1-ID-10(5H)-YL)-5-O-PHOSPHONATO-D-RIBITOL, 1-[(3S)-1-benzylpiperidin-3-yl]ethanone, Xenobiotic reductase
著者Knaus, T, Paul, C.E, Levy, C.W, Mutti, F.G, Hollmann, F, Scrutton, N.S.
登録日2015-07-21
公開日2016-01-20
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Better than Nature: Nicotinamide Biomimetics That Outperform Natural Coenzymes.
J.Am.Chem.Soc., 138, 2016
6GI1
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BU of 6gi1 by Molmil
Crystal structure of the ferric enterobactin esterase (pfeE) mutant(S157A) from Pseudomonas aeruginosa in presence of enterobactin
分子名称: 1,2-ETHANEDIOL, 2-(2,3-DIHYDROXY-BENZOYLAMINO)-3-HYDROXY-PROPIONIC ACID, FE (III) ION, ...
著者Moynie, L, Naismith, J.H.
登録日2018-05-09
公開日2018-06-20
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献A Key Role for the Periplasmic PfeE Esterase in Iron Acquisition via the Siderophore Enterobactin in Pseudomonas aeruginosa.
ACS Chem. Biol., 13, 2018

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