PDB: 183105 件ウェブページステータス検索Chemie searchBIRD

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1W3I	Sulfolobus solfataricus 2-keto-3-deoxygluconate (KDG) aldolase complex with pyruvate 分子名称: 2-KETO-3-DEOXY GLUCONATE ALDOLASE, GLYCEROL, PYRUVIC ACID 著者 Theodossis, A, Walden, H, Westwick, E.J, Connaris, H, Lamble, H.J, Hough, D.W, Danson, M.J, Taylor, G.L. 登録日 2004-07-15 公開日 2004-09-02 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 The structural basis for substrate promiscuity in 2-keto-3-deoxygluconate aldolase from the Entner-Doudoroff pathway in Sulfolobus solfataricus. J. Biol. Chem., 279, 2004
1W2G	Crystal Structure Of Mycobacterium Tuberculosis Thymidylate Kinase Complexed With Deoxythymidine (dT) (2.1 A Resolution) 分子名称: ACETATE ION, THYMIDINE, THYMIDYLATE KINASE TMK 著者 Fioravanti, E, Adam, V, Munier-Lehmann, H, Bourgeois, D. 登録日 2004-07-06 公開日 2005-01-12 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 The Crystal Structure of Mycobacterium Tuberculosis Thymidylate Kinase in Complex with 3'-Azidodeoxythymidine Monophosphate Suggests a Mechanism for Competitive Inhibition Biochemistry, 44, 2005
3UM9	Crystal Structure of the Defluorinating L-2-Haloacid Dehalogenase Bpro0530 分子名称: Haloacid dehalogenase, type II, NICKEL (II) ION, ... 著者 Chan, P.W.Y, Savchenko, A, Yakunin, A.F, Edwards, E.A, Pai, E.F. 登録日 2011-11-12 公開日 2012-11-14 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.19 Å) 主引用文献 Structural adaptations of L-2-haloacid dehalogenases that enable hydrolytic defluorination To be Published
1W2H	Crystal Structure Of Mycobacterium Tuberculosis Thymidylate Kinase Complexed With Azidothymidine Monophosphate (AZT-MP) (2.0 A Resolution) 分子名称: 3'-AZIDO-3'-DEOXYTHYMIDINE-5'-MONOPHOSPHATE, ACETATE ION, THYMIDYLATE KINASE TMK 著者 Fioravanti, E, Adam, V, Munier-Lehmann, H, Bourgeois, D. 登録日 2004-07-06 公開日 2005-01-12 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 The crystal structure of Mycobacterium tuberculosis thymidylate kinase in complex with 3'-azidodeoxythymidine monophosphate suggests a mechanism for competitive inhibition. Biochemistry, 44, 2005
4OLU	Crystal structure of antibody VRC07 in complex with clade A/E 93TH057 HIV-1 gp120 core 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen binding fragment of heavy chain: Antibody VRC01, Antigen binding fragment of light chain: Antibody VRC01, ... 著者 Kwon, Y.D, Kwong, P.D. 登録日 2014-01-25 公開日 2014-09-03 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.202 Å) 主引用文献 Enhanced Potency of a Broadly Neutralizing HIV-1 Antibody In Vitro Improves Protection against Lentiviral Infection In Vivo. J.Virol., 88, 2014
1W23	Crystal structure of phosphoserine aminotransferase from Bacillus alcalophilus 分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ... 著者 Dubnovitsky, A, Kapetaniou, E.G, Papageorgiou, A.C. 登録日 2004-06-25 公開日 2004-12-22 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.08 Å) 主引用文献 Enzyme Adaptation to Alkaline Ph: Atomic Resolution (1.08 A) Structure of Phosphoserine Aminotransferase from Bacillus Alcalophilus Protein Sci., 14, 2005
4P0H	Crystal Structure Analysis of Macrophage Migration Inhibitory Factor in complex with Dimethylformamide 分子名称: DIMETHYLFORMAMIDE, GLYCEROL, Macrophage migration inhibitory factor 著者 Pantouris, G, Lolis, E. 登録日 2014-02-21 公開日 2014-04-02 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.93 Å) 主引用文献 An Analysis of MIF Structural Features that Control Functional Activation of CD74. Chem.Biol., 22, 2015
2Y54	Fragment growing induces conformational changes in acetylcholine- binding protein: A structural and thermodynamic analysis - (Fragment 1) 分子名称: CHLORIDE ION, SOLUBLE ACETYLCHOLINE RECEPTOR, SULFATE ION, ... 著者 Rucktooa, P, Edink, E, deEsch, I.J.P, Sixma, T.K. 登録日 2011-01-12 公開日 2011-06-15 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3.65 Å) 主引用文献 Fragment Growing Induces Conformational Changes in Acetylcholine-Binding Protein: A Structural and Thermodynamic Analysis. J.Am.Chem.Soc., 133, 2011
1W3H	The 3-dimensional structure of a thermostable mutant of a xylanase (Xyn10A) from Cellvibrio japonicus 分子名称: 1,2-ETHANEDIOL, CALCIUM ION, ENDO-1,4-BETA-XYLANASE A PRECURSOR 著者 Andrews, S, Taylor, E.J, Pell, G.N, Vincent, F, Ducros, V.M.A, Davies, G.J, Lakey, J.H, Glbert, H.J. 登録日 2004-07-15 公開日 2004-09-30 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 The Use of Forced Protein Evolution to Investigate and Improve Stability of Family 10 Xylanases: The Production of Ca2+-Independent Stable Xylanases J.Biol.Chem., 279, 2004
1W1U	Inactive Urocanase-SA cocrystallized with urocanate 分子名称: (2E)-3-(1H-IMIDAZOL-4-YL)ACRYLIC ACID, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, UROCANATE HYDRATASE 著者 Kessler, D, Retey, J, Schulz, G.E. 登録日 2004-06-24 公開日 2004-08-19 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.23 Å) 主引用文献 Structure and Action of Urocanase J.Mol.Biol., 342, 2004
6QS1	Crystal structure of human Angiotensin-1 converting enzyme N-domain in complex with BPPb 分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Cozier, G.E, Acharya, K.R. 登録日 2019-02-20 公開日 2019-05-22 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural basis for the C-domain-selective angiotensin-converting enzyme inhibition by bradykinin-potentiating peptide b (BPPb). Biochem.J., 476, 2019
1W3N	Sulfolobus solfataricus 2-keto-3-deoxygluconate (KDG) aldolase complex with D-KDG 分子名称: 2-KETO-3-DEOXY GLUCONATE ALDOLASE, 3-DEOXY-D-ARABINO-HEXONIC ACID, GLYCEROL 著者 Theodossis, A, Walden, H, Westwick, E.J, Connaris, H, Lamble, H.J, Hough, D.W, Danson, M.J, Taylor, G.L. 登録日 2004-07-17 公開日 2004-09-02 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 The structural basis for substrate promiscuity in 2-keto-3-deoxygluconate aldolase from the Entner-Doudoroff pathway in Sulfolobus solfataricus. J. Biol. Chem., 279, 2004
1W22	Crystal structure of inhibited human HDAC8 分子名称: HISTONE DEACETYLASE 8, N-HYDROXY-4-(METHYL{[5-(2-PYRIDINYL)-2-THIENYL]SULFONYL}AMINO)BENZAMIDE, POTASSIUM ION, ... 著者 Vannini, A, Volpari, C, Caroli Casavola, E, Di Marco, S. 登録日 2004-06-25 公開日 2004-09-24 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal Structure of a Eukaryotic Zn-Dependent Histone Deacetylase,Human Hdac8,Complexed with a Hydroxamic Acid Inhibitor Proc.Natl.Acad.Sci.USA, 101, 2004
1W2P	The 3-dimensional structure of a xylanase (Xyn10A) from Cellvibrio japonicus 分子名称: 1,2-ETHANEDIOL, CALCIUM ION, ENDO-1,4-BETA-XYLANASE A PRECURSOR 著者 Taylor, E.J, Vincent, F, Gilbert, H.J, Davies, G.J. 登録日 2004-07-07 公開日 2004-09-30 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 The Use of Forced Protein Evolution to Investigate and Improve Stability of Family 10 Xylanases: The Production of Ca2+-Independent Stable Xylanases J.Biol.Chem., 279, 2004
4OLZ	Crystal structure of antibody VRC07-G54W in complex with clade A/E 93TH057 HIV-1 gp120 core 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen binding fragment of heavy chain: Antibody VRC01, Antigen binding fragment of light chain: Antibody VRC01, ... 著者 Kwon, Y.D, Kwong, P.D. 登録日 2014-01-25 公開日 2014-09-03 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Enhanced Potency of a Broadly Neutralizing HIV-1 Antibody In Vitro Improves Protection against Lentiviral Infection In Vivo. J.Virol., 88, 2014
1W2V	The 3-dimensional structure of a thermostable mutant of a xylanase (Xyn10A) from Cellvibrio japonicus 分子名称: 1,2-ETHANEDIOL, CALCIUM ION, ENDO-1,4-BETA-XYLANASE A PRECURSOR 著者 Andrews, S, Taylor, E.J, Pell, G.N, Vincent, F, Ducros, V.M.A, Davies, G.J, Lakey, J.H, Glbert, H.J. 登録日 2004-07-09 公開日 2004-09-30 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 The Use of Forced Protein Evolution to Investigate and Improve Stability of Family 10 Xylanases: The Production of Ca2+-Independent Stable Xylanases J.Biol.Chem., 279, 2004
4OND	Ancestral Steroid Receptor 2 DBD helix mutant - ERE DNA complex 分子名称: 5'-D(*CP*CP*AP*GP*GP*TP*CP*AP*GP*AP*GP*TP*GP*AP*CP*CP*TP*G)-3', 5'-D(*TP*CP*AP*GP*GP*TP*CP*AP*CP*TP*CP*TP*GP*AP*CP*CP*TP*G)-3', Ancestral SR2 Helix Mutant, ... 著者 Ortlund, E.O, Murphy, M.N. 登録日 2014-01-28 公開日 2014-10-29 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.253 Å) 主引用文献 Evolution of DNA specificity in a transcription factor family produced a new gene regulatory module. Cell(Cambridge,Mass.), 159, 2014
2GHD	Conformational mobility in the active site of a heme peroxidase 分子名称: CYANIDE ION, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION, ... 著者 Badyal, S.K, Joyce, M.G, Sharp, K.H, Raven, E.L, Moody, P.C.E. 登録日 2006-03-27 公開日 2006-06-13 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Conformational Mobility in the Active Site of a Heme Peroxidase. J.Biol.Chem., 281, 2006
2GBX	Crystal Structure of Biphenyl 2,3-Dioxygenase from Sphingomonas yanoikuyae B1 Bound to Biphenyl 分子名称: BIPHENYL, Biphenyl 2,3-Dioxygenase Alpha Subunit, Biphenyl 2,3-Dioxygenase Beta Subunit, ... 著者 Ferraro, D.J, Brown, E.N, Yu, C, Parales, R.E, Gibson, D.T, Ramaswamy, S. 登録日 2006-03-12 公開日 2007-03-20 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structural investigations of the ferredoxin and terminal oxygenase components of the biphenyl 2,3-dioxygenase from Sphingobium yanoikuyae B1. Bmc Struct.Biol., 7, 2007
2XJZ	Crystal structure of the LMO2:LDB1-LID complex, C2 crystal form 分子名称: CHLORIDE ION, LIM DOMAIN-BINDING PROTEIN 1, RHOMBOTIN-2, ... 著者 El Omari, K, Karia, D, Porcher, C, Mancini, E.J. 登録日 2010-07-06 公開日 2010-07-21 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structure of the Leukemia Oncogene Lmo2: Implications for the Assembly of a Hematopoietic Transcription Factor Complex. Blood, 117, 2011
1MXX	crystal titration experiments (AMPA co-crystals soaked in 100 uM BrW) 分子名称: GLUTAMATE RECEPTOR 2, ZINC ION 著者 Jin, R, Gouaux, E. 登録日 2002-10-03 公開日 2003-06-10 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Probing the Function, Conformational Plasticity, and Dimer-Dimer Contacts of the GluR2 Ligand-Binding Core: Studies of 5-Substituted Willardiines and GluR2 S1S2 in the Crystal Biochemistry, 42, 2003
1MY8	AmpC beta-lactamase in complex with an M.carboxyphenylglycylboronic acid bearing the cephalothin R1 side chain 分子名称: (1R)-1-(2-THIENYLACETYLAMINO)-1-PHENYLMETHYLBORONIC ACID, PHOSPHATE ION, beta-lactamase 著者 Morandi, F, Caselli, E, Morandi, S, Focia, P.J, Blazquez, J, Shoichet, B.K, Prati, F. 登録日 2002-10-03 公開日 2003-03-04 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.72 Å) 主引用文献 Nanomolar inhibitors of AmpC beta-lactamase. J.Am.Chem.Soc., 125, 2003
1MX8	Two homologous rat cellular retinol-binding proteins differ in local structure and flexibility 分子名称: CELLULAR RETINOL-BINDING PROTEIN I, HOLO, RETINOL 著者 Lu, J, Cistola, D.P, Li, E. 登録日 2002-10-01 公開日 2003-07-29 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Two homologous rat cellular retinol-binding proteins differ in local conformational flexibility. J.Mol.Biol., 330, 2003
2Y7Z	Structure and property based design of factor Xa inhibitors: pyrrolidin-2-ones with aminoindane and phenylpyrrolidine P4 motifs 分子名称: 6-CHLORO-N-[(3S)-1-[(1S)-1-DIMETHYLAMINO-2,3-DIHYDRO-1H-INDEN-5-YL]-2-OXO-PYRROLIDIN-3-YL]NAPHTHALENE-2-SULFONAMIDE, ACTIVATED FACTOR XA HEAVY CHAIN, CALCIUM ION, ... 著者 Young, R.J, Adams, C, Blows, M, Brown, D, Burns-Kurtis, C.L, Chaudry, L, Chan, C, Convery, M.A, Davies, D.E, Exall, A.M, Foster, G, Harling, J.D, Hortense, E, Irving, W.R, Irvine, S, Jackson, S, Kleanthous, S, Pateman, A.J, Patikis, A.N, Roethka, T.J, Senger, S, Stelman, G.J, Toomey, J.R, West, R.I, Whittaker, C, Zhou, P, Watson, N.S. 登録日 2011-02-02 公開日 2011-03-16 最終更新日 2019-10-16 実験手法 X-RAY DIFFRACTION (1.84 Å) 主引用文献 Structure and Property Based Design of Factor Xa Inhibitors: Pyrrolidin-2-Ones with Aminoindane and Phenylpyrrolidine P4 Motifs. Bioorg.Med.Chem.Lett., 21, 2011
1N17	Structure and Dynamics of Thioguanine-modified Duplex DNA 分子名称: 5'-D(*GP*CP*TP*AP*AP*GP*(S6G)P*AP*AP*AP*GP*CP*C)-3', 5'-D(*GP*GP*CP*TP*TP*TP*CP*CP*TP*TP*AP*GP*C)-3' 著者 Somerville, L, Krynetski, E.Y, Krynetskaia, N.F, Beger, R.D, Zhang, W, Marhefka, C.A, Evans, W.E, Kriwacki, R.W. 登録日 2002-10-16 公開日 2002-10-23 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Structure and dynamics of thioguanine-modified duplex DNA J.Biol.Chem., 278, 2003

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