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7UCK
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BU of 7uck by Molmil
80S translation initiation complex with ac4c(-1) mRNA and Harringtonine
分子名称: 18S rRNA, 28s rRNA, 40S ribosomal protein S10, ...
著者Yang, R, Arango, D, Sturgill, D, Oberdoerffer, S.
登録日2022-03-16
公開日2022-06-01
最終更新日2022-08-17
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Direct epitranscriptomic regulation of mammalian translation initiation through N4-acetylcytidine.
Mol.Cell, 82, 2022
7UCJ
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BU of 7ucj by Molmil
Mammalian 80S translation initiation complex with mRNA and Harringtonine
分子名称: 18S rRNA, 28s rRNA, 40S ribosomal protein S10, ...
著者Yang, R, Arango, D, Sturgill, D, Oberdoerffer, S.
登録日2022-03-16
公開日2022-06-01
最終更新日2022-08-17
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Direct epitranscriptomic regulation of mammalian translation initiation through N4-acetylcytidine.
Mol.Cell, 82, 2022
7U2H
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BU of 7u2h by Molmil
Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, and deacylated E-site tRNAgly at 2.55A resolution
分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
著者Syroegin, E.A, Aleksandrova, E.V, Polikanov, Y.S.
登録日2022-02-24
公開日2022-07-13
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structural basis for the inability of chloramphenicol to inhibit peptide bond formation in the presence of A-site glycine.
Nucleic Acids Res., 50, 2022
7U2J
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BU of 7u2j by Molmil
Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, peptidyl P-site fMAC-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolution
分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
著者Syroegin, E.A, Aleksandrova, E.V, Polikanov, Y.S.
登録日2022-02-24
公開日2022-07-13
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structural basis for the inability of chloramphenicol to inhibit peptide bond formation in the presence of A-site glycine.
Nucleic Acids Res., 50, 2022
7U2I
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BU of 7u2i by Molmil
Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolution
分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
著者Syroegin, E.A, Aleksandrova, E.V, Polikanov, Y.S.
登録日2022-02-24
公開日2022-07-13
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structural basis for the inability of chloramphenicol to inhibit peptide bond formation in the presence of A-site glycine.
Nucleic Acids Res., 50, 2022
7UPH
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BU of 7uph by Molmil
Structure of a ribosome with tethered subunits
分子名称: 30S ribosomal protein S10, 30S ribosomal protein S11, 30S ribosomal protein S12, ...
著者Kim, D.S, Watkins, A, Bidstrup, E, Lee, J, Topkar, V.V, Kofman, C, Schwarz, K.J, Liu, Y, Pintilie, G, Roney, E, Das, R, Jewett, M.C.
登録日2022-04-15
公開日2022-08-17
最終更新日2022-08-31
実験手法ELECTRON MICROSCOPY (4.18 Å)
主引用文献Three-dimensional structure-guided evolution of a ribosome with tethered subunits.
Nat.Chem.Biol., 18, 2022
7V2N
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BU of 7v2n by Molmil
T.thermophilus 30S ribosome with KsgA, class K2
分子名称: 16s ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Raina, R, Singh, J, Anand, R, Vinothkumar, K.R.
登録日2021-08-09
公開日2022-04-06
最終更新日2022-04-27
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Decoding the Mechanism of Specific RNA Targeting by Ribosomal Methyltransferases.
Acs Chem.Biol., 17, 2022
7V2Q
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BU of 7v2q by Molmil
T.thermophilus 30S ribosome with KsgA, class K6
分子名称: 16s ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Raina, R, Singh, J, Anand, R, Vinothkumar, K.R.
登録日2021-08-09
公開日2022-04-06
最終更新日2022-04-27
実験手法ELECTRON MICROSCOPY (3.24 Å)
主引用文献Decoding the Mechanism of Specific RNA Targeting by Ribosomal Methyltransferases.
Acs Chem.Biol., 17, 2022
7V2P
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BU of 7v2p by Molmil
T.thermophilus 30S ribosome with KsgA, class K5
分子名称: 16s ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Raina, R, Singh, J, Anand, R, Vinothkumar, K.R.
登録日2021-08-09
公開日2022-04-06
最終更新日2022-04-27
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Decoding the Mechanism of Specific RNA Targeting by Ribosomal Methyltransferases.
Acs Chem.Biol., 17, 2022
7V2M
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BU of 7v2m by Molmil
T.thermophilus 30S ribosome with KsgA, class K1k4
分子名称: 16s ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Raina, R, Singh, J, Anand, R, Vinothkumar, K.R.
登録日2021-08-09
公開日2022-04-06
最終更新日2022-04-27
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Decoding the Mechanism of Specific RNA Targeting by Ribosomal Methyltransferases.
Acs Chem.Biol., 17, 2022
7V2O
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BU of 7v2o by Molmil
T.thermophilus 30S ribosome with KsgA, class K4
分子名称: 16s ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Raina, R, Singh, J, Anand, R, Vinothkumar, K.R.
登録日2021-08-09
公開日2022-04-06
最終更新日2022-04-27
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Decoding the Mechanism of Specific RNA Targeting by Ribosomal Methyltransferases.
Acs Chem.Biol., 17, 2022
7V2L
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BU of 7v2l by Molmil
T.thermophilus 30S ribosome with KsgA, class K1k2
分子名称: 16s ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
著者Raina, R, Singh, J, Anand, R, Vinothkumar, K.R.
登録日2021-08-09
公開日2022-04-06
最終更新日2022-04-27
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Decoding the Mechanism of Specific RNA Targeting by Ribosomal Methyltransferases.
Acs Chem.Biol., 17, 2022
7UG7
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BU of 7ug7 by Molmil
70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin B
分子名称: 1,4-DIAMINOBUTANE, 16S rRNA, 23S rRNA, ...
著者Rundlet, E.J, Wieland, M, Holm, M, Koller, T.O, Blanchard, S.C, Wilson, D.N.
登録日2022-03-24
公開日2022-05-18
実験手法ELECTRON MICROSCOPY (2.58 Å)
主引用文献The cyclic octapeptide antibiotic argyrin B inhibits translation by trapping EF-G on the ribosome during translocation.
Proc.Natl.Acad.Sci.USA, 119, 2022
7UNV
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BU of 7unv by Molmil
Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A)
分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
著者Basu, R.S, Sherman, M.B, Gagnon, M.G.
登録日2022-04-11
公開日2022-06-22
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Compact IF2 allows initiator tRNA accommodation into the P site and gates the ribosome to elongation
Nat Commun, 13, 2022
7UNU
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BU of 7unu by Molmil
Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B)
分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
著者Basu, R.S, Sherman, M.B, Gagnon, M.G.
登録日2022-04-11
公開日2022-06-22
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Compact IF2 allows initiator tRNA accommodation into the P site and gates the ribosome to elongation
Nat Commun, 13, 2022
7UNR
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BU of 7unr by Molmil
Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A)
分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
著者Basu, R.S, Sherman, M.B, Gagnon, M.G.
登録日2022-04-11
公開日2022-06-22
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Compact IF2 allows initiator tRNA accommodation into the P site and gates the ribosome to elongation
Nat Commun, 13, 2022
7UNW
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BU of 7unw by Molmil
Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B)
分子名称: 16S Ribosomal RNA, 23S Ribosomal RNA, 30S ribosomal protein S10, ...
著者Basu, R.S, Sherman, M.B, Gagnon, M.G.
登録日2022-04-11
公開日2022-06-22
最終更新日2024-02-14
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Compact IF2 allows initiator tRNA accommodation into the P site and gates the ribosome to elongation
Nat Commun, 13, 2022
7UVX
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BU of 7uvx by Molmil
A. baumannii 70S ribosome-Streptothricin-F complex
分子名称: 16s Ribosomal RNA, 23s ribosomal RNA, 30S ribosomal protein S10, ...
著者Morgan, C.E, Yu, E.W.
登録日2022-05-02
公開日2023-04-19
最終更新日2023-05-31
実験手法ELECTRON MICROSCOPY (2.35 Å)
主引用文献Streptothricin F is a bactericidal antibiotic effective against highly drug-resistant gram-negative bacteria that interacts with the 30S subunit of the 70S ribosome.
Plos Biol., 21, 2023
7UW1
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BU of 7uw1 by Molmil
A. baumannii 70S ribosome-Streptothricin-D complex
分子名称: 16s Ribosomal RNA, 23s ribosomal RNA, 30S ribosomal protein S10, ...
著者Morgan, C.E, Yu, E.W.
登録日2022-05-02
公開日2023-04-19
最終更新日2023-05-31
実験手法ELECTRON MICROSCOPY (2.21 Å)
主引用文献Streptothricin F is a bactericidal antibiotic effective against highly drug-resistant gram-negative bacteria that interacts with the 30S subunit of the 70S ribosome.
Plos Biol., 21, 2023
7UVZ
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BU of 7uvz by Molmil
A. baumannii ribosome-Streptothricin-D complex: 70S with E-site tRNA
分子名称: 16s Ribosomal RNA, 23s ribosomal RNA, 30S ribosomal protein S10, ...
著者Morgan, C.E, Yu, E.W.
登録日2022-05-02
公開日2023-04-19
最終更新日2023-05-31
実験手法ELECTRON MICROSCOPY (2.21 Å)
主引用文献Streptothricin F is a bactericidal antibiotic effective against highly drug-resistant gram-negative bacteria that interacts with the 30S subunit of the 70S ribosome.
Plos Biol., 21, 2023
7UVV
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BU of 7uvv by Molmil
A. baumannii ribosome-Streptothricin-F complex: 70S with P-site tRNA
分子名称: 16s Ribosomal RNA, 23s ribosomal RNA, 30S ribosomal protein S10, ...
著者Morgan, C.E, Yu, E.W.
登録日2022-05-02
公開日2023-04-19
最終更新日2023-05-31
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Streptothricin F is a bactericidal antibiotic effective against highly drug-resistant gram-negative bacteria that interacts with the 30S subunit of the 70S ribosome.
Plos Biol., 21, 2023
7UVY
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BU of 7uvy by Molmil
A. baumannii ribosome-Streptothricin-D complex: 70S with P-site tRNA
分子名称: 16s Ribosomal RNA, 23s ribosomal RNA, 30S ribosomal protein S10, ...
著者Morgan, C.E, Yu, E.W.
登録日2022-05-02
公開日2023-04-19
最終更新日2023-05-31
実験手法ELECTRON MICROSCOPY (2.39 Å)
主引用文献Streptothricin F is a bactericidal antibiotic effective against highly drug-resistant gram-negative bacteria that interacts with the 30S subunit of the 70S ribosome.
Plos Biol., 21, 2023
7UVW
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BU of 7uvw by Molmil
A. baumannii ribosome: 70S with E-site tRNA
分子名称: 16s Ribosomal RNA, 23s ribosomal RNA, 30S ribosomal protein S10, ...
著者Morgan, C.E, Yu, E.W.
登録日2022-05-02
公開日2023-04-19
最終更新日2023-05-31
実験手法ELECTRON MICROSCOPY (2.37 Å)
主引用文献Streptothricin F is a bactericidal antibiotic effective against highly drug-resistant gram-negative bacteria that interacts with the 30S subunit of the 70S ribosome.
Plos Biol., 21, 2023
7WTL
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BU of 7wtl by Molmil
Cryo-EM structure of a yeast pre-40S ribosomal subunit - State Dis-D
分子名称: 18S rRNA, 40S ribosomal protein S1-A, 40S ribosomal protein S11-A, ...
著者Cheng, J, La Venuta, G, Lau, B, Berninghausen, O, Beckmann, R, Hurt, E.
登録日2022-02-05
公開日2022-10-19
最終更新日2022-12-21
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献In vitro structural maturation of an early stage pre-40S particle coupled with U3 snoRNA release and central pseudoknot formation.
Nucleic Acids Res., 50, 2022
7WTW
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BU of 7wtw by Molmil
Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-A3
分子名称: 18S rRNA, 40S ribosomal protein S11, 40S ribosomal protein S12, ...
著者Cheng, J, Lau, B, Thoms, M, Ameismeier, M, Berninghausen, O, Hurt, E, Beckmann, R.
登録日2022-02-05
公開日2022-10-19
最終更新日2022-12-21
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献The nucleoplasmic phase of pre-40S formation prior to nuclear export.
Nucleic Acids Res., 50, 2022

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件を2024-05-29に公開中

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