Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

5IFW
DownloadVisualize
BU of 5ifw by Molmil
Quantitative interaction mapping reveals an extended ubiquitin regulatory domain in ASPL that disrupts functional p97 hexamers and induces cell death
分子名称: ADENOSINE-5'-DIPHOSPHATE, Tether containing UBX domain for GLUT4, Transitional endoplasmic reticulum ATPase
著者Roske, Y, Heinemann, U.
登録日2016-02-26
公開日2016-10-26
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Quantitative interaction mapping reveals an extended UBX domain in ASPL that disrupts functional p97 hexamers.
Nat Commun, 7, 2016
5IFS
DownloadVisualize
BU of 5ifs by Molmil
Quantitative interaction mapping reveals an extended ubiquitin regulatory domain in ASPL that disrupts functional p97 hexamers and induces cell death
分子名称: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, GLYCEROL, ...
著者Roske, Y, Arumughan, A, Heinemann, U, Wanker, E.
登録日2016-02-26
公開日2016-10-26
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.46 Å)
主引用文献Quantitative interaction mapping reveals an extended UBX domain in ASPL that disrupts functional p97 hexamers.
Nat Commun, 7, 2016
8HRZ
DownloadVisualize
BU of 8hrz by Molmil
Crystal structure of the p97-N/D1 hexamer in complex with six p47-UBX domains
分子名称: ADENOSINE-5'-DIPHOSPHATE, NSFL1 cofactor p47, Transitional endoplasmic reticulum ATPase
著者Nguyen, T.Q, Kang, W.
登録日2022-12-16
公開日2023-12-20
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal structure of the p97-N/D1 hexmaer in complex with six p47-UBX domains
J. Korean Chem. Soc., 68, 2024
3CF1
DownloadVisualize
BU of 3cf1 by Molmil
Structure of P97/vcp in complex with ADP/ADP.alfx
分子名称: ADENOSINE-5'-DIPHOSPHATE, ALUMINUM FLUORIDE, Transitional endoplasmic reticulum ATPase
著者Davies, J.M, Delabarre, B, Brunger, A.T, Weis, W.I.
登録日2008-03-01
公開日2008-04-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (4.4 Å)
主引用文献Improved structures of full-length p97, an AAA ATPase: implications for mechanisms of nucleotide-dependent conformational change.
Structure, 16, 2008
1S3S
DownloadVisualize
BU of 1s3s by Molmil
Crystal structure of AAA ATPase p97/VCP ND1 in complex with p47 C
分子名称: ADENOSINE-5'-DIPHOSPHATE, Transitional endoplasmic reticulum ATPase (TER ATPase) (15S Mg(2+)- ATPase p97 subunit) (Valosin containing protein) (VCP) [Contains: Valosin], p47 protein
著者Dreveny, I, Kondo, H, Uchiyama, K, Shaw, A, Zhang, X, Freemont, P.S.
登録日2004-01-14
公開日2004-03-30
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural basis of the interaction between the AAA ATPase p97/VCP and its adaptor protein p47.
Embo J., 23, 2004
3CF3
DownloadVisualize
BU of 3cf3 by Molmil
Structure of P97/vcp in complex with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Transitional endoplasmic reticulum ATPase
著者Davies, J.M, Delabarre, B, Brunger, A.T, Weis, W.I.
登録日2008-03-01
公開日2008-04-22
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (4.25 Å)
主引用文献Improved structures of full-length p97, an AAA ATPase: implications for mechanisms of nucleotide-dependent conformational change.
Structure, 16, 2008
1E32
DownloadVisualize
BU of 1e32 by Molmil
Structure of the N-Terminal domain and the D1 AAA domain of membrane fusion ATPase p97
分子名称: ADENOSINE-5'-DIPHOSPHATE, P97
著者Zhang, X, Shaw, A, Bates, P.A, Gorman, M.A, Kondo, H, Dokurno, P, Leonard M, G, Sternberg, J.E, Freemont, P.S.
登録日2000-06-05
公開日2001-05-31
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structure of the Aaa ATPase P97
Mol.Cell, 6, 2000
7Y53
DownloadVisualize
BU of 7y53 by Molmil
The cryo-EM structure of human ERAD retro-translocation complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, Derlin-1, Transitional endoplasmic reticulum ATPase
著者Cao, Y, Rao, B, Wang, Q, Yao, D, Xia, Y, Li, W, Li, S, Shen, Y.
登録日2022-06-16
公開日2023-10-18
最終更新日2024-04-03
実験手法ELECTRON MICROSCOPY (3.61 Å)
主引用文献The cryo-EM structure of the human ERAD retrotranslocation complex.
Sci Adv, 9, 2023
7Y59
DownloadVisualize
BU of 7y59 by Molmil
The cryo-EM structure of human ERAD retro-translocation complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Derlin-1, ...
著者Cao, Y, Rao, B, Wang, Q, Yao, D, Xia, Y, Li, W, Li, S, Shen, Y.
登録日2022-06-16
公開日2023-10-18
最終更新日2024-04-03
実験手法ELECTRON MICROSCOPY (4.51 Å)
主引用文献The cryo-EM structure of the human ERAD retrotranslocation complex.
Sci Adv, 9, 2023
7Y4W
DownloadVisualize
BU of 7y4w by Molmil
The cryo-EM structure of human ERAD retro-translocation complex
分子名称: ADENOSINE-5'-DIPHOSPHATE, Derlin-1, Transitional endoplasmic reticulum ATPase
著者Cao, Y, Rao, B, Wang, Q, Yao, D, Xia, Y, Li, W, Li, S, Shen, Y.
登録日2022-06-16
公開日2023-10-18
最終更新日2024-04-03
実験手法ELECTRON MICROSCOPY (3.67 Å)
主引用文献The cryo-EM structure of the human ERAD retrotranslocation complex.
Sci Adv, 9, 2023
8RS9
DownloadVisualize
BU of 8rs9 by Molmil
p97 (VCP) double mutant - F266A F539A
分子名称: Transitional endoplasmic reticulum ATPase
著者Arie, M, Matzov, D, Karmona, R, Szenkier, N, Stanhill, A, Navon, A.
登録日2024-01-24
公開日2024-05-29
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献p97 (VCP) double mutant - F266A F539A
To Be Published
8RSB
DownloadVisualize
BU of 8rsb by Molmil
p97 (VCP) mutant - F539A ADP state
分子名称: ADENOSINE-5'-DIPHOSPHATE, Transitional endoplasmic reticulum ATPase
著者Arie, M, Matzov, D, Karmona, R, Szenkier, N, Stanhill, A, Navon, A.
登録日2024-01-24
公開日2024-05-29
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献p97 (VCP) mutant - F539A ADP state
To Be Published
8RSC
DownloadVisualize
BU of 8rsc by Molmil
p97 (VCP) mutant - F539A
分子名称: ADENOSINE-5'-DIPHOSPHATE, Transitional endoplasmic reticulum ATPase
著者Arie, M, Matzov, D, Karmona, R, Szenkier, N, Stanhill, A, Navon, A.
登録日2024-01-24
公開日2024-05-29
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献p97 (VCP) mutant - F539A
To Be Published
6IP2
DownloadVisualize
BU of 6ip2 by Molmil
NSF-D1D2 part in the whole 20S complex
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Vesicle-fusing ATPase
著者Huang, X, Sun, S, Wang, X, Fan, F, Zhou, Q, Sui, S.F.
登録日2018-11-01
公開日2019-04-24
最終更新日2024-03-27
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Mechanistic insights into the SNARE complex disassembly.
Sci Adv, 5, 2019
6HD0
DownloadVisualize
BU of 6hd0 by Molmil
Common mode of remodeling AAA ATPases p97/CDC48 by their disassembly cofactors ASPL/PUX1
分子名称: ADENOSINE-5'-DIPHOSPHATE, Plant UBX domain-containing protein 1, Transitional endoplasmic reticulum ATPase
著者Heinemann, U, Roske, Y, Banchenko, S.
登録日2018-08-17
公開日2019-08-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (3.728 Å)
主引用文献Common Mode of Remodeling AAA ATPases p97/CDC48 by Their Disassembling Cofactors ASPL/PUX1.
Structure, 27, 2019
8VKU
DownloadVisualize
BU of 8vku by Molmil
Structure of VCP in complex with an ATPase activator (D2 domains only, hexameric form)
分子名称: (3R)-N-[2-(ethylsulfanyl)phenyl]-3-(1-oxo-1,3-dihydro-2H-isoindol-2-yl)butanamide, Transitional endoplasmic reticulum ATPase
著者Jones, N.H, Urnivicius, L, Kapoor, T.M.
登録日2024-01-09
公開日2024-06-19
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Allosteric activation of VCP, an AAA unfoldase, by small molecule mimicry.
Proc.Natl.Acad.Sci.USA, 121, 2024
8VLS
DownloadVisualize
BU of 8vls by Molmil
Structure of VCP in complex with an ATPase activator (D2 domains only, dodecameric form)
分子名称: (3R)-N-[2-(ethylsulfanyl)phenyl]-3-(1-oxo-1,3-dihydro-2H-isoindol-2-yl)butanamide, Transitional endoplasmic reticulum ATPase
著者Jones, N.H, Urnivicius, L, Kapoor, T.M.
登録日2024-01-12
公開日2024-06-19
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Allosteric activation of VCP, an AAA unfoldase, by small molecule mimicry.
Proc.Natl.Acad.Sci.USA, 121, 2024
8VOV
DownloadVisualize
BU of 8vov by Molmil
Structure of VCP in complex with an ATPase activator and ADP (D2 domains only, hexameric form)
分子名称: (3R)-N-[2-(ethylsulfanyl)phenyl]-3-(1-oxo-1,3-dihydro-2H-isoindol-2-yl)butanamide, ADENOSINE-5'-DIPHOSPHATE, Transitional endoplasmic reticulum ATPase
著者Jones, N.H, Urnivicius, L, Kapoor, T.M.
登録日2024-01-16
公開日2024-06-19
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Allosteric activation of VCP, an AAA unfoldase, by small molecule mimicry.
Proc.Natl.Acad.Sci.USA, 121, 2024
6HD3
DownloadVisualize
BU of 6hd3 by Molmil
Common mode of remodeling AAA ATPases p97/CDC48 by their disassembly cofactors ASPL/PUX1
分子名称: ADENOSINE-5'-DIPHOSPHATE, Cell division control protein 48 homolog A, PHOSPHATE ION
著者Heinemann, U, Roske, Y, Banchenko, S, Arumughan, A, Petrovic, S.
登録日2018-08-17
公開日2019-08-28
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Common Mode of Remodeling AAA ATPases p97/CDC48 by Their Disassembling Cofactors ASPL/PUX1.
Structure, 27, 2019
7MDO
DownloadVisualize
BU of 7mdo by Molmil
Structure of human p97 ATPase L464P mutant
分子名称: ADENOSINE-5'-DIPHOSPHATE, Transitional endoplasmic reticulum ATPase
著者Zhang, X, Gui, L, Li, S, Nandi, P, Columbres, R.C, Wong, D.E, Moen, D.R, Lin, H.J, Chiu, P.-L, Chou, T.-F.
登録日2021-04-05
公開日2021-08-25
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (4.12 Å)
主引用文献Conserved L464 in p97 D1-D2 linker is critical for p97 cofactor regulated ATPase activity.
Biochem.J., 478, 2021
7MDM
DownloadVisualize
BU of 7mdm by Molmil
Structure of human p97 ATPase L464P mutant
分子名称: ADENOSINE-5'-DIPHOSPHATE, Transitional endoplasmic reticulum ATPase
著者Zhang, X, Gui, L, Li, S, Nandi, P, Columbres, R.C, Wong, D.E, Moen, D.R, Lin, H.J, Chiu, P.-L, Chou, T.-F.
登録日2021-04-05
公開日2021-08-25
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (4.86 Å)
主引用文献Conserved L464 in p97 D1-D2 linker is critical for p97 cofactor regulated ATPase activity.
Biochem.J., 478, 2021
8OOI
DownloadVisualize
BU of 8ooi by Molmil
Full composite cryo-EM map of p97/VCP in ADP.Pi state
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
著者Cheng, T.C, Sakata, E, Schuetz, A.K.
登録日2023-04-05
公開日2024-01-31
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (2.61 Å)
主引用文献Characterizing ATP processing by the AAA+ protein p97 at the atomic level.
Nat.Chem., 16, 2024
7MHS
DownloadVisualize
BU of 7mhs by Molmil
Structure of p97 (subunits A to E) with substrate engaged
分子名称: ADENOSINE-5'-DIPHOSPHATE, BERYLLIUM TRIFLUORIDE ION, MAGNESIUM ION, ...
著者Xu, Y, Han, H, Cooney, I, Hill, C.P, Shen, P.S.
登録日2021-04-15
公開日2022-05-11
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Active conformation of the p97-p47 unfoldase complex.
Nat Commun, 13, 2022
8KG2
DownloadVisualize
BU of 8kg2 by Molmil
Crystal structure of p97-N/D1 hexamer in complex with FAF1-UBX domain
分子名称: ADENOSINE-5'-DIPHOSPHATE, FAS-associated factor 1, Transitional endoplasmic reticulum ATPase
著者Kang, W.
登録日2023-08-17
公開日2024-05-29
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Crystal Structure of p97-N/D1 Hexamer Complexed with FAF1 UBX Domain
J. Korean Chem. Soc., 2024
6MDO
DownloadVisualize
BU of 6mdo by Molmil
The D1 and D2 domain rings of NSF engaging the SNAP-25 N-terminus within the 20S supercomplex (focused refinement on D1/D2 rings, class 1)
分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Synaptosomal-associated protein 25, ...
著者White, K.I, Zhao, M, Brunger, A.T.
登録日2018-09-04
公開日2018-09-19
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.9 Å)
主引用文献Structural principles of SNARE complex recognition by the AAA+ protein NSF.
Elife, 7, 2018

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon