PDB: 222415 件ウェブページステータス検索Chemie searchBIRD

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6DPC	Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 12 mM Mn2+ and 200 mM K+ for 40 s at 21 C 分子名称: 1,2-ETHANEDIOL, DNA (5'-D(*CP*GP*AP*TP*GP*T)-3'), GLYCEROL, ... 著者 Samara, N.L, Yang, W. 登録日 2018-06-09 公開日 2018-08-15 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.34 Å) 主引用文献 Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol., 25, 2018
4OWL	Crystal Structure of the Vibrio vulnificus Hemolysin/Cytolysin Beta-Trefoil Lectin with N-Acetyl-D-Lactosamine Bound 分子名称: Cytolysin, GLYCEROL, beta-D-galactopyranose, ... 著者 Kaus, K, Olson, R. 登録日 2014-02-02 公開日 2014-05-28 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Glycan Specificity of the Vibrio vulnificus Hemolysin Lectin Outlines Evolutionary History of Membrane Targeting by a Toxin Family. J.Mol.Biol., 426, 2014
6DDM	Crystal Structure Analysis of the Epitope of an Anti-MICA Antibody 分子名称: Anti-MICA Fab fragment heavy chain clone 1D5, Anti-MICA Fab fragment light chain clone 1D5, MHC class I polypeptide-related sequence A 著者 Matsumoto, M.L. 登録日 2018-05-10 公開日 2018-10-24 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 High-resolution glycosylation site-engineering method identifies MICA epitope critical for shedding inhibition activity of anti-MICA antibodies. MAbs, 11, 2019
6DDV	Crystal Structure Analysis of the Epitope of an Anti-MICA Antibody 分子名称: Anti-MICA Fab fragment heavy chain clone 6E1, Anti-MICA Fab fragment light chain clone 6E1, MHC class I chain-related protein A 著者 Matsumoto, M.L. 登録日 2018-05-10 公開日 2018-10-24 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 High-resolution glycosylation site-engineering method identifies MICA epitope critical for shedding inhibition activity of anti-MICA antibodies. MAbs, 11, 2019
2G1U	CRYSTAL STRUCTURE OF A PUTATIVE TRANSPORT PROTEIN (TM1088A) FROM THERMOTOGA MARITIMA AT 1.50 A RESOLUTION 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, ADENOSINE MONOPHOSPHATE, SODIUM ION, ... 著者 Joint Center for Structural Genomics (JCSG) 登録日 2006-02-14 公開日 2006-03-28 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Crystal structure of (tm1088a) from THERMOTOGA MARITIMA at 1.50 A resolution To be published
4W8H	Crystal structure of the TIR domain of the Toll-related Receptor TRR-2 from the lower metazoan Hydra magnipapillata (crystal form II) 分子名称: CHLORIDE ION, Toll-receptor-related 2, hexa-His tag 著者 Weisse, R.H.-J, Scheidig, A.J. 登録日 2014-08-24 公開日 2015-09-09 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.14 Å) 主引用文献 Crystal structure of the TIR domain of the Toll-related Receptor TRR-2 from the lower metazoan Hydra magnipapillata (crystal form II) To Be Published
6DQT	Crystal structure of Haemophilus influenzae OppA complex with LGG 分子名称: ACETATE ION, LEU-GLY-GLY, Periplasmic oligopeptide-binding protein, ... 著者 Tanaka, K.J, Pinkett, H.W. 登録日 2018-06-11 公開日 2018-11-28 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Oligopeptide-binding protein from nontypeableHaemophilus influenzaehas ligand-specific sites to accommodate peptides and heme in the binding pocket. J. Biol. Chem., 294, 2019
4WAL	Crystal structure of selenomethionine Msl5 protein in complex with RNA at 2.2 A 分子名称: Branchpoint-bridging protein, CHLORIDE ION, GLYCEROL, ... 著者 Jacewicz, A, Smith, P, Chico, L, Schwer, B, Shuman, S. 登録日 2014-08-29 公開日 2014-12-17 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structural basis for recognition of intron branchpoint RNA by yeast Msl5 and selective effects of interfacial mutations on splicing of yeast pre-mRNAs. Rna, 21, 2015
2G38	A PE/PPE Protein Complex from Mycobacterium tuberculosis 分子名称: MANGANESE (II) ION, PE FAMILY PROTEIN, PPE FAMILY PROTEIN 著者 Strong, M, Sawaya, M.R, Eisenberg, D, TB Structural Genomics Consortium (TBSGC) 登録日 2006-02-17 公開日 2006-03-14 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Toward the structural genomics of complexes: Crystal structure of a PE/PPE protein complex from Mycobacterium tuberculosis. Proc.Natl.Acad.Sci.Usa, 103, 2006
6DS9	Elongated version of a de novo designed three helix bundle structure (GRa3D) 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, THIOCYANATE ION, ... 著者 Koebke, K.J, Ruckthong, L.R, Meagher, J.L, Stuckey, J.A, Pecoraro, V.L. 登録日 2018-06-13 公開日 2018-10-03 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.34 Å) 主引用文献 Clarifying the Copper Coordination Environment in a de Novo Designed Red Copper Protein. Inorg Chem, 57, 2018
7LP0	Crystal structure of BPTF bromodomain in complex with inhibitor Pdy-3-077 分子名称: 1,2-ETHANEDIOL, 4-chlorol-2-methyl-5-[[(3~{R})-1-methylpiperidin-3-yl]amino]pyridazin-3-one, DIMETHYL SULFOXIDE, ... 著者 Chan, A, Schonbrunn, E. 登録日 2021-02-11 公開日 2022-08-10 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.66 Å) 主引用文献 New Design Rules for Developing Potent Cell-Active Inhibitors of the Nucleosome Remodeling Factor (NURF) via BPTF Bromodomain Inhibition. J.Med.Chem., 64, 2021
6DUN	Crystal Structure Analysis of PIN1 分子名称: Peptidyl-prolyl cis-trans isomerase NIMA-interacting 1, TRIHYDROXYARSENITE(III) 著者 Seo, H.-S, Dhe-Paganon, S. 登録日 2018-06-21 公開日 2019-03-06 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.59 Å) 主引用文献 Arsenic targets Pin1 and cooperates with retinoic acid to inhibit cancer-driving pathways and tumor-initiating cells. Nat Commun, 9, 2018
2G6Y	Crystal structure of the novel green fluorescent protein from marine copepod Pontellina plumata 分子名称: green fluorescent protein 2 著者 Evdokimov, A.G, Pokross, M.E, Chudakov, D.M. 登録日 2006-02-26 公開日 2006-03-28 最終更新日 2021-10-20 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Structural basis for the fast maturation of Arthropoda green fluorescent protein. Embo Rep., 7, 2006
6QPG	Influenza A virus Polymerase Heterotrimer A/nt/60/1968(H3N2) in complex with Nanobody NB8205 分子名称: Nanobody NB8205, Polymerase acidic protein, Polymerase basic protein 2, ... 著者 Fan, H.T, Keown, J.R, Fodor, E, Grimes, J.M. 登録日 2019-02-13 公開日 2019-09-04 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (3.34 Å) 主引用文献 Structures of influenza A virus RNA polymerase offer insight into viral genome replication. Nature, 573, 2019
6DJW	Crystal Structure of pParkin (REP and RING2 deleted)-pUb-UbcH7 complex 分子名称: RBR-type E3 ubiquitin transferase,RBR-type E3 ubiquitin transferase, Ubiquitin, Ubiquitin-conjugating enzyme E2 L3, ... 著者 Sauve, V, Sung, G, Trempe, J.F, Gehring, K. 登録日 2018-05-26 公開日 2018-07-04 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (3.801 Å) 主引用文献 Mechanism of parkin activation by phosphorylation. Nat. Struct. Mol. Biol., 25, 2018
4WDI	Weak TCR binding to an unstable insulin epitope drives type 1 diabetes 分子名称: 1,2-ETHANEDIOL, Beta-2-microglobulin, H-2 class I histocompatibility antigen, ... 著者 Rizkallah, P.J, Cole, D.K. 登録日 2014-09-08 公開日 2015-06-24 最終更新日 2015-07-01 実験手法 X-RAY DIFFRACTION (2.313 Å) 主引用文献 Distortion of the Major Histocompatibility Complex Class I Binding Groove to Accommodate an Insulin-derived 10-Mer Peptide. J.Biol.Chem., 290, 2015
4OZE	A.aolicus LpxC in complex with native product 分子名称: CHLORIDE ION, UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase, ZINC ION, ... 著者 Olivier, N.B. 登録日 2014-02-15 公開日 2014-08-13 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.61 Å) 主引用文献 Mechanistic insight from the crystal structure of A.aolicus LpxC in the presence of product To Be Published
6D6K	Structure of polyribonucleotide nucleotidyltransferase from Acinetobacter baumannii 分子名称: Polyribonucleotide nucleotidyltransferase 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2018-04-21 公開日 2018-05-02 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structure of polyribonucleotide nucleotidyltransferase from Acinetobacter baumannii to be published
4V70	E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3) 分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ... 著者 Blau, C, Bock, L.V, Schroder, G.F, Davydov, I, Fischer, N, Stark, H, Rodnina, M.V, Vaiana, A.C, Grubmuller, H. 登録日 2013-10-14 公開日 2014-07-09 最終更新日 2019-12-18 実験手法 ELECTRON MICROSCOPY (17 Å) 主引用文献 Energy barriers and driving forces in tRNA translocation through the ribosome. Nat.Struct.Mol.Biol., 20, 2013
6QUP	Structural signatures in EPR3 define a unique class of plant carbohydrate receptors 分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ISOPROPYL ALCOHOL, ... 著者 Wong, J.E, Gysel, K, Birkefeldt, T.G, Vinther, M, Muszynski, A, Azadi, P, Laursen, N.S, Sullivan, J.T, Ronson, C.W, Stougaard, J, Andersen, K.R. 登録日 2019-02-28 公開日 2020-08-05 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.871 Å) 主引用文献 Structural signatures in EPR3 define a unique class of plant carbohydrate receptors. Nat Commun, 11, 2020
6DP7	Crystal Structure of Bacillus Halodurans Ribonuclease H1 in Complex with an RNA/DNA Hybrid: Reaction in 500 mM Mn2+ and 200 mM K+ for 40 s at 21 C 分子名称: 1,2-ETHANEDIOL, DNA (5'-D(*CP*GP*AP*TP*GP*T)-3'), IODIDE ION, ... 著者 Samara, N.L, Yang, W. 登録日 2018-06-09 公開日 2018-08-15 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (1.381 Å) 主引用文献 Cation trafficking propels RNA hydrolysis. Nat. Struct. Mol. Biol., 25, 2018
6DC3	RSV prefusion F bound to RSD5 Fab 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Fab RSD5-Germline Heavy Chain, Fab RSD5-Germline Light Chain, ... 著者 Battles, M.B, McLellan, J.S, Jones, H.J. 登録日 2018-05-04 公開日 2019-07-10 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (3.501 Å) 主引用文献 Alternative conformations of a major antigenic site on RSV F. Plos Pathog., 15, 2019
2GIC	Crystal Structure of a vesicular stomatitis virus nucleocapsid-RNA complex 分子名称: 45-MER, Nucleocapsid protein, URANYL (VI) ION 著者 Green, T.J, Zhang, X, Wertz, G.W, Luo, M. 登録日 2006-03-28 公開日 2006-08-22 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.92 Å) 主引用文献 Structure of the vesicular stomatitis virus nucleoprotein-RNA complex unveils how the RNA is sequestered Science, 313, 2006
7LER	Netrin-1 filament assembly 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Netrin-1, ... 著者 McDougall, M, Gupta, M, Stetefeld, J. 登録日 2021-01-14 公開日 2022-02-23 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (5.99 Å) 主引用文献 The dynamic nature of netrin-1 and the structural basis for glycosaminoglycan fragment-induced filament formation. Nat Commun, 14, 2023
5KO0	Human Islet Amyloid Polypeptide Segment 15-FLVHSSNNFGA-25 Determined by MicroED 分子名称: THIOCYANATE ION, hIAPP(15-25)WT 著者 Krotee, P.A.L, Rodriguez, J.A, Sawaya, M.R, Cascio, D, Shi, D, Nannenga, B.L, Hattne, J, Reyes, F.E, Gonen, T, Eisenberg, D.S. 登録日 2016-06-28 公開日 2016-12-21 最終更新日 2024-03-06 実験手法 ELECTRON CRYSTALLOGRAPHY (1.4 Å) 主引用文献 Atomic structures of fibrillar segments of hIAPP suggest tightly mated beta-sheets are important for cytotoxicity. Elife, 6, 2017

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