PDB: 5653 件ウェブページステータス検索Chemie searchBIRD

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7KRZ	Human mitochondrial LONP1 in complex with Bortezomib 分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Endogenous co-purified substrate, ... 著者 Shin, M, Watson, E.R, Song, A.S, Mindrebo, J.T, Novick, S.R, Griffin, P, Wiseman, R.L, Lander, G.C. 登録日 2020-11-20 公開日 2021-02-24 最終更新日 2022-06-15 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Structures of the human LONP1 protease reveal regulatory steps involved in protease activation. Nat Commun, 12, 2021
8S55	RNA polymerase II early elongation complex bound to TFIIE and TFIIF - state a (composite structure) 分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit RPB11-a, DNA-directed RNA polymerase II subunit RPB3, ... 著者 Zhan, Y, Grabbe, F, Oberbeckmann, E, Dienemann, C, Cramer, P. 登録日 2024-02-22 公開日 2024-04-17 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Three-step mechanism of promoter escape by RNA polymerase II. Mol.Cell, 84, 2024
8S5N	RNA polymerase II core initially transcribing complex with an ordered RNA of 12 nt 分子名称: DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit RPB11-a, DNA-directed RNA polymerase II subunit RPB3, ... 著者 Zhan, Y, Grabbe, F, Oberbeckmann, E, Dienemann, C, Cramer, P. 登録日 2024-02-24 公開日 2024-04-10 最終更新日 2024-05-15 実験手法 ELECTRON MICROSCOPY (3.4 Å) 主引用文献 Three-step mechanism of promoter escape by RNA polymerase II. Mol.Cell, 84, 2024
4LIL	Crystal structure of the catalytic subunit of human primase bound to UTP and Mn 分子名称: DNA primase small subunit, MANGANESE (II) ION, URIDINE 5'-TRIPHOSPHATE, ... 著者 Vaithiyalingam, S, Eichman, B.F, Chazin, W.J. 登録日 2013-07-02 公開日 2013-12-11 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Insights into Eukaryotic Primer Synthesis from Structures of the p48 Subunit of Human DNA Primase. J.Mol.Biol., 426, 2014
6SR6	Crystal structure of the RAC core with a pseudo substrate bound to Ssz1 SBD 分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Putative heat shock protein, ... 著者 Valentin Gese, G, Lapouge, K, Kopp, J, Sinning, I. 登録日 2019-09-05 公開日 2020-03-25 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 The ribosome-associated complex RAC serves in a relay that directs nascent chains to Ssb. Nat Commun, 11, 2020
4LL1	The structure of the TRX and TXNIP complex 分子名称: Thioredoxin, Thioredoxin-interacting protein 著者 Hwang, J, Kim, M.H. 登録日 2013-07-09 公開日 2014-02-05 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 The structural basis for the negative regulation of thioredoxin by thioredoxin-interacting protein Nat Commun, 5, 2014
5JMA	Crystal structure of Mycobacterium avium SerB2 in complex with serine at catalytic (PSP) domain 分子名称: 1,2-ETHANEDIOL, MAGNESIUM ION, Phosphoserine phosphatase, ... 著者 Shree, S, Dubey, S, Agrawal, A, Ramachandran, R. 登録日 2016-04-28 公開日 2017-05-03 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.03 Å) 主引用文献 Crystal structure of Mycobacterium avium SerB2 in complex with serine at catalytic (PSP) domain To be published
7L7T	BG505 SOSIP reconstructed from a designed nanoparticle, BG505 SOSIP-T33-31 (Component A) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BG505 SOSIP.v5.2(7S) - gp120, ... 著者 Antanasijevic, A, Cannac, F, Sewall, L.M, Ward, A.B. 登録日 2020-12-30 公開日 2021-08-04 最終更新日 2021-08-25 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Polyclonal antibody responses to HIV Env immunogens resolved using cryoEM. Nat Commun, 12, 2021
7L7U	BG505 SOSIP reconstructed from a designed nanoparticle, BG505 SOSIP-T33-31 (Component B) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BG505 SOSIP.v5.2(7S) - gp120, ... 著者 Antanasijevic, A, Froes Rocha, R, Sewall, L.M, Ward, A.B. 登録日 2020-12-30 公開日 2021-08-04 最終更新日 2021-08-25 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Polyclonal antibody responses to HIV Env immunogens resolved using cryoEM. Nat Commun, 12, 2021
6YA4	Crystal structure of PnrA from S. pneumoniae in complex with cytidine 分子名称: 4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE, ACETATE ION, DI(HYDROXYETHYL)ETHER, ... 著者 Batuecas, M.T, Hermoso, J.A. 登録日 2020-03-11 公開日 2021-02-10 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystal Structure and Pathophysiological Role of the Pneumococcal Nucleoside-binding Protein PnrA. J.Mol.Biol., 433, 2021
6YA3	Crystal structure of PnrA from S. pneumoniae in complex with guanosine 分子名称: GUANOSINE, Lipoprotein, NICKEL (II) ION 著者 Batuecas, M.T, Hermoso, J.A. 登録日 2020-03-11 公開日 2021-02-10 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.28 Å) 主引用文献 Crystal Structure and Pathophysiological Role of the Pneumococcal Nucleoside-binding Protein PnrA. J.Mol.Biol., 433, 2021
6YAB	Crystal structure of PnrA from S. pneumoniae in complex with uridine 分子名称: ACETATE ION, CACODYLATE ION, Lipoprotein, ... 著者 Batuecas, M.T, Hermoso, J.A. 登録日 2020-03-12 公開日 2021-02-10 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal Structure and Pathophysiological Role of the Pneumococcal Nucleoside-binding Protein PnrA. J.Mol.Biol., 433, 2021
6Y9U	Crystal structure of PnrA from S. pneumoniae in complex with adenosine 分子名称: ACETATE ION, ADENOSINE, Lipoprotein, ... 著者 Batuecas, M.T, Hermoso, J.A. 登録日 2020-03-10 公開日 2021-02-10 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Crystal Structure and Pathophysiological Role of the Pneumococcal Nucleoside-binding Protein PnrA. J.Mol.Biol., 433, 2021
6YAG	Crystal structure of PnrA from S. pneumoniae in complex with thymidine 分子名称: ACETATE ION, Lipoprotein, NICKEL (II) ION, ... 著者 Batuecas, M.T, Hermoso, J.A. 登録日 2020-03-12 公開日 2021-02-10 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.55 Å) 主引用文献 Crystal Structure and Pathophysiological Role of the Pneumococcal Nucleoside-binding Protein PnrA. J.Mol.Biol., 433, 2021
6TFJ	Vip3Aa protoxin structure 分子名称: Vegetative insecticidal protein 著者 Nunez-Ramirez, R, Huesa, J, Bel, Y, Ferre, J, Casino, P, Arias-Palomo, E. 登録日 2019-11-14 公開日 2020-08-12 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (2.9 Å) 主引用文献 Molecular architecture and activation of the insecticidal protein Vip3Aa from Bacillus thuringiensis. Nat Commun, 11, 2020
4L8B	Crystal structure of the H2Db in complex with the NP-N5H peptide 分子名称: Beta-2-microglobulin, DI(HYDROXYETHYL)ETHER, H-2 class I histocompatibility antigen, ... 著者 Rossjohn, J, Gras, S. 登録日 2013-06-16 公開日 2013-10-16 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Acute emergence and reversion of influenza A virus quasispecies within CD8(+) T cell antigenic peptides. Nat Commun, 4, 2013
7QAZ	Prim-Pol Domain of CRISPR-associated Prim-Pol (CAPP) from Marinitoga sp. 1137 - Primer Initiation Complex 分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, COBALT (II) ION, GUANOSINE-5'-TRIPHOSPHATE, ... 著者 Li, A.W.H, Doherty, A.J. 登録日 2021-11-17 公開日 2022-05-04 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.11 Å) 主引用文献 Molecular basis for the initiation of DNA primer synthesis. Nature, 605, 2022
4NXF	Crystal structure of iLOV-I486(2LT) at pH 8.0 分子名称: FLAVIN MONONUCLEOTIDE, Phototropin-2 著者 Wang, J, Liu, X, Li, J. 登録日 2013-12-09 公開日 2014-09-24 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.766 Å) 主引用文献 Significant expansion of fluorescent protein sensing ability through the genetic incorporation of superior photo-induced electron-transfer quenchers. J.Am.Chem.Soc., 136, 2014
6T64	A model of the EIAV CA-SP hexamer (C6) from Gag-deltaMA spheres assembled at pH6 分子名称: Gag polyprotein 著者 Dick, R.A, Xu, C, Morado, D.R, Kravchuk, V, Ricana, C.L, Lyddon, T.D, Broad, A.M, Feathers, J.R, Johnson, M.C, Vogt, V.M, Perilla, J.R, Briggs, J.A.G, Schur, F.K.M. 登録日 2019-10-17 公開日 2020-01-15 最終更新日 2022-03-30 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Structures of immature EIAV Gag lattices reveal a conserved role for IP6 in lentivirus assembly. Plos Pathog., 16, 2020
7KVT	Crystal structure of Squash RNA aptamer in complex with DFHBI-1T with iridium (III) ions 分子名称: (5Z)-5-(3,5-difluoro-4-hydroxybenzylidene)-2-methyl-3-(2,2,2-trifluoroethyl)-3,5-dihydro-4H-imidazol-4-one, IRIDIUM HEXAMMINE ION, MAGNESIUM ION, ... 著者 Truong, L, Ferre-D'Amare, A.R. 登録日 2020-11-28 公開日 2022-01-19 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2.73 Å) 主引用文献 The fluorescent aptamer Squash extensively repurposes the adenine riboswitch fold. Nat.Chem.Biol., 18, 2022
7KVV	Crystal structure of Squash RNA aptamer in complex with DFHBI-1T 分子名称: (5Z)-5-[(3,5-difluoro-4-hydroxyphenyl)methylidene]-2-[(E)-(hydroxyimino)methyl]-3-methyl-3,5-dihydro-4H-imidazol-4-one, MAGNESIUM ION, Squash RNA aptamer bound to DFHO 著者 Truong, L, Ferre-D'Amare, A.R. 登録日 2020-11-28 公開日 2022-01-19 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.85 Å) 主引用文献 The fluorescent aptamer Squash extensively repurposes the adenine riboswitch fold. Nat.Chem.Biol., 18, 2022
7KVU	Crystal structure of Squash RNA aptamer in complex with DFHBI-1T 分子名称: (5Z)-5-(3,5-difluoro-4-hydroxybenzylidene)-2-methyl-3-(2,2,2-trifluoroethyl)-3,5-dihydro-4H-imidazol-4-one, MAGNESIUM ION, POTASSIUM ION, ... 著者 Truong, L, Ferre-D'Amare, A.R. 登録日 2020-11-28 公開日 2022-01-19 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.68 Å) 主引用文献 The fluorescent aptamer Squash extensively repurposes the adenine riboswitch fold. Nat.Chem.Biol., 18, 2022
6TF9	Structure of the vertebrate gamma-Tubulin Ring Complex 分子名称: Actin, cytoplasmic 1, Belt helices 1,2,3,4, ... 著者 Zupa, E, Pfeffer, S. 登録日 2019-11-13 公開日 2019-12-11 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (4.8 Å) 主引用文献 Insights into the assembly and activation of the microtubule nucleator gamma-TuRC. Nature, 578, 2020
5O5W	Molybdenum storage protein room-temperature structure determined by serial millisecond crystallography 分子名称: (mu3-oxo)-tris(mu2-oxo)-nonakisoxo-trimolybdenum (VI), ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... 著者 Steffen, B, Weinert, T, Ermler, U, Standfuss, J. 登録日 2017-06-02 公開日 2017-09-27 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Serial millisecond crystallography for routine room-temperature structure determination at synchrotrons. Nat Commun, 8, 2017
4M1M	Corrected Structure of Mouse P-glycoprotein 分子名称: MERCURY (II) ION, Multidrug resistance protein 1A 著者 Li, J, Jaimes, K.F, Aller, S.G. 登録日 2013-08-03 公開日 2013-11-13 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (3.8 Å) 主引用文献 Refined structures of mouse P-glycoprotein. Protein Sci., 23, 2014

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