PDB: 5515 件ウェブページステータス検索Chemie searchBIRD

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3ASZ	CMP-complex structure of uridine kinase from Thermus thermophilus HB8 分子名称: CYTIDINE-5'-MONOPHOSPHATE, Uridine kinase 著者 Tomoike, F, Nakagawa, N, Kuramitsu, S, Masui, R. 登録日 2010-12-22 公開日 2011-06-01 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 A Single Amino Acid Limits the Substrate Specificity of Thermus thermophilus Uridine-Cytidine Kinase to Cytidine Biochemistry, 50, 2011
2R1R	RIBONUCLEOTIDE REDUCTASE R1 PROTEIN WITH DTTP OCCUPYING THE SPECIFICITY SITE FROM ESCHERICHIA COLI 分子名称: RIBONUCLEOTIDE REDUCTASE R1 PROTEIN, RIBONUCLEOTIDE REDUCTASE R2 PROTEIN, THYMIDINE-5'-TRIPHOSPHATE 著者 Eriksson, M, Eklund, H. 登録日 1997-07-21 公開日 1998-01-28 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Binding of allosteric effectors to ribonucleotide reductase protein R1: reduction of active-site cysteines promotes substrate binding. Structure, 5, 1997
3AVV	Structure of viral RNA polymerase complex 3 分子名称: CALCIUM ION, Elongation factor Ts, Elongation factor Tu, ... 著者 Takeshita, D, Tomita, K. 登録日 2011-03-08 公開日 2012-01-18 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (3.119 Å) 主引用文献 Molecular basis for RNA polymerization by Q beta replicase Nat.Struct.Mol.Biol., 19, 2012
3AVY	Structure of viral RNA polymerase complex 6 分子名称: 3'-DEOXY-CYTIDINE-5'-TRIPHOSPHATE, CALCIUM ION, Elongation factor Ts, ... 著者 Takeshita, D, Tomita, K. 登録日 2011-03-08 公開日 2012-01-18 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.616 Å) 主引用文献 Molecular basis for RNA polymerization by Q beta replicase Nat.Struct.Mol.Biol., 19, 2012
3ASY	ligand-free structure of uridine kinase from thermus thermophilus HB8 分子名称: Uridine kinase 著者 Tomoike, F, Nakagawa, N, Kuramitsu, S, Masui, R. 登録日 2010-12-22 公開日 2011-06-01 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 A Single Amino Acid Limits the Substrate Specificity of Thermus thermophilus Uridine-Cytidine Kinase to Cytidine Biochemistry, 50, 2011
2QJT	Crystal structure of a bifunctional NMN adenylyltransferase/ADP ribose pyrophosphatase complexed with AMP and MN ion from Francisella tularensis 分子名称: ADENOSINE MONOPHOSPHATE, MANGANESE (II) ION, Nicotinamide-nucleotide adenylyltransferase 著者 Huang, N, Sorci, L, Zhang, X, Brautigan, C, Raffaelli, N, Magni, G, Grishin, N.V, Osterman, A, Zhang, H. 登録日 2007-07-09 公開日 2008-03-04 最終更新日 2017-10-18 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Bifunctional NMN Adenylyltransferase/ADP-Ribose Pyrophosphatase: Structure and Function in Bacterial NAD Metabolism. Structure, 16, 2008
3AV6	Crystal structure of mouse DNA methyltransferase 1 with AdoMet 分子名称: DNA (cytosine-5)-methyltransferase 1, S-ADENOSYLMETHIONINE, ZINC ION 著者 Takeshita, K, Suetake, I, Yamashita, E, Suga, M, Narita, H, Nakagawa, A, Tajima, S. 登録日 2011-02-22 公開日 2011-05-04 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (3.09 Å) 主引用文献 Structural insight into maintenance methylation by mouse DNA methyltransferase 1 (Dnmt1). Proc.Natl.Acad.Sci.USA, 108, 2011
3DSZ	Engineered human lipocalin 2 in complex with Y-DTPA 分子名称: N-{(1S,2S)-2-[bis(carboxymethyl)amino]cyclohexyl}-N-{(2R)-2-[bis(carboxymethyl)amino]-3-[4-({[2-hydroxy-1,1-bis(hydroxymethyl)ethyl]carbamothioyl}amino)phenyl]propyl}glycine, YTTRIUM (III) ION, engineered human lipocalin 2 著者 Eichinger, A, Skerra, A. 登録日 2008-07-14 公開日 2009-05-19 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 High-affinity recognition of lanthanide(III) chelate complexes by a reprogrammed human lipocalin 2 J.Am.Chem.Soc., 131, 2009
3DKI	2.1 A X-ray structure of CysM (Rv1336) from Mycobacterium tuberculosis an O-phosphoserine dependent cysteine synthase 分子名称: Cysteine synthase B, SODIUM ION 著者 Agren, D, Schnell, R, Schneider, G. 登録日 2008-06-25 公開日 2008-09-16 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Cysteine Synthase (CysM) of Mycobacterium tuberculosis Is an O-Phosphoserine Sulfhydrylase: EVIDENCE FOR AN ALTERNATIVE CYSTEINE BIOSYNTHESIS PATHWAY IN MYCOBACTERIA J.Biol.Chem., 283, 2008
2CVS	Structures of Yeast Ribonucleotide Reductase I 分子名称: Ribonucleoside-diphosphate reductase large chain 1 著者 Xu, H, Faber, C, Uchiki, T, Fairman, J.W, Racca, J, Dealwis, C. 登録日 2005-06-14 公開日 2006-03-07 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structures of eukaryotic ribonucleotide reductase I provide insights into dNTP regulation Proc.Natl.Acad.Sci.Usa, 103, 2006
4M2T	Corrected Structure of Mouse P-glycoprotein bound to QZ59-SSS 分子名称: (4S,11S,18S)-4,11,18-tri(propan-2-yl)-6,13,20-triselena-3,10,17,22,23,24-hexaazatetracyclo[17.2.1.1~5,8~.1~12,15~]tetracosa-1(21),5(24),7,12(23),14,19(22)-hexaene-2,9,16-trione, Multidrug resistance protein 1A 著者 Li, J, Jaimes, K.F, Aller, S.G. 登録日 2013-08-05 公開日 2013-11-13 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (4.35 Å) 主引用文献 Refined structures of mouse P-glycoprotein. Protein Sci., 23, 2014
5D4D	Crystal structure of Thermus thermophilus product complex for transcription initiation with NAD and CTP 分子名称: ADENOSINE MONOPHOSPHATE, CYTIDINE-5'-MONOPHOSPHATE, CYTIDINE-5'-TRIPHOSPHATE, ... 著者 Zhang, Y, Ebright, R.H. 登録日 2015-08-07 公開日 2016-07-06 最終更新日 2024-05-29 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 The mechanism of RNA 5' capping with NAD(+), NADH and desphospho-CoA. Nature, 535, 2016
5D6P	Crystal structure of the ATP binding domain of S. aureus GyrB complexed with a ligand 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1-ethyl-3-[4-(hydroxymethyl)-5-(1H-pyrrol-2-yl)-1,3-thiazol-2-yl]urea, DNA gyrase subunit B, ... 著者 Zhang, J, Yang, Q, Cross, J.B, Romero, J.A.C, Ryan, M.D, Lippa, B, Dolle, R.E, Andersen, O.A, Barker, J, Cheng, R.K, Kahmann, J, Felicetti, B, Wood, M, Scheich, C. 登録日 2015-08-12 公開日 2015-11-25 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Discovery of Azaindole Ureas as a Novel Class of Bacterial Gyrase B Inhibitors. J.Med.Chem., 58, 2015
2CVX	Structures of Yeast Ribonucleotide Reductase I 分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ... 著者 Xu, H, Faber, C, Uchiki, T, Fairman, J.W, Racca, J, Dealwis, C. 登録日 2005-06-14 公開日 2006-03-07 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structures of eukaryotic ribonucleotide reductase I provide insights into dNTP regulation Proc.Natl.Acad.Sci.Usa, 103, 2006
2CVT	Structures of Yeast Ribonucleotide Reductase I 分子名称: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Ribonucleoside-diphosphate reductase large chain 1 著者 Xu, H, Faber, C, Uchiki, T, Fairman, J.W, Racca, J, Dealwis, C. 登録日 2005-06-14 公開日 2006-03-07 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Structures of eukaryotic ribonucleotide reductase I provide insights into dNTP regulation Proc.Natl.Acad.Sci.Usa, 103, 2006
5CTB	Humanized yeast ACC carboxyltransferase domain bound to 6,7-dimethyl-1'-[(7-methyl-1H-indazol-5-yl)carbonyl]spiro[chromene-2,4'-piperidin]-4(3H)-one 分子名称: 6,7-dimethyl-1'-[(7-methyl-1H-indazol-5-yl)carbonyl]spiro[chromene-2,4'-piperidin]-4(3H)-one, Acetyl-CoA carboxylase, SULFATE ION 著者 Vajdos, F.F. 登録日 2015-07-23 公開日 2015-10-14 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Discovery of spirocyclic-diamine inhibitors of mammalian acetyl CoA-carboxylase. Bioorg.Med.Chem.Lett., 25, 2015
5D4C	Crystal structure of Thermus thermophilus product complex for transcription initiation with ATP and CTP 分子名称: ADENOSINE-5'-TRIPHOSPHATE, CYTIDINE-5'-MONOPHOSPHATE, CYTIDINE-5'-TRIPHOSPHATE, ... 著者 Zhang, Y, Ebright, R.H. 登録日 2015-08-07 公開日 2016-07-06 最終更新日 2024-07-03 実験手法 X-RAY DIFFRACTION (3.28 Å) 主引用文献 The mechanism of RNA 5' capping with NAD(+), NADH and desphospho-CoA. Nature, 535, 2016
5CX6	Crystal structure of Thosea asigna virus RNA-dependent RNA polymerase (RdRP) complexed with CDP 分子名称: CYTIDINE-5'-DIPHOSPHATE, GLYCEROL, MAGNESIUM ION, ... 著者 Ferrero, D.S, Buxaderas, M, Rodriguez, J.F, Verdaguer, N. 登録日 2015-07-28 公開日 2015-11-11 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 The Structure of the RNA-Dependent RNA Polymerase of a Permutotetravirus Suggests a Link between Primer-Dependent and Primer-Independent Polymerases. Plos Pathog., 11, 2015
2GVX	Structure of diisopropyl fluorophosphatase (DFPase), mutant D229N / N175D 分子名称: CALCIUM ION, diisopropyl fluorophosphatase 著者 Blum, M.-M, Lohr, F, Richardt, A, Ruterjans, H, Chen, J.C.-H. 登録日 2006-05-03 公開日 2006-09-19 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Binding of a Designed Substrate Analogue to Diisopropyl Fluorophosphatase: Implications for the Phosphotriesterase Mechanism J.Am.Chem.Soc., 128, 2006
5CYR	Crystal structure of Thosea asigna virus RNA-dependent RNA polymerase (RdRP) complexed with ATP and ssRNA 分子名称: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ... 著者 Ferrero, D.S, Buxaderas, M, Rodriguez, J.F, Verdaguer, N. 登録日 2015-07-30 公開日 2015-11-11 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.504 Å) 主引用文献 The Structure of the RNA-Dependent RNA Polymerase of a Permutotetravirus Suggests a Link between Primer-Dependent and Primer-Independent Polymerases. Plos Pathog., 11, 2015
3DTQ	Engineered human lipocalin 2 with specificity for Y-DTPA, apo-form 分子名称: Neutrophil gelatinase-associated lipocalin 著者 Eichinger, A, Skerra, A. 登録日 2008-07-15 公開日 2009-05-12 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 High-affinity recognition of lanthanide(III) chelate complexes by a reprogrammed human lipocalin 2. J.Am.Chem.Soc., 131, 2009
5D98	Influenza C Virus RNA-dependent RNA Polymerase - Space group P43212 分子名称: MAGNESIUM ION, Polymerase acidic protein, Polymerase basic protein 2, ... 著者 Hengrung, N, El Omari, K, Serna Martin, I, Vreede, F.T, Cusack, S, Rambo, R.P, Vonrhein, C, Bricogne, G, Stuart, D.I, Grimes, J.M, Fodor, E. 登録日 2015-08-18 公開日 2015-10-21 最終更新日 2017-09-13 実験手法 X-RAY DIFFRACTION (3.9 Å) 主引用文献 Crystal structure of the RNA-dependent RNA polymerase from influenza C virus. Nature, 527, 2015
5CTE	Humanized yeast ACC carboxyltransferase domain bound to 2,2-dimethylpropyl (1S)-1-methyl-8-[(7-methyl-1H-indazol-5-yl)carbonyl]-2,8-diazaspiro[4.5]decane-2-carboxylate 分子名称: 2,2-dimethylpropyl (1S)-1-methyl-8-[(7-methyl-1H-indazol-5-yl)carbonyl]-2,8-diazaspiro[4.5]decane-2-carboxylate, Acetyl-CoA carboxylase, SULFATE ION 著者 Vajdos, F.F. 登録日 2015-07-23 公開日 2015-10-14 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.34 Å) 主引用文献 Discovery of spirocyclic-diamine inhibitors of mammalian acetyl CoA-carboxylase. Bioorg.Med.Chem.Lett., 25, 2015
2R5W	Crystal structure of a bifunctional NMN adenylyltransferase/ADP ribose pyrophosphatase from Francisella tularensis 分子名称: CHLORIDE ION, MAGNESIUM ION, Nicotinamide-nucleotide adenylyltransferase 著者 Huang, N, Sorci, L, Zhang, X, Brautigan, C, Li, X, Raffaelli, N, Grishin, N, Osterman, A, Zhang, H. 登録日 2007-09-04 公開日 2008-03-04 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Bifunctional NMN Adenylyltransferase/ADP-Ribose Pyrophosphatase: Structure and Function in Bacterial NAD Metabolism. Structure, 16, 2008
2RBL	High resolution design of a protein loop 分子名称: Tenascin 著者 Hu, X, Wang, H, Ke, H, Kuhlman, B. 登録日 2007-09-19 公開日 2007-11-20 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 High-resolution design of a protein loop. Proc.Natl.Acad.Sci.Usa, 104, 2007

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