PDB: 45118 件ウェブページステータス検索Chemie searchBIRD

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378D	STRUCTURE OF THE SIDE-BY-SIDE BINDING OF DISTAMYCIN TO DNA 分子名称: DISTAMYCIN A, DNA (5'-D(*GP*TP*AP*TP*AP*TP*AP*C)-3'), SODIUM ION 著者 Mitra, S.N, Wahl, M.C, Sundaralingam, M. 登録日 1998-01-28 公開日 1999-03-04 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structure of the side-by-side binding of distamycin to d(GTATATAC)2. Acta Crystallogr.,Sect.D, 55, 1999
6IFF	Crystal structure of M1 zinc metallopeptidase E323A mutant from Deinococcus radiodurans 分子名称: SODIUM ION, TYROSINE, ZINC ION, ... 著者 Agrawal, R, Kumar, A, Kumar, A, Gaur, N.K, Makde, R.D. 登録日 2018-09-20 公開日 2019-09-25 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.83 Å) 主引用文献 Structural basis for the unusual substrate specificity of unique two-domain M1 metallopeptidase. Int.J.Biol.Macromol., 147, 2020
6ILR	Structure of Arabidopsis thaliana Ribokinase in unligand form 分子名称: Ribokinase, SODIUM ION, TETRAETHYLENE GLYCOL 著者 Kang, P, Oh, J, Rhee, S. 登録日 2018-10-19 公開日 2019-03-13 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.972 Å) 主引用文献 Crystal structure and mutational analyses of ribokinase from Arabidopsis thaliana. J. Struct. Biol., 206, 2019
6IPF	Post-catalytic Complex of Human DNA Polymerase Mu with Templating Cytosine and Mn-8oxodGMP 分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, ... 著者 Chang, Y.K, Wu, W.J, Tsai, M.D. 登録日 2018-11-03 公開日 2019-05-29 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.77 Å) 主引用文献 Human DNA Polymerase mu Can Use a Noncanonical Mechanism for Multiple Mn2+-Mediated Functions. J.Am.Chem.Soc., 141, 2019
3A07	Crystal Structure of Actinohivin; Potent anti-HIV Protein 分子名称: Actinohivin, SODIUM ION 著者 Tsunoda, M, Suzuki, K, Sagara, T, Takenaka, A. 登録日 2009-03-04 公開日 2009-08-25 最終更新日 2017-10-11 実験手法 X-RAY DIFFRACTION (1.19 Å) 主引用文献 Mechanism by which the lectin actinohivin blocks HIV infection of target cells Proc.Natl.Acad.Sci.USA, 106, 2009
6IPD	Post-catalytic Complex of Human DNA Polymerase Mu with Templating Adenine and Mn-8oxodGMP 分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, DNA (5'-D(*CP*GP*GP*CP*AP*TP*AP*CP*G)-3'), ... 著者 Chang, Y.K, Wu, W.J, Tsai, M.D. 登録日 2018-11-03 公開日 2019-05-29 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Human DNA Polymerase mu Can Use a Noncanonical Mechanism for Multiple Mn2+-Mediated Functions. J.Am.Chem.Soc., 141, 2019
4BDR	Crystal structure of the GluK2 R775A LBD dimer in complex with kainate 分子名称: 3-(CARBOXYMETHYL)-4-ISOPROPENYLPROLINE, CHLORIDE ION, GLUTAMATE RECEPTOR, ... 著者 Nayeem, N, Mayans, O, Green, T. 登録日 2012-10-05 公開日 2013-04-10 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Correlating Efficacy and Desensitization with Gluk2 Ligand-Binding Domain Movements. Open Biol., 3, 2013
4AW1	Human PDK1 Kinase Domain in Complex with Allosteric Compound PS210 Bound to the PIF-Pocket 分子名称: 3-PHOSPHOINOSITIDE-DEPENDENT PROTEIN KINASE 1, ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, ... 著者 Schulze, J.O, Busschots, K, Lopez-Garcia, L.A, Lammi, C, Stroba, A, Zeuzem, S, Piiper, A, Alzari, P.M, Neimanis, S, Arencibia, J.M, Engel, M, Biondi, R.M. 登録日 2012-05-30 公開日 2012-10-03 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.68 Å) 主引用文献 Substrate-Selective Inhibition of Protein Kinase Pdk1 by Small Compounds that Bind to the Pif-Pocket Allosteric Docking Site. Chem.Biol., 19, 2012
4DOB	Ternary complex of DNA polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-monochlororomethylene triphosphate: Stereoselective binding of R-isomer 分子名称: 5'-O-[(R)-{[(R)-[(R)-chloro(phosphono)methyl](hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]-2'-deoxyguanosine, C C G A C C G C G C A T C A G C, CHLORIDE ION, ... 著者 Batra, V.K. 登録日 2012-02-09 公開日 2012-06-13 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Beta,Gamma-CHF- and beta,gamma-CHCl-dGTP Diastereomers: Synthesis, Discrete (31)P NMR Signatures, and Absolute Configurations of New Stereochemical Probes for DNA Polymerases J.Am.Chem.Soc., 134, 2012
6H7L	ACTIVATED TURKEY BETA1 ADRENOCEPTOR WITH BOUND PARTIAL AGONIST DOBUTAMINE AND NANOBODY Nb6B9 分子名称: Beta-1 adrenergic receptor, Camelid antibody fragment Nb6B9, DOBUTAMINE, ... 著者 Warne, T, Edwards, P.C, Dore, A.S, Leslie, A.G.W, Tate, C.G. 登録日 2018-07-31 公開日 2018-10-17 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Molecular basis for high-affinity agonist binding in GPCRs. Science, 364, 2019
6H7O	ACTIVATED TURKEY BETA1 ADRENOCEPTOR WITH BOUND WEAK PARTIAL AGONIST CYANOPINDOLOL AND NANOBODY Nb6B9 分子名称: 4-{[(2S)-3-(tert-butylamino)-2-hydroxypropyl]oxy}-3H-indole-2-carbonitrile, Beta-1 adrenergic receptor, Camelid antibody fragment Nb6B9, ... 著者 Warne, T, Edwards, P.C, Dore, A.S, Leslie, A.G.W, Tate, C.G. 登録日 2018-07-31 公開日 2018-10-17 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Molecular basis for high-affinity agonist binding in GPCRs. Science, 364, 2019
6GW1	GII.10 human norovirus protruding domain in complex with glycochenodeoxycholate (GCDCA) 分子名称: Capsid protein, GLYCOCHENODEOXYCHOLIC ACID, SODIUM ION 著者 Kilic, T, Hansman, G.S. 登録日 2018-06-21 公開日 2018-10-17 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structural Basis for Human Norovirus Capsid Binding to Bile Acids. J. Virol., 93, 2019
4DOA	Ternary complex of dna polymerase beta with a dideoxy terminated primer and 2'-deoxyguanosine 5'-beta, gamma-monofluoromethylene triphosphate: non-interactive binding of s-isomer 分子名称: 2'-deoxy-5'-O-[(R)-{[(R)-[(S)-fluoro(phosphono)methyl](hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]guanosine, C C G A C C G C G C A T C A G C, CHLORIDE ION, ... 著者 Batra, V.K. 登録日 2012-02-09 公開日 2012-06-13 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.051 Å) 主引用文献 Beta,gamma-CHF- and beta,gamma-CHCl-dGTP Diastereomers: Synthesis, Discrete (31)P NMR Signatures, and Absolute Configurations of New Stereochemical Probes for DNA Polymerases J.Am.Chem.Soc., 134, 2012
6J6V	Crystal structure of heat shock factor 4-DBD 分子名称: Heat shock factor protein 4, NITRATE ION, SODIUM ION 著者 Guo, L, Xiao, Z.Y, Wang, S, Liu, W. 登録日 2019-01-16 公開日 2020-01-22 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 Structure of heat shock factor 4-DBD at 1.20 Angstroms resolution. To Be Published
6IX5	The structure of LepI complex with SAM and its substrate analogue 分子名称: 1,2-ETHANEDIOL, 4-hydroxy-3-[(2S,6E,8E)-2-methyldeca-6,8-dienoyl]-5-phenylpyridin-2(1H)-one, CHLORIDE ION, ... 著者 Cai, Y, Ohashi, M, Hai, Y, Tang, Y, Zhou, J. 登録日 2018-12-09 公開日 2019-07-17 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structural basis for stereoselective dehydration and hydrogen-bonding catalysis by the SAM-dependent pericyclase LepI. Nat.Chem., 11, 2019
1O00	Human mitochondrial aldehyde dehydrogenase complexed with NAD+ and Mg2+ showing dual NAD(H) conformations 分子名称: Aldehyde dehydrogenase, MAGNESIUM ION, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ... 著者 Perez-Miller, S.J, Hurley, T.D. 登録日 2003-02-20 公開日 2003-06-24 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Coenzyme isomerization is integral to catalysis in aldehyde dehydrogenase Biochemistry, 42, 2003
1OCO	BOVINE HEART CYTOCHROME C OXIDASE IN CARBON MONOXIDE-BOUND STATE 分子名称: CARBON MONOXIDE, COPPER (II) ION, CYTOCHROME C OXIDASE, ... 著者 Tsukihara, T, Yao, M. 登録日 1998-07-09 公開日 1999-07-22 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Redox-coupled crystal structural changes in bovine heart cytochrome c oxidase. Science, 280, 1998
4B6C	Structure of the M. smegmatis GyrB ATPase domain in complex with an aminopyrazinamide 分子名称: 6-(3,4-dimethylphenyl)-3-[[4-[3-(4-methylpiperazin-1-yl)propoxy]phenyl]amino]pyrazine-2-carboxamide, DNA gyrase subunit B,DNA gyrase subunit B,DNA gyrase subunit B, SODIUM ION 著者 Tucker, J.A, Shirude, P.S, Madhavapeddi, P, Hussein, S, Basu, R, Ghorpade, S. 登録日 2012-08-09 公開日 2013-01-23 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Aminopyrazinamides: novel and specific GyrB inhibitors that kill replicating and nonreplicating Mycobacterium tuberculosis. ACS Chem. Biol., 8, 2013
6HBX	The structure of the G. violaceus guanidine II riboswitch P2 stem-loop with ethylguanidine 分子名称: N-ETHYLGUANIDINE, RNA (5'-R(*GP*GP*UP*GP*GP*GP*GP*AP*CP*GP*AP*CP*CP*CP*CP*AP*(CBV)P*C)-3'), SODIUM ION, ... 著者 Huang, L, Lilley, D.M.J. 登録日 2018-08-13 公開日 2019-02-20 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (1.54 Å) 主引用文献 Structure-guided design of a high-affinity ligand for a riboswitch. Rna, 25, 2019
4D0P	Crystal structure of human CSN4 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, COP9 SIGNALOSOME COMPLEX SUBUNIT 4, ... 著者 Bunker, R.D, Lingaraju, G.M, Thoma, N.H. 登録日 2014-04-29 公開日 2014-07-23 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Crystal Structure of the Cop9 Signalosome Nature, 512, 2014
6HDZ	Pseudomonas aeruginosa Seryl-tRNA Synthetase in Complex with 5'-O-(N-(L-seryl)-Sulfamoyl)uridine 分子名称: 1,2-ETHANEDIOL, 5'-O-(N-(L-seryl)-Sulfamoyl)uridine, SODIUM ION, ... 著者 Pang, L, De Graef, S, Strelkov, S.V, Weeks, S.D. 登録日 2018-08-20 公開日 2019-12-04 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.06 Å) 主引用文献 Structural Insights into the Binding of Natural Pyrimidine-Based Inhibitors of Class II Aminoacyl-tRNA Synthetases. Acs Chem.Biol., 15, 2020
1OCZ	BOVINE HEART CYTOCHROME C OXIDASE IN AZIDE-BOUND STATE 分子名称: AZIDE ION, COPPER (II) ION, CYTOCHROME C OXIDASE, ... 著者 Tsukihara, T, Yao, M. 登録日 1998-07-13 公開日 1999-07-22 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Redox-coupled crystal structural changes in bovine heart cytochrome c oxidase. Science, 280, 1998
3SJL	Crystal Structure of the P107S-MauG/pre-Methylamine Dehydrogenase Complex 分子名称: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ... 著者 Jensen, L.M.R, Wilmot, C.M. 登録日 2011-06-21 公開日 2012-05-02 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (1.63 Å) 主引用文献 Proline 107 is a major determinant in maintaining the structure of the distal pocket and reactivity of the high-spin heme of MauG. Biochemistry, 51, 2012
1OCR	BOVINE HEART CYTOCHROME C OXIDASE IN THE FULLY REDUCED STATE 分子名称: COPPER (II) ION, CYTOCHROME C OXIDASE, HEME-A, ... 著者 Tsukihara, T, Yao, M. 登録日 1998-07-07 公開日 1999-07-29 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Redox-coupled crystal structural changes in bovine heart cytochrome c oxidase. Science, 280, 1998
6J3B	Crystal structure of human DHODH in complex with inhibitor 1289 分子名称: (6R)-1-[3,5-bis(fluoranyl)-4-[2-fluoranyl-5-(hydroxymethyl)phenyl]phenyl]-6-propan-2-yl-6,7-dihydro-5H-benzotriazol-4-one, ACETATE ION, CHLORIDE ION, ... 著者 Yu, Y, Chen, Q. 登録日 2019-01-04 公開日 2019-08-21 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 A novel series of human dihydroorotate dehydrogenase inhibitors discovered by in vitro screening: inhibition activity and crystallographic binding mode. Febs Open Bio, 9, 2019

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