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2N3W
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BU of 2n3w by Molmil
Solution structure of the Rpn1 T1 site with K48-linked diubiquitin in the contracted binding mode
分子名称: 26S proteasome regulatory subunit RPN1, Ubiquitin-60S ribosomal protein L40
著者Chen, X, Walters, K.J.
登録日2015-06-10
公開日2016-02-24
最終更新日2024-11-06
実験手法SOLUTION NMR
主引用文献Rpn1 provides adjacent receptor sites for substrate binding and deubiquitination by the proteasome.
Science, 351, 2016
2N3V
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Solution structure of the Rpn1 T1 site with K48-linked diubiquitin in the extended binding mode
分子名称: 26S proteasome regulatory subunit RPN1, Ubiquitin-60S ribosomal protein L40
著者Chen, X, Walters, K.J.
登録日2015-06-10
公開日2016-02-24
最終更新日2024-11-06
実験手法SOLUTION NMR
主引用文献Rpn1 provides adjacent receptor sites for substrate binding and deubiquitination by the proteasome.
Science, 351, 2016
2NBW
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BU of 2nbw by Molmil
Solution structure of the Rpn1 T1 site with the Rad23 UBL domain
分子名称: 26S proteasome regulatory subunit RPN1, UV excision repair protein RAD23
著者Chen, X, Walters, K.J.
登録日2016-03-14
公開日2016-07-20
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structures of Rpn1 T1:Rad23 and hRpn13:hPLIC2 Reveal Distinct Binding Mechanisms between Substrate Receptors and Shuttle Factors of the Proteasome.
Structure, 24, 2016
1KC8
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BU of 1kc8 by Molmil
Co-crystal Structure of Blasticidin S Bound to the 50S Ribosomal Subunit
分子名称: 23S RRNA, 5S RRNA, BLASTICIDIN S, ...
著者Hansen, J.L, Ban, N, Nissen, P, Moore, P.B, Steitz, T.A.
登録日2001-11-07
公開日2003-07-22
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (3.01 Å)
主引用文献Structures of Five Antibiotics Bound at the Peptidyl Transferase Center of the Large Ribosomal Subunit
J.Mol.Biol., 330, 2003
2VDH
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BU of 2vdh by Molmil
Crystal structure of Chlamydomonas reinhardtii Rubisco with a large- subunit C172S mutation
分子名称: 1,2-ETHANEDIOL, 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, ...
著者Garcia-Murria, M.-J, Karkehabadi, S, Marin-Navarro, J, Satagopan, S, Andersson, I, Spreitzer, R.J, Moreno, J.
登録日2007-10-09
公開日2008-11-04
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural and Functional Consequences of the Replacement of Proximal Residues Cys-172 and Cys-192 in the Large Subunit of Ribulose 1,5-Bisphosphate Carboxylase/Oxygenase from Chlamydomonas Reinhardtii
Biochem.J., 411, 2008
1KD1
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BU of 1kd1 by Molmil
Co-crystal Structure of Spiramycin bound to the 50S Ribosomal Subunit of Haloarcula marismortui
分子名称: 23S RRNA, 5S RRNA, CADMIUM ION, ...
著者Hansen, J.L, Ippolito, J.A, Ban, N, Nissen, P, Moore, P.B, Steitz, T.A.
登録日2001-11-12
公開日2002-07-19
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献The structures of four macrolide antibiotics bound to the large ribosomal subunit.
Mol.Cell, 10, 2002
1KP8
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BU of 1kp8 by Molmil
Structural Basis for GroEL-assisted Protein Folding from the Crystal Structure of (GroEL-KMgATP)14 at 2.0 A Resolution
分子名称: MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER, POTASSIUM ION, ...
著者Wang, J.
登録日2001-12-30
公開日2003-03-25
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Basis for GroEL-assisted Protein Folding from the Crystal Structure of (GroEL-KMgATP)14 at 2.0 A Resolution
J.Mol.Biol., 327, 2003
2V63
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BU of 2v63 by Molmil
Crystal structure of Rubisco from Chlamydomonas reinhardtii with a large-subunit V331A mutation
分子名称: 1,2-ETHANEDIOL, 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, ...
著者Karkehabadi, S, Satagopagan, S, Taylor, T.C, Spreitzer, R.J, Andersson, I.
登録日2007-07-13
公開日2007-07-31
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural Analysis of Altered Large-Subunit Loop-6-Carboxy-Terminus Interactions that Influence Catalytic Efficiency and Co2 O2 Specificity of Ribulose-1,5-Bisphosphate Carboxylase Oxygenase
Biochemistry, 46, 2007
2V68
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Crystal structure of Chlamydomonas reinhardtii Rubisco with large- subunit mutations V331A, T342I
分子名称: 1,2-ETHANEDIOL, 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, ...
著者Karkehabadi, S, Satagopan, S, Taylor, T.C, Spreitzer, R.J, Andersson, I.
登録日2007-07-13
公開日2007-08-07
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural Analysis of Altered Large-Subunit Loop-6-Carboxy-Terminus Interactions that Influence Catalytic Efficiency and Co2 O2 Specificity of Ribulose-1,5-Bisphosphate Carboxylase Oxygenase
Biochemistry, 46, 2007
2V67
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BU of 2v67 by Molmil
Crystal structure of Chlamydomonas reinhardtii Rubisco with a large- subunit supressor mutation T342I
分子名称: 1,2-ETHANEDIOL, 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, ...
著者Karkehabadi, S, Satagopan, S, Taylor, T.C, Spreitzer, R.J, Andersson, I.
登録日2007-07-13
公開日2007-08-07
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural Analysis of Altered Large-Subunit Loop-6-Carboxy-Terminus Interactions that Influence Catalytic Efficiency and Co2 O2 Specificity of Ribulose-1,5-Bisphosphate Carboxylase Oxygenase
Biochemistry, 46, 2007
2V6A
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BU of 2v6a by Molmil
Crystal structure of Chlamydomonas reinhardtii Rubisco with large- subunit mutations V331A, G344S
分子名称: 1,2-ETHANEDIOL, 2-CARBOXYARABINITOL-1,5-DIPHOSPHATE, MAGNESIUM ION, ...
著者Karkehabadi, S, Satagopan, S, Taylor, T.C, Spreitzer, R.J, Andersson, I.
登録日2007-07-14
公開日2007-07-31
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural Analysis of Altered Large-Subunit Loop-6-Carboxy-Terminus Interactions that Influence Catalytic Efficiency and Co2-O2 Specificity of Ribulose-1,5-Bisphosphate Carboxylase Oxygenase
Biochemistry, 46, 2007
1RQB
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BU of 1rqb by Molmil
Propionibacterium shermanii transcarboxylase 5S subunit
分子名称: COBALT (II) ION, transcarboxylase 5S subunit
著者Hall, P.R, Zheng, R, Antony, L, Pusztai-Carey, M, Carey, P.R, Yee, V.C.
登録日2003-12-04
公開日2004-09-07
最終更新日2025-03-26
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Transcarboxylase 5S structures: assembly and catalytic mechanism of a multienzyme complex subunit.
Embo J., 23, 2004
1RR2
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BU of 1rr2 by Molmil
Propionibacterium shermanii transcarboxylase 5S subunit bound to 2-ketobutyric acid
分子名称: 2-KETOBUTYRIC ACID, COBALT (II) ION, transcarboxylase 5S subunit
著者Hall, P.R, Zheng, R, Antony, L, Pusztai-Carey, M, Carey, P.R, Yee, V.C.
登録日2003-12-08
公開日2004-09-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Transcarboxylase 5S structures: assembly and catalytic mechanism of a multienzyme complex subunit.
Embo J., 23, 2004
1RQH
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BU of 1rqh by Molmil
Propionibacterium shermanii transcarboxylase 5S subunit bound to pyruvic acid
分子名称: COBALT (II) ION, PYRUVIC ACID, transcarboxylase 5S subunit
著者Hall, P.R, Zheng, R, Antony, L, Pusztai-Carey, M, Carey, P.R, Yee, V.C.
登録日2003-12-05
公開日2004-09-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Transcarboxylase 5S structures: assembly and catalytic mechanism of a multienzyme complex subunit.
Embo J., 23, 2004
8YMO
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BU of 8ymo by Molmil
OSCA1.1-F516A pre-open 1
分子名称: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, Protein OSCA1
著者Zhang, M.F.
登録日2024-03-09
公開日2024-10-02
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Activation mechanisms of dimeric mechanosensitive OSCA/TMEM63 channels.
Nat Commun, 15, 2024
8YMN
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BU of 8ymn by Molmil
OSCA1.1-F516A pre-open 2
分子名称: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, Protein OSCA1
著者Zhang, M.F.
登録日2024-03-09
公開日2024-10-02
実験手法ELECTRON MICROSCOPY (2.5 Å)
主引用文献Activation mechanisms of dimeric mechanosensitive OSCA/TMEM63 channels.
Nat Commun, 15, 2024
8YMQ
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BU of 8ymq by Molmil
OSCA1.1-F516A nanodisc
分子名称: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, Protein OSCA1
著者Zhang, M.F.
登録日2024-03-09
公開日2024-10-02
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Activation mechanisms of dimeric mechanosensitive OSCA/TMEM63 channels.
Nat Commun, 15, 2024
8YMP
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BU of 8ymp by Molmil
OSCA1.1-F516A nanodisc in LPC
分子名称: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, Protein OSCA1
著者Zhang, M.F.
登録日2024-03-09
公開日2024-10-02
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Activation mechanisms of dimeric mechanosensitive OSCA/TMEM63 channels.
Nat Commun, 15, 2024
8YMM
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BU of 8ymm by Molmil
OSCA1.1-F516A open
分子名称: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, Protein OSCA1
著者Zhang, M.F.
登録日2024-03-09
公開日2024-10-02
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Activation mechanisms of dimeric mechanosensitive OSCA/TMEM63 channels.
Nat Commun, 15, 2024
1S3H
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BU of 1s3h by Molmil
Propionibacterium shermanii transcarboxylase 5S subunit A59T
分子名称: COBALT (II) ION, transcarboxylase 5S subunit
著者Hall, P.R, Zheng, R, Antony, L, Pusztai-Carey, M, Carey, P.R, Yee, V.C.
登録日2004-01-13
公開日2004-09-07
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Transcarboxylase 5S structures: assembly and catalytic mechanism of a multienzyme complex subunit.
Embo J., 23, 2004
1RQE
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BU of 1rqe by Molmil
Propionibacterium shermanii transcarboxylase 5S subunit bound to oxaloacetate
分子名称: COBALT (II) ION, OXALOACETATE ION, transcarboxylase 5S subunit
著者Hall, P.R, Zheng, R, Antony, L, Pusztai-Carey, M, Carey, P.R, Yee, V.C.
登録日2003-12-05
公開日2004-09-07
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Transcarboxylase 5S structures: assembly and catalytic mechanism of a multienzyme complex subunit.
Embo J., 23, 2004
6KXK
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BU of 6kxk by Molmil
BON1
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
著者Wang, Q.C, Jiang, M.Q, Isupov, M.N, Sun, L.F, Wu, Y.K.
登録日2019-09-12
公開日2020-09-16
最終更新日2024-03-27
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal Structure of an Arabidopsis Copine providing insights into this protein family
To be published
6L4T
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BU of 6l4t by Molmil
Structure of the peripheral FCPI from diatom
分子名称: (3S,3'R,5R,6S,7cis)-7',8'-didehydro-5,6-dihydro-5,6-epoxy-beta,beta-carotene-3,3'-diol, (3S,3'S,5R,5'R,6S,6'R,8'R)-3,5'-dihydroxy-8-oxo-6',7'-didehydro-5,5',6,6',7,8-hexahydro-5,6-epoxy-beta,beta-caroten-3'- yl acetate, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
著者Nagao, R, Kato, K, Miyazaki, N, Akita, F, Shen, J.R.
登録日2019-10-21
公開日2020-05-20
最終更新日2025-04-09
実験手法ELECTRON MICROSCOPY (2.6 Å)
主引用文献Structure of photosystem I-light-harvesting supercomplex from a red-lineage diatom
Nat Commun, 2020
6L4U
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Structure of the PSI-FCPI supercomplex from diatom
分子名称: (3S,3'R,5R,6S,7cis)-7',8'-didehydro-5,6-dihydro-5,6-epoxy-beta,beta-carotene-3,3'-diol, (3S,3'S,5R,5'R,6S,6'R,8'R)-3,5'-dihydroxy-8-oxo-6',7'-didehydro-5,5',6,6',7,8-hexahydro-5,6-epoxy-beta,beta-caroten-3'- yl acetate, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, ...
著者Nagao, R, Kato, K, Miyazaki, N, Akita, F, Shen, J.R.
登録日2019-10-21
公開日2020-05-20
最終更新日2025-04-09
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Structure of photosystem I-light-harvesting supercomplex from a red-lineage diatom
Nat Commun, 2020
6X63
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Atomic-Resolution Structure of HIV-1 Capsid Tubes by Magic Angle Spinning NMR
分子名称: HIV-1 capsid protein
著者Lu, M, Russell, R.W, Bryer, A, Quinn, C.M, Hou, G, Zhang, H, Schwieters, C.D, Perilla, J.R, Gronenborn, A.M, Polenova, T.
登録日2020-05-27
公開日2020-09-02
最終更新日2024-05-15
実験手法SOLID-STATE NMR
主引用文献Atomic-resolution structure of HIV-1 capsid tubes by magic-angle spinning NMR.
Nat.Struct.Mol.Biol., 27, 2020

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件を2025-07-09に公開中

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