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7UWQ
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BU of 7uwq by Molmil
Klebsiella pneumoniae adenosine monophosphate nucleosidase
分子名称: AMP nucleosidase
著者Richardson, B.C, French, J.B.
登録日2022-05-03
公開日2022-09-28
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.05 Å)
主引用文献Structure of Klebsiella pneumoniae adenosine monophosphate nucleosidase.
Plos One, 17, 2022
6N2G
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BU of 6n2g by Molmil
Crystal structure of Caenorhabditis elegans NAP1
分子名称: Nucleosome Assembly Protein
著者Bhattacharyya, S, DArcy, S.
登録日2018-11-13
公開日2019-01-30
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (3.003 Å)
主引用文献Characterization of Caenorhabditis elegans Nucleosome Assembly Protein 1 Uncovers the Role of Acidic Tails in Histone Binding.
Biochemistry, 58, 2019
8C6J
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BU of 8c6j by Molmil
Human spliceosomal PM5 C* complex
分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent RNA helicase DHX8, ...
著者Dybkov, O, Kastner, B, Luehrmann, R.
登録日2023-01-12
公開日2023-07-12
最終更新日2024-11-06
実験手法ELECTRON MICROSCOPY (2.8 Å)
主引用文献Regulation of 3' splice site selection after step 1 of splicing by spliceosomal C* proteins.
Sci Adv, 9, 2023
3EE3
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BU of 3ee3 by Molmil
Crystal structure of Acanthamoeba polyphaga mimivirus nucleoside diphosphate kinase complexed with CDP
分子名称: CYTIDINE-5'-DIPHOSPHATE, MAGNESIUM ION, Nucleoside diphosphate kinase
著者Jeudy, S, Lartigue, A, Claverie, J.M, Abergel, C.
登録日2008-09-04
公開日2009-06-16
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Dissecting the unique nucleotide specificity of mimivirus nucleoside diphosphate kinase.
J.Virol., 83, 2009
3EIC
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BU of 3eic by Molmil
X-ray structure of Acanthamoeba ployphaga mimivirus nucleoside diphosphate kinase complexed with UDP
分子名称: MAGNESIUM ION, Nucleoside diphosphate kinase, URIDINE-5'-DIPHOSPHATE
著者Jeudy, S, Lartigue, A, Claverie, J.M, Abergel, C.
登録日2008-09-15
公開日2009-06-16
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Dissecting the unique nucleotide specificity of mimivirus nucleoside diphosphate kinase.
J.Virol., 83, 2009
3ELH
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BU of 3elh by Molmil
X-ray structure of Acanthamoeba ployphaga mimivirus nucleoside diphosphate kinase complexed with dUDP
分子名称: DEOXYURIDINE-5'-DIPHOSPHATE, MAGNESIUM ION, Nucleoside diphosphate kinase
著者Jeudy, S, Lartigue, A, Claverie, J.M, Abergel, C.
登録日2008-09-22
公開日2009-06-16
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Dissecting the unique nucleotide specificity of mimivirus nucleoside diphosphate kinase.
J.Virol., 83, 2009
1GQV
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BU of 1gqv by Molmil
Atomic Resolution (0.98A) Structure of Eosinophil-Derived Neurotoxin
分子名称: ACETATE ION, EOSINOPHIL-DERIVED NEUROTOXIN
著者Swaminathan, G.J, Holloway, D.E, Veluraja, K, Acharya, K.R.
登録日2001-12-05
公開日2002-03-08
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (0.98 Å)
主引用文献Atomic Resolution (0.98 A) Structure of Eosinophil-Derived Neurotoxin
Biochemistry, 41, 2002
6ZYM
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BU of 6zym by Molmil
Human C Complex Spliceosome - High-resolution CORE
分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, Cell division cycle 5-like protein, Corepressor interacting with RBPJ 1, ...
著者Bertram, K, Kastner, B.
登録日2020-08-02
公開日2020-10-14
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural Insights into the Roles of Metazoan-Specific Splicing Factors in the Human Step 1 Spliceosome.
Mol.Cell, 80, 2020
8D38
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BU of 8d38 by Molmil
Structure of a purine nucleoside phosphorylase from Geobacillus stearothermophilus
分子名称: Purine nucleoside phosphorylase, SODIUM ION
著者Given, F, Johnston, J, Crittenden, D, Moran, F, Johns, A.
登録日2022-05-31
公開日2022-12-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.72 Å)
主引用文献The structure of His-tagged Geobacillus stearothermophilus purine nucleoside phosphorylase reveals a 'spanner in the works'.
Acta Crystallogr.,Sect.F, 78, 2022
6QDV
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BU of 6qdv by Molmil
Human post-catalytic P complex spliceosome
分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent RNA helicase DHX8, ...
著者Fica, S.M, Oubridge, C, Wilkinson, M.E, Newman, A.J, Nagai, K.
登録日2019-01-03
公開日2019-02-20
最終更新日2024-11-13
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献A human postcatalytic spliceosome structure reveals essential roles of metazoan factors for exon ligation.
Science, 363, 2019
6FF7
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BU of 6ff7 by Molmil
human Bact spliceosome core structure
分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, ADENOSINE-5'-DIPHOSPHATE, BUD13 homolog, ...
著者Haselbach, D, Komarov, I, Agafonov, D, Hartmuth, K, Graf, B, Kastner, B, Luehrmann, R, Stark, H.
登録日2018-01-03
公開日2019-03-13
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (4.5 Å)
主引用文献Structure and Conformational Dynamics of the Human Spliceosomal BactComplex.
Cell, 172, 2018
6ZK1
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BU of 6zk1 by Molmil
Plant nucleoside hydrolase - ZmNRh2b enzyme
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
著者Morera, S, Vigouroux, A, Kopecny, D.
登録日2020-06-29
公開日2022-01-12
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.99 Å)
主引用文献Plant nucleoside N-ribohydrolases: riboside binding and role in nitrogen storage mobilization.
Plant J., 2023
6ZK2
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BU of 6zk2 by Molmil
Plant nucleoside hydrolase - ZmNRh2b in complex with forodesine
分子名称: 1,2-ETHANEDIOL, 1,4-DIDEOXY-4-AZA-1-(S)-(9-DEAZAHYPOXANTHIN-9-YL)-D-RIBITOL, CALCIUM ION, ...
著者Morera, S, Vigouroux, A, Kopecny, D.
登録日2020-06-29
公開日2022-01-12
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Plant nucleoside N-ribohydrolases: riboside binding and role in nitrogen storage mobilization.
Plant J., 2023
6ZK3
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BU of 6zk3 by Molmil
Plant nucleoside hydrolase - ZmNRh2b in complex with ribose
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
著者Morera, S, Vigouroux, A, Kopecny, D.
登録日2020-06-29
公開日2022-01-12
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Plant nucleoside N-ribohydrolases: riboside binding and role in nitrogen storage mobilization.
Plant J., 2023
6ZK4
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BU of 6zk4 by Molmil
Plant nucleoside hydrolase - ZmNRh2b with a bound adenine
分子名称: 1,2-ETHANEDIOL, ADENINE, CALCIUM ION, ...
著者Morera, S, Vigouroux, A, Kopecny, D.
登録日2020-06-29
公開日2022-01-12
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Plant nucleoside N-ribohydrolases: riboside binding and role in nitrogen storage mobilization.
Plant J., 2023
6ZK5
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BU of 6zk5 by Molmil
Plant nucleoside hydrolase - ZmNRh3 enzyme in complex with forodesine
分子名称: 1,2-ETHANEDIOL, 1,4-DIDEOXY-4-AZA-1-(S)-(9-DEAZAHYPOXANTHIN-9-YL)-D-RIBITOL, CALCIUM ION, ...
著者Morera, S, Vigouroux, A, Kopecny, D.
登録日2020-06-29
公開日2022-01-12
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Plant nucleoside N-ribohydrolases: riboside binding and role in nitrogen storage mobilization.
Plant J., 2023
8C25
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BU of 8c25 by Molmil
purine nucleoside phosphorylase in complex with JS-375
分子名称: CHLORIDE ION, GLYCEROL, Purine nucleoside phosphorylase, ...
著者Djukic, S, Pachl, P, Rezacova, P.
登録日2022-12-21
公開日2023-05-31
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Design, Synthesis, Biological Evaluation, and Crystallographic Study of Novel Purine Nucleoside Phosphorylase Inhibitors.
J.Med.Chem., 66, 2023
6XZ2
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BU of 6xz2 by Molmil
Crystal structure of E. Coli purine nucleoside phosphorylase mutant Y160W with SO4 and Formycin A
分子名称: (1S)-1-(7-amino-1H-pyrazolo[4,3-d]pyrimidin-3-yl)-1,4-anhydro-D-ribitol, Purine nucleoside phosphorylase DeoD-type, SULFATE ION
著者Narczyk, M, Bzowska, A.
登録日2020-01-31
公開日2021-02-10
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.65000308 Å)
主引用文献Single tryptophan Y160W mutant of homooligomeric E. coli purine nucleoside phosphorylase implies that dimers forming the hexamer are functionally not equivalent.
Sci Rep, 11, 2021
5Z58
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BU of 5z58 by Molmil
Cryo-EM structure of a human activated spliceosome (early Bact) at 4.9 angstrom.
分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, BUD13 homolog, Cell division cycle 5-like protein, ...
著者Zhang, X, Yan, C, Zhan, X, Li, L, Lei, J, Shi, Y.
登録日2018-01-17
公開日2018-09-19
最終更新日2024-11-06
実験手法ELECTRON MICROSCOPY (4.9 Å)
主引用文献Structure of the human activated spliceosome in three conformational states.
Cell Res., 28, 2018
5YZG
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BU of 5yzg by Molmil
The Cryo-EM Structure of Human Catalytic Step I Spliceosome (C complex) at 4.1 angstrom resolution
分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, ...
著者Zhan, X, Yan, C, Zhang, X, Lei, J, Shi, Y.
登録日2017-12-14
公開日2018-08-08
最終更新日2024-10-23
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Structure of a human catalytic step I spliceosome
Science, 359, 2018
5Z57
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BU of 5z57 by Molmil
Cryo-EM structure of the human activated spliceosome (late Bact) at 6.5 angstrom
分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, ALANINE, BUD13 homolog, ...
著者Zhang, X, Yan, C, Zhan, X, Li, L, Lei, J, Shi, Y.
登録日2018-01-17
公開日2018-09-19
最終更新日2024-10-30
実験手法ELECTRON MICROSCOPY (6.5 Å)
主引用文献Structure of the human activated spliceosome in three conformational states.
Cell Res., 28, 2018
5Z56
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BU of 5z56 by Molmil
cryo-EM structure of a human activated spliceosome (mature Bact) at 5.1 angstrom.
分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, BUD13 homolog, Cell division cycle 5-like protein, ...
著者Zhang, X, Yan, C, Zhan, X, Li, L, Lei, J, Shi, Y.
登録日2018-01-17
公開日2018-09-19
最終更新日2024-11-13
実験手法ELECTRON MICROSCOPY (5.1 Å)
主引用文献Structure of the human activated spliceosome in three conformational states.
Cell Res., 28, 2018
6FF4
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BU of 6ff4 by Molmil
human Bact spliceosome core structure
分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, BUD13 homolog, Cell division cycle 5-like protein, ...
著者Haselbach, D, Komarov, I, Agafonov, D, Hartmuth, K, Graf, B, Kastner, B, Luehrmann, R, Stark, H.
登録日2018-01-03
公開日2018-08-29
最終更新日2025-07-02
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structure and Conformational Dynamics of the Human Spliceosomal BactComplex.
Cell, 172, 2018
9FMD
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BU of 9fmd by Molmil
Integrative model of the human post-catalytic spliceosome (P-complex)
分子名称: 116 kDa U5 small nuclear ribonucleoprotein component, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent RNA helicase DHX8, ...
著者Rothe, P, Plaschka, C, Vorlaender, M.K.
登録日2024-06-05
公開日2024-07-10
最終更新日2024-12-11
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Mechanism for the initiation of spliceosome disassembly.
Nature, 632, 2024
8ZOJ
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BU of 8zoj by Molmil
The crystal structure of YegTK267A from the Nucleoside: H+ Symporter Family
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, Putative nucleoside transporter YegT
著者Xiao, Q.J, Deng, D.
登録日2024-05-28
公開日2025-04-02
最終更新日2025-04-09
実験手法X-RAY DIFFRACTION (2.913 Å)
主引用文献Mechanistic insights into proton-coupled substrate translocation of nucleoside proton symporters.
J.Biol.Chem., 301, 2025

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件を2025-07-16に公開中

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