PDB: 45522 件ウェブページステータス検索Chemie searchBIRD

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3A7F	Human MST3 kinase 分子名称: Serine/threonine kinase 24 (STE20 homolog, yeast) 著者 Ko, T.P, Jeng, W.Y, Liu, C.I, Lai, M.D, Wang, A.H.J. 登録日 2009-09-26 公開日 2010-02-02 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Structures of human MST3 kinase in complex with adenine, ADP and Mn2+. Acta Crystallogr.,Sect.D, 66, 2010
3AGX	Crystal structure of human Hsp40 Hdj1 peptide-binding domain 分子名称: DnaJ homolog subfamily B member 1 著者 Suzuki, H, Noguchi, S, Satow, Y. 登録日 2010-04-12 公開日 2011-02-23 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Peptide-binding sites as revealed by the crystal structures of the human Hsp40 Hdj1 C-terminal domain in complex with the octapeptide from human Hsp70 Biochemistry, 49, 2010
2ZYE	Structure of HIV-1 Protease in Complex with Potent Inhibitor KNI-272 Determined by Neutron Crystallography 分子名称: (4R)-N-tert-butyl-3-[(2S,3S)-2-hydroxy-3-({N-[(isoquinolin-5-yloxy)acetyl]-S-methyl-L-cysteinyl}amino)-4-phenylbutanoyl]-1,3-thiazolidine-4-carboxamide, protease 著者 Adachi, M, Ohhara, T, Tamada, T, Okazaki, N, Kuroki, R. 登録日 2009-01-20 公開日 2009-03-24 最終更新日 2024-05-29 実験手法 NEUTRON DIFFRACTION (1.9 Å) 主引用文献 Structure of HIV-1 protease in complex with potent inhibitor KNI-272 determined by high-resolution X-ray and neutron crystallography. Proc.Natl.Acad.Sci.USA, 2009
3AO2	Fragment-based approach to the design of ligands targeting a novel site on HIV-1 integrase 分子名称: (2S,3S)-1,4-DIMERCAPTOBUTANE-2,3-DIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 3-(7-bromo-1,3-benzodioxol-5-yl)-1-methyl-1H-pyrazol-5-amine, ... 著者 Wielens, J, Chalmers, D.K, Headey, S.J, Parker, M.W, Scanlon, M.J. 登録日 2010-09-20 公開日 2011-03-16 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Fragment-based design of ligands targeting a novel site on the integrase enzyme of human immunodeficiency virus 1 Chemmedchem, 6, 2011
385D	FORMATION OF A NEW COMPOUND IN THE CRYSTAL STRUCTURE OF CYANOMORPHOLINODOXORUBICIN COMPLEXED WITH D(CGATCG) 分子名称: DNA (5'-D(*CP*GP*AP*TP*CP*G)-3'), N-ETHYLHYDROXY-DOXORUBICIN 著者 Ettorre, A, Cirilli, M, Ughetto, G. 登録日 1998-03-05 公開日 1998-10-30 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Degradation of the morpholino ring in the crystal structure of cyanomorpholinodoxorubicin complexed with d(CGATCG). Eur.J.Biochem., 258, 1998
397D	A 1.3 A RESOLUTION CRYSTAL STRUCTURE OF THE HIV-1 TRANS-ACTIVATION RESPONSE REGION RNA STEM REVEALS A METAL ION-DEPENDENT BULGE CONFORMATION 分子名称: CALCIUM ION, RNA (5'-R(*GP*CP*UP*CP*UP*CP*UP*GP*GP*CP*CP*C)-3'), RNA (5'-R(*GP*GP*CP*CP*AP*GP*AP*UP*CP*UP*GP*AP*GP*CP*G)-3') 著者 Ippolito, J.A, Steitz, T.A. 登録日 1998-04-30 公開日 1998-09-11 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 A 1.3-A resolution crystal structure of the HIV-1 trans-activation response region RNA stem reveals a metal ion-dependent bulge conformation. Proc.Natl.Acad.Sci.USA, 95, 1998
362D	THE STRUCTURE OF D(TGCGCA)2 AND A COMPARISON TO OTHER Z-DNA HEXAMERS 分子名称: COBALT HEXAMMINE(III), DNA (5'-D(*TP*GP*CP*GP*CP*A)-3') 著者 Harper, N.A, Brannigan, J.A, Buck, M, Lewis, R.J, Moore, M.H, Schneider, B. 登録日 1997-08-20 公開日 1997-11-20 最終更新日 2023-08-02 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Structure of d(TGCGCA)2 and a comparison to other DNA hexamers. Acta Crystallogr.,Sect.D, 54, 1998
3AAP	Crystal Structure of Lp1NTPDase from Legionella pneumophila 分子名称: Ectonucleoside triphosphate diphosphohydrolase I 著者 Vivian, J.P, Beddoe, T, Rossjohn, J. 登録日 2009-11-24 公開日 2010-02-09 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Crystal Structure of a Legionella pneumophila Ecto -Triphosphate Diphosphohydrolase, A Structural and Functional Homolog of the Eukaryotic NTPDases Structure, 18, 2010
3AEX	Catalytic intermediate analogue of threonine synthase from Thermus thermophilus HB8 分子名称: (3E)-4-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}-2-oxobut-3-enoic acid, PHOSPHATE ION, Threonine synthase 著者 Murakawa, T, Machida, Y, Hayashi, H. 登録日 2010-02-13 公開日 2010-11-17 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Product-assisted catalysis as the basis of the reaction specificity of threonine synthase. J.Biol.Chem., 286, 2011
3BQR	Crystal structure of human death associated protein kinase 3 (DAPK3) in complex with an imidazo-pyridazine ligand 分子名称: 4-(6-{[(1R)-1-(hydroxymethyl)propyl]amino}imidazo[1,2-b]pyridazin-3-yl)benzoic acid, Death-associated protein kinase 3, GLYCEROL, ... 著者 Filippakopoulos, P, Rellos, P, Fedorov, O, Niesen, F, Pike, A.C.W, Pilka, E.S, von Delft, F, Arrowsmith, C.H, Edwards, A.M, Weigelt, J, Knapp, S, Structural Genomics Consortium (SGC) 登録日 2007-12-20 公開日 2008-02-26 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Crystal Structure of Human Death Associated Protein Kinase 3 (DAPK3) in Complex with an Imidazo-Pyridazine Ligand. To be Published
3C4J	ABC protein ArtP in complex with ATP-gamma-S 分子名称: Amino acid ABC transporter (ArtP), MAGNESIUM ION, PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER 著者 Thaben, P.F, Eckey, V, Scheffel, F, Saenger, W, Schneider, E, Vahedi-Faridi, A. 登録日 2008-01-30 公開日 2009-02-03 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.33 Å) 主引用文献 Crystal Structures of the ATP-binding cassette (ABC) Protein ArtP from Geobacillus stearothermophilus in complexes with nucleotides and nucleotide analogs reveal an intermediate semiclosed dimer in the post hydrolyses state and an asymmetry in the dimerisation region To be Published
3C70	HNL from Hevea brasiliensis to atomic resolution 分子名称: Hydroxynitrilase, SULFATE ION, THIOCYANATE ION 著者 Schmidt, A. 登録日 2008-02-06 公開日 2008-06-03 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.05 Å) 主引用文献 Atomic resolution crystal structures and quantum chemistry meet to reveal subtleties of hydroxynitrile lyase catalysis J.Biol.Chem., 283, 2008
3C7Y	Mutant R96A OF T4 lysozyme in wildtype background at 298K 分子名称: BETA-MERCAPTOETHANOL, CHLORIDE ION, lysozyme 著者 Mooers, B.H.M. 登録日 2008-02-08 公開日 2009-02-17 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Contributions of all 20 amino acids at site 96 to the stability and structure of T4 lysozyme. Protein Sci., 18, 2009
3C3R	ALIX BRO1 CHMP4C complex 分子名称: Charged multivesicular body protein 4c peptide, GLYCEROL, Programmed cell death 6-interacting protein 著者 McCullough, J.B, Fisher, R.D, Whitby, F.G, Sundquist, W.I, Hill, C.P. 登録日 2008-01-28 公開日 2008-06-10 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.02 Å) 主引用文献 ALIX-CHMP4 interactions in the human ESCRT pathway. Proc.Natl.Acad.Sci.Usa, 105, 2008
3C82	Bacteriophage lysozyme T4 lysozyme mutant K85A/R96H 分子名称: BETA-MERCAPTOETHANOL, CHLORIDE ION, Lysozyme 著者 Mooers, B.H.M. 登録日 2008-02-08 公開日 2009-02-17 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.68 Å) 主引用文献 Contributions of all 20 amino acids at site 96 to the stability and structure of T4 lysozyme. Protein Sci., 18, 2009
3BUS	Crystal Structure of RebM 分子名称: Methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE 著者 McCoy, J.G, Singh, S, Bingman, C.A, Thorson, J.S, Phillips Jr, G.N. 登録日 2008-01-03 公開日 2008-03-25 最終更新日 2017-10-25 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Structure and mechanism of the rebeccamycin sugar 4'-O-methyltransferase RebM. J.Biol.Chem., 283, 2008
3BX8	Engineered Human Lipocalin 2 (LCN2), apo-form 分子名称: 3,6,9,12,15,18,21,24-OCTAOXAHEXACOSAN-1-OL, ENGINEERED HUMAN LIPOCALIN 2, PENTAETHYLENE GLYCOL 著者 Schonfeld, D.L, Chatwell, L, Skerra, A. 登録日 2008-01-11 公開日 2009-01-20 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 High affinity molecular recognition and functional blockade of CTLA-4 by an engineered human lipocalin To be Published
3BWT	Crystal structure of the RNA binding domain of Puf4 from Saccharomyces cerevisiae 分子名称: Protein PUF4 著者 Miller, M.T, Higgin, J.J, Hall, T.M.T. 登録日 2008-01-10 公開日 2008-03-11 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.69 Å) 主引用文献 Basis of altered RNA-binding specificity by PUF proteins revealed by crystal structures of yeast Puf4p Nat.Struct.Mol.Biol., 15, 2008
2ZUU	Crystal structure of Galacto-N-biose/Lacto-N-biose I phosphorylase in complex with GlcNAc 分子名称: 2-acetamido-2-deoxy-alpha-D-glucopyranose, GLYCEROL, Lacto-N-biose phosphorylase, ... 著者 Hidaka, M, Nishimoto, M, Kitaoka, M, Wakagi, T, Shoun, H, Fushinobu, S. 登録日 2008-10-28 公開日 2008-12-30 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 The crystal structure of galacto-N-biose/lacto-N-biose I phosphorylase: A large deformation of a tim barrel scaffold J.Biol.Chem., 284, 2009
2Z45	Crystal Structure of Zn-bound ORF134 分子名称: ORF134, ZINC ION 著者 Tomimoto, Y, Ihara, K, Onizuka, T, Kanai, S, Ashida, H, Yokota, A, Tanaka, S, Miyasaka, H, Yamada, Y, Kato, R, Wakatsuki, S. 登録日 2007-06-12 公開日 2008-06-24 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Crystal Structure of ORF134 To be Published
2Z3F	Crystal structure of spCia1/Asf1 complexed with Cac2 peptide 分子名称: Histone chaperone cia1, SPAC26H5.03 protein 著者 Malay, A.D, Padmanabhan, B, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2007-06-04 公開日 2008-03-11 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Crystal Structures of Fission Yeast Histone Chaperone Asf1 Complexed with the Hip1 B-domain or the Cac2 C Terminus J.Biol.Chem., 283, 2008
2ZIR	Crystal Structure of rat protein farnesyltransferase complexed with a benzofuran inhibitor and FPP 分子名称: 2-[(S)-(4-chlorophenyl)(hydroxy)(1-methyl-1H-imidazol-5-yl)methyl]-N-morpholin-4-yl-7-phenyl-1-benzofuran-5-carboxamide, FARNESYL DIPHOSPHATE, GLYCEROL, ... 著者 Fukami, T.A, Sogabe, S, Nagata, Y, Kondoh, O, Ishii, N. 登録日 2008-02-22 公開日 2009-02-24 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Synthesis and structure-activity relationships of novel benzofuran farnesyltransferase inhibitors Bioorg.Med.Chem.Lett., 19, 2009
2Z4S	Crystal structure of domain III from the Thermotoga maritima replication initiation protein DnaA 分子名称: ADENOSINE-5'-DIPHOSPHATE, Chromosomal replication initiator protein dnaA, MAGNESIUM ION 著者 Fujikawa, N, Ozaki, S, Kagawa, W, Park, S.-Y, Katayama, T, Kurumizaka, H, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2007-06-25 公開日 2008-02-19 最終更新日 2024-08-14 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 A Common Mechanism for the ATP-DnaA-dependent Formation of Open Complexes at the Replication Origin. J.Biol.Chem., 283, 2008
2Z55	Bacterioruberin in the trimeric structure of archaerhodopsin-2 分子名称: 2,3-DI-PHYTANYL-GLYCEROL, Archaerhodopsin-2, BACTERIORUBERIN, ... 著者 Kouyama, T, Yoshimura, K. 登録日 2007-06-28 公開日 2008-01-01 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural role of bacterioruberin in the trimeric structure of archaerhodopsin-2 J.Mol.Biol., 375, 2008
2ZJS	Crystal Structure of SecYE translocon from Thermus thermophilus with a Fab fragment 分子名称: Fab56 (heavy chain), Fab56 (light chain), Preprotein translocase SecE subunit, ... 著者 Tsukazaki, T, Mori, H, Fukai, S, Ishitani, R, Perederina, A, Vassylyev, D.G, Ito, K, Nureki, O. 登録日 2008-03-08 公開日 2008-10-14 最終更新日 2021-11-10 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Conformational transition of Sec machinery inferred from bacterial SecYE structures Nature, 455, 2008

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