PDB: 222415 件ウェブページステータス検索Chemie searchBIRD

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1M5R	Ternary complex of T4 phage BGT with UDP and a 13 mer DNA duplex 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5'-D(*CP*TP*AP*TP*CP*TP*GP*AP*GP*TP*AP*TP*C)-3', ... 著者 Lariviere, L, Morera, S. 登録日 2002-07-10 公開日 2002-12-11 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 A Base-flipping mechanism for the T4 phage beta-glucosyltransferase and identification of a transition state analog J.Mol.Biol., 324, 2002
6Q90	Structure of human galactokinase 1 bound with 1-(4-Methoxyphenyl)-3-(4-pyridinyl)urea 分子名称: 2-(1,3-benzoxazol-2-ylamino)spiro[1,6,7,8-tetrahydroquinazoline-4,1'-cyclohexane]-5-one, Galactokinase, N-(4-methoxyphenyl)-N'-pyridin-4-ylurea, ... 著者 Mackinnon, S.R, Bezerra, G.A, Zhang, M, Foster, W, Krojer, T, Brandao-Neto, J, Douangamath, A, Arrowsmith, C, Edwards, A, Bountra, C, Brennan, P, Lai, K, Yue, W.W. 登録日 2018-12-16 公開日 2019-01-23 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structure of human galactokinase 1 bound with 1-(4-Methoxyphenyl)-3-(4-pyridinyl)urea To Be Published
9B5L	Ubiquitin E1-Ub-E2 tetrahedral transthiolation intermediate mimic (doubly Ub-loaded) - Ub(T) class 10 map and model from cluster 5 (Ub(A)-AMP) 分子名称: 4-aminobutanenitrile, ADENOSINE MONOPHOSPHATE, Polyubiquitin, ... 著者 Kochanczyk, T, Lima, C.D. 登録日 2024-03-22 公開日 2024-06-05 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Structural basis for transthiolation intermediates in the ubiquitin pathway To be published
9B5H	Ubiquitin E1-Ub-E2 tetrahedral transthiolation intermediate mimic (doubly Ub-loaded) - cluster 3 map and model (Ub(A)-AMP/PPi/Mg) 分子名称: 4-aminobutanenitrile, ADENOSINE MONOPHOSPHATE, Large ribosomal subunit protein eL40B, ... 著者 Kochanczyk, T, Lima, C.D. 登録日 2024-03-22 公開日 2024-06-05 実験手法 ELECTRON MICROSCOPY (2.69 Å) 主引用文献 Structural basis for transthiolation intermediates in the ubiquitin pathway To be published
9BQV	DdmD dimer apoprotein 分子名称: Helicase/UvrB N-terminal domain-containing protein 著者 Bravo, J.P.K, Taylor, D.W. 登録日 2024-05-10 公開日 2024-07-03 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Plasmid targeting and destruction by the DdmDE bacterial defence system. Nature, 630, 2024
9BD3	Structure of the MAGEA4 MHD-RAD18 R6BD Complex 分子名称: E3 ubiquitin-protein ligase RAD18, Melanoma antigen A 4 著者 Forker, K, Zhou, P. 登録日 2024-04-10 公開日 2024-06-05 最終更新日 2024-07-03 実験手法 X-RAY DIFFRACTION (2.58 Å) 主引用文献 Crystal structure of MAGEA4 MHD-RAD18 R6BD reveals a flipped binding mode compared to AlphaFold2 prediction. Embo J., 2024
2FN7	Crystal structure of the lactate dehydrogenase from cryptosporidium parvum complexed with substrate (lactic acid) and cofactor (b-nicotinamide adenine dinucleotide) 分子名称: GLYCEROL, LACTIC ACID, Lactate Dehydrogenase, ... 著者 Senkovich, O.A, Chattopadhyay, D. 登録日 2006-01-10 公開日 2007-01-23 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structure of cryptosporidium parvum lactate dehydrogenase in complex with substrates and cofactors To be Published
2G3J	Structure of S.olivaceoviridis xylanase Q88A/R275A mutant 分子名称: PHOSPHATE ION, Xylanase, alpha-D-xylopyranose-(1-4)-alpha-D-xylopyranose 著者 Diertavitian, S, Kaneko, S, Fujimoto, Z, Kuno, A, Johansson, E, Lo Leggio, L. 登録日 2006-02-20 公開日 2007-03-06 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structure-based engineering of glucose specificity in a family 10 xylanase from Streptomyces olivaceoviridis E-86 PROCESS BIOCHEM, 47, 2012
9F9K	Crystal structure of MUS81-EME1 bound by compound 15. 分子名称: 5-oxidanyl-6-oxidanylidene-2-(4-phenylphenyl)-1H-pyrimidine-4-carboxylic acid, Crossover junction endonuclease EME1, Crossover junction endonuclease MUS81, ... 著者 Collie, G.W. 登録日 2024-05-07 公開日 2024-07-03 実験手法 X-RAY DIFFRACTION (2.728 Å) 主引用文献 Fragment-Based Discovery of Novel MUS81 Inhibitors Acs Med.Chem.Lett., 2024
8YTX	Tubulin-RB3-TTL in complex with compound SI9 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-chloranyl-~{N}-(4-methoxyphenyl)-~{N}-methyl-thieno[2,3-d]pyrimidin-4-amine, CALCIUM ION, ... 著者 Wu, C.Y, Wang, Y.X. 登録日 2024-03-26 公開日 2024-06-05 実験手法 X-RAY DIFFRACTION (2.53 Å) 主引用文献 Tubulin-RB3-TTL in complex with compound SI9 To Be Published
9BKF	Crystal structure of selenomethionine labeled bovine trypsin mutant - S195A solved by Sulphur-SAD at 1A wavelength 分子名称: Serine protease 1 著者 Zhou, D, Chen, L, Rose, J.P, Wang, B.C. 登録日 2024-04-27 公開日 2024-06-05 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 Crystal structure of selenomethionine labeled bovine trypsin mutant - S195A solved by Sulphur-SAD at 1A wavelength To Be Published
3UE9	Crystal structure of Adenylosuccinate synthetase (AMPSase) (purA) from Burkholderia thailandensis 分子名称: ACETATE ION, Adenylosuccinate synthetase, CALCIUM ION, ... 著者 Seattle Structural Genomics Center for Infectious Disease (SSGCID) 登録日 2011-10-28 公開日 2011-11-16 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Combining functional and structural genomics to sample the essential Burkholderia structome. Plos One, 8, 2013
9B5F	Ubiquitin E1-Ub-E2 tetrahedral transthiolation intermediate mimic (doubly Ub-loaded) - cluster 1 map and model (Ub(A)/ATP/Mg) 分子名称: 4-aminobutanenitrile, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... 著者 Kochanczyk, T, Lima, C.D. 登録日 2024-03-22 公開日 2024-06-05 実験手法 ELECTRON MICROSCOPY (2.78 Å) 主引用文献 Structural basis for transthiolation intermediates in the ubiquitin pathway To be published
8Y7R	Crystal structure of a novel ketoreductase from Sphingobacterium siyangense SY1 分子名称: NAD(P)-dependent dehydrogenase (Short-subunit alcohol dehydrogenase family) 著者 Zheng, Z.R, Wei, H.L, Liu, W.D, You, S. 登録日 2024-02-05 公開日 2024-06-12 実験手法 X-RAY DIFFRACTION (1.62 Å) 主引用文献 Crystal structure of a novel ketoreductase from Sphingobacterium siyangense SY1 To Be Published
2FO5	Crystal structure of recombinant barley cysteine endoprotease B isoform 2 (EP-B2) in complex with leupeptin 分子名称: ACE-LEU-LEU-argininal (leupeptin), Cysteine proteinase EP-B 2, SULFATE ION 著者 Bethune, M.T, Strop, P, Brunger, A.T, Khosla, C. 登録日 2006-01-12 公開日 2006-07-18 最終更新日 2017-10-18 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Heterologous Expression, Purification, Refolding, and Structural-Functional Characterization of EP-B2, a Self-Activating Barley Cysteine Endoprotease. Chem.Biol., 13, 2006
1MJM	METHIONINE APOREPRESSOR MUTANT (Q44K) COMPLEXED TO HALF OF THE CONSENSUS OPERATOR SEQUENCE 分子名称: HALF CONSENSUS DNA OPERATOR DUPLEX, METHIONINE REPRESSOR 著者 Garvie, C.W, Phillips, S.E.V. 登録日 1998-01-30 公開日 1999-08-02 最終更新日 2023-08-02 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Direct and indirect readout in mutant Met repressor-operator complexes. Structure Fold.Des., 8, 2000
9B5I	Ubiquitin E1-Ub-E2 tetrahedral transthiolation intermediate mimic (doubly Ub-loaded) - cluster 4 map and model (Ub(A)-AMP/PPi/Mg) 分子名称: 4-aminobutanenitrile, ADENOSINE MONOPHOSPHATE, MAGNESIUM ION, ... 著者 Kochanczyk, T, Lima, C.D. 登録日 2024-03-22 公開日 2024-06-05 実験手法 ELECTRON MICROSCOPY (2.7 Å) 主引用文献 Structural basis for transthiolation intermediates in the ubiquitin pathway To be published
9EMB	Structure of KefC Asp156Asn variant 分子名称: (1R)-2-{[(S)-{[(2S)-2,3-dihydroxypropyl]oxy}(hydroxy)phosphoryl]oxy}-1-[(hexadecanoyloxy)methyl]ethyl (9Z)-octadec-9-enoate, ADENOSINE MONOPHOSPHATE, Glutathione-regulated potassium-efflux system protein KefC 著者 Gulati, A, Kokane, S, Drew, D. 登録日 2024-03-07 公開日 2024-06-05 実験手法 ELECTRON MICROSCOPY (2.98 Å) 主引用文献 Structure of KefC Asp156Asn variant To Be Published
9EU7	The FK1 domain of FKBP51 in complex with SAFit-analog 15b 分子名称: (2-methyl-1,3-thiazol-5-yl)methyl (2S)-1-[(2S)-2-cyclohexyl-2-(3,4,5-trimethoxyphenyl)ethanoyl]piperidine-2-carboxylate, Peptidyl-prolyl cis-trans isomerase FKBP5 著者 Meyners, C, Buffa, V, Hausch, F. 登録日 2024-03-27 公開日 2024-06-12 実験手法 X-RAY DIFFRACTION (2.21 Å) 主引用文献 1,4-Pyrazolyl-containing SAFit-analogues are selective FKBP51 inhibitors with improved ligand efficiency and drug-like profile. Chemmedchem, 2024
9BKL	Cobalt substituted rubredoxin from Pyrococcus furiosus solved by Co/S-SAD 分子名称: COBALT (II) ION, Rubredoxin 著者 Zhou, D, Chen, L, Rose, J.P, Wang, B.C. 登録日 2024-04-29 公開日 2024-06-05 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Cobalt substituted rubredoxin from Pyrococcus furiosus solved by Co/S-SAD To Be Published
8Y2H	GK tetramer of AtP5CS1 filament with adjacent hooks, reaction state 分子名称: ADENOSINE-5'-TRIPHOSPHATE, Delta-1-pyrroline-5-carboxylate synthase A 著者 Zhang, T, Guo, C.J, Liu, J.L. 登録日 2024-01-26 公開日 2024-06-05 最終更新日 2024-07-10 実験手法 ELECTRON MICROSCOPY (3.3 Å) 主引用文献 Dynamic Arabidopsis P5CS filament facilitates substrate channelling. Nat.Plants, 10, 2024
8ZMU	GLUTAMATE DEHYDROGENASE (W89F-MUTANT) FROM THERMOCOCCUS PROFUNDUS IN THE UNLIGANDED STATE 分子名称: ACETIC ACID, GLYCEROL, Glutamate dehydrogenase, ... 著者 Wakabayashi, T, Matsui, Y, Masayoshi, M. 登録日 2024-05-23 公開日 2024-06-05 実験手法 X-RAY DIFFRACTION (2.028 Å) 主引用文献 Mechanism for drastic reduction in catalytic activity of Trp89Phe-mutated glutamate dehydrogenase revealed by cryoEM-sampling metastable conformation in action To Be Published
9BBE	Co-crystal structure of human DDB1 bound to fragment UB028668 分子名称: 5-(4-methoxyphenyl)-3-[(3S)-pyrrolidin-3-yl]-1,2,4-oxadiazole, DNA damage-binding protein 1, L(+)-TARTARIC ACID, ... 著者 Zeng, H, Dong, A, Frommlet, A, Seitova, A, Loppnau, P, Ackloo, S, Arrowsmith, C.H, Edwards, A.M, Halabelian, L, Structural Genomics Consortium (SGC) 登録日 2024-04-05 公開日 2024-06-12 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Co-crystal structure of human DDB1 bound to fragment UB028668 To be published
2FR5	Crystal Structure of Mouse Cytidine Deaminase Complexed with Tetrahydrouridine 分子名称: Cytidine deaminase, SULFATE ION, TETRAHYDROURIDINE, ... 著者 Teh, A.H. 登録日 2006-01-19 公開日 2006-07-11 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.48 Å) 主引用文献 The 1.48 A Resolution Crystal Structure of the Homotetrameric Cytidine Deaminase from Mouse Biochemistry, 45, 2006
8ZAH	Crystal structure of the channel protein CorA from Campylobacter jejuni 分子名称: Magnesium transport protein CorA, SULFATE ION 著者 Ahn, S.Y, Yoon, S.I. 登録日 2024-04-25 公開日 2024-06-19 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structural and biochemical analysis of the unique interactions of the Campylobacter jejuni CorA channel protein with divalent cations. Biochem.Biophys.Res.Commun., 723, 2024

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