PDB: 45118 件ウェブページステータス検索Chemie searchBIRD

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6CO7	Structure of the nvTRPM2 channel in complex with Ca2+ 分子名称: (2S)-3-(hexadecanoyloxy)-2-[(9Z)-octadec-9-enoyloxy]propyl 2-(trimethylammonio)ethyl phosphate, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... 著者 Zhang, Z, Toth, B, Szollosi, A, Chen, J, Csanady, L. 登録日 2018-03-12 公開日 2018-05-16 最終更新日 2020-07-29 実験手法 ELECTRON MICROSCOPY (3.07 Å) 主引用文献 Structure of a TRPM2 channel in complex with Ca2+explains unique gating regulation. Elife, 7, 2018
5ZP6	Copper amine oxidase from Arthrobacter globiformis anaerobically reduced by ethylamine at pH 6 at 277 K (2) 分子名称: 1,2-ETHANEDIOL, COPPER (II) ION, Phenylethylamine oxidase, ... 著者 Murakawa, T, Baba, S, Kawano, Y, Hayashi, H, Yano, T, Tanizawa, K, Kumasaka, T, Yamamoto, M, Okajima, T. 登録日 2018-04-16 公開日 2018-12-19 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.688 Å) 主引用文献 In crystallothermodynamic analysis of conformational change of the topaquinone cofactor in bacterial copper amine oxidase. Proc. Natl. Acad. Sci. U.S.A., 116, 2019
4NDS	Crystal structure of L. decastes alpha-galactosyl-binding lectin 分子名称: Alpha-galactosyl-binding lectin, SODIUM ION 著者 Van Eerde, A, Grahn, E, Krengel, U. 登録日 2013-10-27 公開日 2014-12-10 最終更新日 2017-09-20 実験手法 X-RAY DIFFRACTION (0.997 Å) 主引用文献 Atomic-resolution structure of the alpha-galactosyl binding Lyophyllum decastes lectin reveals a new protein family found in both fungi and plants. Glycobiology, 25, 2015
1ZFA	GGA Duplex A-DNA 分子名称: 5'-D(*CP*CP*TP*CP*CP*GP*GP*AP*GP*G)-3', CALCIUM ION, SODIUM ION 著者 Hays, F.A, Teegarden, A.T, Jones, Z.J.R, Harms, M, Raup, D, Watson, J, Cavaliere, E, Ho, P.S. 登録日 2005-04-20 公開日 2005-05-10 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (1.56 Å) 主引用文献 How sequence defines structure: a crystallographic map of DNA structure and conformation. Proc.Natl.Acad.Sci.Usa, 102, 2005
4NJH	Crystal Structure of QueE from Burkholderia multivorans in complex with AdoMet and 6-carboxy-5,6,7,8-tetrahydropterin 分子名称: (6R)-2-amino-4-oxo-3,4,5,6,7,8-hexahydropteridine-6-carboxylic acid, 7-carboxy-7-deazaguanine synthase, IRON/SULFUR CLUSTER, ... 著者 Dowling, D.P, Bruender, N.A, Young, A.P, McCarty, R.M, Bandarian, V, Drennan, C.L. 登録日 2013-11-10 公開日 2013-12-25 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.898 Å) 主引用文献 Radical SAM enzyme QueE defines a new minimal core fold and metal-dependent mechanism. Nat.Chem.Biol., 10, 2014
6CPQ	Structure of human DNA polymerase beta complexed with 8-ClG in the template base paired with incoming non-hydrolyzable CTP 分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]cytidine, DNA (5'-D(*CP*CP*GP*AP*CP*(CGM)P*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*A)-3'), ... 著者 Koag, M.-C, Lee, S. 登録日 2018-03-13 公開日 2019-03-20 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.93 Å) 主引用文献 Structure of human DNA polymerase beta complexed with 8-ClG in the template base paired with incoming non-hydrolyzable CTP To Be Published
1XN1	Crystal Structure Of Lumazine Synthase From Brucella Abortus (Orthorhombic Form At 3.05 Angstroms) 分子名称: 6,7-dimethyl-8-ribityllumazine synthase, PHOSPHATE ION, SODIUM ION, ... 著者 Klinke, S, Zylberman, V, Vega, D.R, Guimaraes, B.G, Braden, B.C, Goldbaum, F.A. 登録日 2004-10-04 公開日 2005-09-27 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (3.05 Å) 主引用文献 Crystallographic studies on Decameric Brucella spp. Lumazine Synthase: A Novel Quaternary Arrangement Evolved for a New Function? J.Mol.Biol., 353, 2005
6D2S	Mycobacterium tuberculosis transcriptional regulator 分子名称: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ... 著者 Tang, S, Sacchettini, J. 登録日 2018-04-13 公開日 2019-04-17 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.819 Å) 主引用文献 Structural and functional insight into the Mycobacterium tuberculosis protein PrpR reveals a novel type of transcription factor. Nucleic Acids Res., 47, 2019
5XC0	Crystal structure of an aromatic mutant (W6A) of an alkali thermostable GH10 Xylanase from Bacillus sp. NG-27 分子名称: Beta-xylanase, MAGNESIUM ION, SODIUM ION 著者 Bansia, H, Mahanta, P, Ramakumar, S. 登録日 2017-03-21 公開日 2018-03-28 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.32 Å) 主引用文献 Small Glycols Discover Cryptic Pockets on Proteins for Fragment-Based Approaches. J.Chem.Inf.Model., 2021
6CUB	Structure of human DNA polymerase beta complexed with 8-ClG in the template base paired with incoming non-hydrolyzable ATP and MANGANESE 分子名称: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, DNA (5'-D(*CP*CP*GP*AP*CP*(CGM)P*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*A)-3'), ... 著者 Koag, M.-C, Lee, S. 登録日 2018-03-25 公開日 2019-03-27 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Structure of human DNA polymerase beta complexed with 8-ClG in the template base paired with incoming non-hydrolyzable ATP and MANGANESE To Be Published
5ZC7	Crystal structure of APRT from Y. pseudotuberculosis with bound adenine (P63 space group). 分子名称: ACETATE ION, ADENINE, Adenine phosphoribosyltransferase, ... 著者 Pavithra, G.C, Ramagopal, U.A. 登録日 2018-02-15 公開日 2019-02-20 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal structure of adenine phosphoribosyltransferase from Yersinia pseudotuberculosis To be published
5ZNQ	Crystal structure of APRT from Y. pseudotuberculosis with bound adenine (P21 space group). 分子名称: ADENINE, Adenine phosphoribosyltransferase, CHLORIDE ION, ... 著者 Pavithra, G.C, Ramagopal, U.A. 登録日 2018-04-10 公開日 2019-04-17 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Crystal structure of APRT from Y. pseudotuberculosis with bound adenine (P21 space group). To be published
5ZO9	Eg5 motor domain in complex with STLC-type inhibitor PVEI0021 (C2 type) 分子名称: (2R)-2-azanyl-3-[(4-methoxyphenyl)-diphenyl-methyl]sulfanyl-propanoic acid, ADENOSINE-5'-DIPHOSPHATE, Kinesin-like protein KIF11, ... 著者 Yokoyama, H, Sato, K. 登録日 2018-04-12 公開日 2018-10-10 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Structural and Thermodynamic Basis of the Enhanced Interaction between Kinesin Spindle Protein Eg5 and STLC-type Inhibitors. Acs Omega, 3, 2018
5ZPB	Copper amine oxidase from Arthrobacter globiformis anaerobically reduced by ethylamine at pH 6 at 283 K (3) 分子名称: 1,2-ETHANEDIOL, COPPER (II) ION, Phenylethylamine oxidase, ... 著者 Murakawa, T, Baba, S, Kawano, Y, Hayashi, H, Yano, T, Tanizawa, K, Kumasaka, T, Yamamoto, M, Okajima, T. 登録日 2018-04-16 公開日 2018-12-19 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.793 Å) 主引用文献 In crystallothermodynamic analysis of conformational change of the topaquinone cofactor in bacterial copper amine oxidase Proc. Natl. Acad. Sci. U.S.A., 116, 2019
6CZZ	Crystal structure of Arabidopsis thaliana phosphoserine aminotransferase isoform 1 (AtPSAT1) in complex with PLP-phosphoserine geminal diamine intermediate 分子名称: PHOSPHOSERINE, PYRIDOXAL-5'-PHOSPHATE, Phosphoserine aminotransferase 1, ... 著者 Sekula, B, Ruszkowski, M, Dauter, Z. 登録日 2018-04-09 公開日 2018-05-23 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structural Analysis of Phosphoserine Aminotransferase (Isoform 1) FromArabidopsis thaliana- the Enzyme Involved in the Phosphorylated Pathway of Serine Biosynthesis. Front Plant Sci, 9, 2018
4NHD	Crystal structure of beta-ketoacyl-ACP synthase III (FabH) from Vibrio Cholerae in complex with Coenzyme A 分子名称: 3-oxoacyl-[acyl-carrier-protein] synthase 3 protein 1, CALCIUM ION, COENZYME A, ... 著者 Hou, J, Zheng, H, Langner, K, Anderson, W.F, Minor, W, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2013-11-04 公開日 2013-12-25 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.78 Å) 主引用文献 Crystal structure of beta-ketoacyl-ACP synthase III (FabH) from Vibrio Cholerae in complex with Coenzyme A To be Published
5ZO8	Eg5 motor domain in complex with STLC-type inhibitor PVEI0021 (P21 type) 分子名称: (2R)-2-azanyl-3-[(4-methoxyphenyl)-diphenyl-methyl]sulfanyl-propanoic acid, ADENOSINE-5'-DIPHOSPHATE, Kinesin-like protein KIF11, ... 著者 Yokoyama, H, Sato, K. 登録日 2018-04-12 公開日 2018-10-10 最終更新日 2024-03-27 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structural and Thermodynamic Basis of the Enhanced Interaction between Kinesin Spindle Protein Eg5 and STLC-type Inhibitors. Acs Omega, 3, 2018
5YYD	DNA polymerase IV - ternary complex 15 分子名称: 5'-O-[hydroxy{[hydroxy(phosphonoamino)phosphoryl]oxy}phosphoryl]thymidine, DNA polymerase IV, DTN2, ... 著者 Kottur, J, Nair, D.T. 登録日 2017-12-08 公開日 2018-09-05 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Pyrophosphate hydrolysis is an intrinsic and critical step of the DNA synthesis reaction Nucleic Acids Res., 46, 2018
1IVC	STRUCTURES OF AROMATIC INHIBITORS OF INFLUENZA VIRUS NEURAMINIDASE 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(ACETYLAMINO)-5-AMINO-3-HYDROXYBENZOIC ACID, CALCIUM ION, ... 著者 Jedrzejas, M.J, Luo, M. 登録日 1994-12-12 公開日 1995-03-31 最終更新日 2020-07-29 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Structures of aromatic inhibitors of influenza virus neuraminidase. Biochemistry, 34, 1995
5ZP7	Copper amine oxidase from Arthrobacter globiformis anaerobically reduced by ethylamine at pH 6 at 277 K (3) 分子名称: 1,2-ETHANEDIOL, COPPER (II) ION, Phenylethylamine oxidase, ... 著者 Murakawa, T, Baba, S, Kawano, Y, Hayashi, H, Yano, T, Tanizawa, K, Kumasaka, T, Yamamoto, M, Okajima, T. 登録日 2018-04-16 公開日 2018-12-19 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.631 Å) 主引用文献 In crystallothermodynamic analysis of conformational change of the topaquinone cofactor in bacterial copper amine oxidase. Proc. Natl. Acad. Sci. U.S.A., 116, 2019
4KLM	DNA polymerase beta matched product complex with Mg2+, 11 h 分子名称: 5'-D(*CP*CP*GP*AP*CP*GP*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3', 5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*CP*C)-3', 5'-D(P*GP*TP*CP*GP*G)-3', ... 著者 Freudenthal, B.D, Beard, W.A, Shock, D.D, Wilson, S.H. 登録日 2013-05-07 公開日 2013-07-17 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.747 Å) 主引用文献 Observing a DNA polymerase choose right from wrong. Cell(Cambridge,Mass.), 154, 2013
4KKX	Crystal structure of Tryptophan Synthase from Salmonella typhimurium with 2-aminophenol quinonoid in the beta site and the F6 inhibitor in the alpha site 分子名称: 1,2-ETHANEDIOL, 2-{[4-(TRIFLUOROMETHOXY)BENZOYL]AMINO}ETHYL DIHYDROGEN PHOSPHATE, DI(HYDROXYETHYL)ETHER, ... 著者 Hilario, E, Niks, D, Dunn, M.F, Mueller, L.J, Fan, L. 登録日 2013-05-06 公開日 2014-01-01 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.77 Å) 主引用文献 Allostery and substrate channeling in the tryptophan synthase bienzyme complex: evidence for two subunit conformations and four quaternary states. Biochemistry, 52, 2013
4KNK	Crystal structure of Staphylococcus aureus hydrolase AmiA 分子名称: 1,2-ETHANEDIOL, Bifunctional autolysin, DI(HYDROXYETHYL)ETHER, ... 著者 Buettner, F.M, Zoll, S, Stehle, T. 登録日 2013-05-10 公開日 2014-03-12 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.124 Å) 主引用文献 Structure-function analysis of Staphylococcus aureus amidase reveals the determinants of peptidoglycan recognition and cleavage. J.Biol.Chem., 289, 2014
4NCZ	Spermidine N-acetyltransferase from Vibrio cholerae in complex with 2-[n-cyclohexylamino]ethane sulfonate. 分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, CALCIUM ION, SODIUM ION, ... 著者 Osipiuk, J, Zhou, M, Gu, M, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2013-10-25 公開日 2013-11-06 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (1.89 Å) 主引用文献 A Novel Polyamine Allosteric Site of SpeG from Vibrio cholerae Is Revealed by Its Dodecameric Structure. J.Mol.Biol., 427, 2015
4MTM	Crystal structure of the tail fiber gp53 from Acinetobacter baumannii bacteriophage AP22 分子名称: 1,2-ETHANEDIOL, BROMIDE ION, GLYCEROL, ... 著者 Sycheva, L.V, Shneider, M.M, Leiman, P.G. 登録日 2013-09-19 公開日 2014-10-01 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.368 Å) 主引用文献 Crystal Structure of the putative tail fiber protein gp53 from the Acinetobacter baumannii bacteriophage AP22 Biorxiv, 2019

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