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6DJK
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BU of 6djk by Molmil
Structure of DNA polymerase III subunit beta from Rickettsia typhi in complex with a natural product
分子名称: 1,2-ETHANEDIOL, ACE-MVA-MP8-NZC-LEU-MP8-LEU-MVA-PRO-MLU-GLY, Beta sliding clamp, ...
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2018-05-25
公開日2019-05-29
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure of DNA polymerase III subunit beta from Rickettsia typhi in complex with a natural product
to be published
9GON
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BU of 9gon by Molmil
Crystal structure of DPP9 in complex with sulphostin
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Sewald, L, Tabak, W.W.A, Fehr, L, Zolg, S, Najdzion, M, Verhoef, C.J.A, Podlesainski, D, Geiss-Friedlander, R, Lammens, A, Kaschani, F, Hellerschmied, D, Huber, R, Kaiser, M.
登録日2024-09-05
公開日2025-07-16
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Sulphostin-inspired N-phosphonopiperidones as selective covalent DPP8 and DPP9 inhibitors.
Nat Commun, 16, 2025
3EH9
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BU of 3eh9 by Molmil
Crystal structure of death associated protein kinase complexed with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Death-associated protein kinase 1, SULFATE ION
著者McNamara, L.K, Watterson, D.M, Brunzelle, J.S.
登録日2008-09-11
公開日2009-04-28
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural insight into nucleotide recognition by human death-associated protein kinase.
Acta Crystallogr.,Sect.D, 65, 2009
1ECE
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BU of 1ece by Molmil
ACIDOTHERMUS CELLULOLYTICUS ENDOCELLULASE E1 CATALYTIC DOMAIN IN COMPLEX WITH A CELLOTETRAOSE
分子名称: ENDOCELLULASE E1, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose-(1-4)-beta-D-glucopyranose
著者Sakon, J, Thomas, S.R, Himmel, M.E, Karplus, P.A.
登録日1996-04-04
公開日1996-10-14
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Crystal structure of thermostable family 5 endocellulase E1 from Acidothermus cellulolyticus in complex with cellotetraose.
Biochemistry, 35, 1996
3MUX
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BU of 3mux by Molmil
The Crystal Structure of a putative 4-hydroxy-2-oxoglutarate aldolase from Bacillus anthracis to 1.45A
分子名称: CHLORIDE ION, SODIUM ION, putative 4-hydroxy-2-oxoglutarate aldolase
著者Stein, A.J, Hatzos-Skintges, C, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2010-05-03
公開日2010-05-12
最終更新日2024-11-27
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献The Crystal Structure of a putative 4-hydroxy-2-oxoglutarate aldolase from Bacillus anthracis to 1.45A
To be Published
3MXU
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BU of 3mxu by Molmil
Crystal structure of glycine cleavage system protein H from Bartonella henselae
分子名称: 1,2-ETHANEDIOL, CITRIC ACID, Glycine cleavage system H protein, ...
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2010-05-07
公開日2010-05-26
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of glycine cleavage system protein H from Bartonella henselae
To be Published
9G1S
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BU of 9g1s by Molmil
Fragment screening of FosAKP, cryo structure in complex with fragment F2X-entry H01
分子名称: 1,2-ETHANEDIOL, Fosfomycin resistance protein, MANGANESE (II) ION, ...
著者Guenther, S, Galchenkova, M, Fischer, P, Reinke, P.Y.A, Falke, S, Thekku Veedu, S, Rodrigues, A.C, Senst, J, Meents, A.
登録日2024-07-10
公開日2025-07-23
最終更新日2025-10-22
実験手法X-RAY DIFFRACTION (1.12 Å)
主引用文献Room-temperature X-ray fragment screening with serial crystallography.
Nat Commun, 16, 2025
9G1R
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BU of 9g1r by Molmil
Fragment screening of FosAKP, cryo structure in complex with fragment F2X-entry G12
分子名称: 1,2-ETHANEDIOL, Fosfomycin resistance protein, MANGANESE (II) ION, ...
著者Guenther, S, Galchenkova, M, Fischer, P, Reinke, P.Y.A, Falke, S, Thekku Veedu, S, Rodrigues, A.C, Senst, J, Meents, A.
登録日2024-07-10
公開日2025-07-23
最終更新日2025-10-22
実験手法X-RAY DIFFRACTION (1.24 Å)
主引用文献Room-temperature X-ray fragment screening with serial crystallography.
Nat Commun, 16, 2025
3E5P
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BU of 3e5p by Molmil
Crystal structure of alanine racemase from E.faecalis
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Alanine racemase, NONAETHYLENE GLYCOL, ...
著者Hwang, K.Y, Priyadarshi, A, Lee, E.H, Sung, M.W.
登録日2008-08-14
公開日2009-08-18
最終更新日2024-12-25
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural insights into the alanine racemase from Enterococcus faecalis.
Biochim.Biophys.Acta, 1794, 2009
9G1I
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BU of 9g1i by Molmil
Fragment screening of FosAKP, cryo structure, ground state
分子名称: 1,2-ETHANEDIOL, Fosfomycin resistance protein, MANGANESE (II) ION
著者Guenther, S, Galchenkova, M, Fischer, P, Reinke, P.Y.A, Falke, S, Thekku Veedu, S, Rodrigues, A.C, Senst, J, Meents, A.
登録日2024-07-10
公開日2025-07-23
最終更新日2025-10-22
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Room-temperature X-ray fragment screening with serial crystallography.
Nat Commun, 16, 2025
5LYL
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BU of 5lyl by Molmil
Crystal structure of 1 in complex with tafCPB
分子名称: (2~{S})-2-[[(2~{S})-1-(1-adamantylamino)-3-cyclohexyl-1-oxidanylidene-propan-2-yl]sulfamoylamino]-6-azanyl-hexanoic acid, Carboxypeptidase B, ZINC ION
著者Schreuder, H, Liesum, A, Loenze, P.
登録日2016-09-28
公開日2016-10-26
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Sulfamide as Zinc Binding Motif in Small Molecule Inhibitors of Activated Thrombin Activatable Fibrinolysis Inhibitor (TAFIa).
J. Med. Chem., 59, 2016
2P3G
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BU of 2p3g by Molmil
Crystal structure of a pyrrolopyridine inhibitor bound to MAPKAP Kinase-2
分子名称: 2-[2-(2-FLUOROPHENYL)PYRIDIN-4-YL]-1,5,6,7-TETRAHYDRO-4H-PYRROLO[3,2-C]PYRIDIN-4-ONE, MAP kinase-activated protein kinase 2
著者Kurumbail, R.G, Caspers, N.
登録日2007-03-08
公開日2007-06-12
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (3.8 Å)
主引用文献Pyrrolopyridine Inhibitors of Mitogen-Activated Protein Kinase-Activated Protein Kinase 2 (MK-2).
J.Med.Chem., 50, 2007
3EDE
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BU of 3ede by Molmil
Structural base for cyclodextrin hydrolysis
分子名称: CALCIUM ION, Cyclomaltodextrinase, GLYCEROL
著者Buedenbender, S, Schulz, G.E.
登録日2008-09-03
公開日2009-03-03
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Structural base for enzymatic cyclodextrin hydrolysis
J.Mol.Biol., 385, 2009
3N0W
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BU of 3n0w by Molmil
Crystal structure of a branched chain amino acid ABC transporter periplasmic ligand-binding protein (Bxe_C0949) from BURKHOLDERIA XENOVORANS LB400 at 1.88 A resolution
分子名称: ABC branched chain amino acid family transporter, periplasmic ligand binding protein, NICKEL (II) ION
著者Joint Center for Structural Genomics (JCSG)
登録日2010-05-14
公開日2010-06-02
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.88 Å)
主引用文献Crystal structure of a branched chain amino acid ABC transporter periplasmic ligand-binding protein (Bxe_C0949) from BURKHOLDERIA XENOVORANS LB400 at 1.88 A resolution
To be published
6ZQK
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BU of 6zqk by Molmil
HER2-binding scFv-Fab fusion 841
分子名称: 1,2-ETHANEDIOL, 841 heavy chain, 841 light chain
著者Kast, F, Schwill, M, Stueber, J.C, Pfundstein, S, Nagy-Davidescu, G, Monne Rodriguez, J.M, Seehusen, F, Richter, C.P, Honegger, A, Hartmann, K.P, Weber, T.G, Kroener, F, Ernst, P, Piehler, J, Plueckthun, A.
登録日2020-07-09
公開日2021-06-30
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Engineering an anti-HER2 biparatopic antibody with a multimodal mechanism of action.
Nat Commun, 12, 2021
7A55
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BU of 7a55 by Molmil
Structure of DYRK1A in complex with compound 8
分子名称: 3-(1-methylpyrazol-4-yl)-1~{H}-pyrazole-5-carboxylic acid, Dual specificity tyrosine-phosphorylation-regulated kinase 1A
著者Dokurno, P, Surgenor, A.E, Hubbard, R.E.
登録日2020-08-20
公開日2021-06-30
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Fragment-Derived Selective Inhibitors of Dual-Specificity Kinases DYRK1A and DYRK1B.
J.Med.Chem., 64, 2021
3N56
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BU of 3n56 by Molmil
Crystal Structure of human Insulin-degrading enzyme (IDE) in complex with human B-type natriuretic peptide (BNP)
分子名称: 1,4-DIETHYLENE DIOXIDE, Insulin-degrading enzyme, Natriuretic peptides B, ...
著者Funke, T, Guo, Q, Tang, W.-J.
登録日2010-05-24
公開日2010-11-17
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.102 Å)
主引用文献Crystal Structure of human Insulin-degrading enzyme (IDE) in complex with human B-type natriuretic peptide (BNP)
To be Published
6DK2
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BU of 6dk2 by Molmil
Bacteroidetes AC2a SusD-like
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, SULFATE ION, ...
著者Koropatkin, N.M.
登録日2018-05-28
公開日2018-08-01
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.02 Å)
主引用文献To Be Published
To Be Published
2OU9
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BU of 2ou9 by Molmil
Structure of Spin-labeled T4 Lysozyme Mutant T115R1/R119A
分子名称: Lysozyme, S-[(1-oxyl-2,2,5,5-tetramethyl-2,5-dihydro-1H-pyrrol-3-yl)methyl] methanesulfonothioate
著者Guo, Z, Cascio, D, Hideg, K, Hubbell, W.L.
登録日2007-02-09
公開日2007-06-12
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structural determinants of nitroxide motion in spin-labeled proteins: Tertiary contact and solvent-inaccessible sites in helix G of T4 lysozyme.
Protein Sci., 16, 2007
3MTQ
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BU of 3mtq by Molmil
Crystal structure of a putative phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) permease (KPN_04802) from Klebsiella pneumoniae subsp. pneumoniae MGH 78578 at 1.70 A resolution
分子名称: putative phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) permease
著者Joint Center for Structural Genomics (JCSG)
登録日2010-04-30
公開日2010-05-26
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Crystal structure of a putative phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS) permease (KPN_04802) from Klebsiella pneumoniae subsp. pneumoniae MGH 78578 at 1.70 A resolution
To be published
3MUJ
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BU of 3muj by Molmil
Early B-cell factor 3 (EBF3) IPT/TIG and dimerization helices
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, Transcription factor COE3
著者Siponen, M.I, Lehtio, L, Arrowsmith, C.H, Bountra, C, Collins, R, Edwards, A.M, Flodin, S, Flores, A, Graslund, S, Hammarstrom, M, Johansson, I, Karlberg, T, Kotenyova, T, Moche, M, Nordlund, P, Nyman, T, Persson, C, Schueler, H, Schutz, P, Svensson, L, Thorsell, A.G, Tresaugues, L, Van Den Berg, S, Wahlberg, E, Weigelt, J, Welin, M, Wisniewska, M, Berglund, H, Structural Genomics Consortium (SGC)
登録日2010-05-03
公開日2010-06-30
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.92 Å)
主引用文献Structural Determination of Functional Domains in Early B-cell Factor (EBF) Family of Transcription Factors Reveals Similarities to Rel DNA-binding Proteins and a Novel Dimerization Motif.
J.Biol.Chem., 285, 2010
6ZMV
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BU of 6zmv by Molmil
Structure of muramidase from Trichobolus zukalii
分子名称: GLYCEROL, SULFATE ION, muramidase
著者Moroz, O.V, Blagova, E, Taylor, E, Turkenburg, J.P, Skov, L.K, Gippert, G.P, Schnorr, K.M, Ming, L, Ye, L, Klausen, M, Cohn, M.T, Schmidt, E.G.W, Nymand-Grarup, S, Davies, G.J, Wilson, K.S.
登録日2020-07-04
公開日2021-07-14
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Fungal GH25 muramidases: New family members with applications in animal nutrition and a crystal structure at 0.78 angstrom resolution.
Plos One, 16, 2021
1MPX
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BU of 1mpx by Molmil
ALPHA-AMINO ACID ESTER HYDROLASE LABELED WITH SELENOMETHIONINE
分子名称: CALCIUM ION, GLYCEROL, alpha-amino acid ester hydrolase
著者Barends, T.R.M, Polderman-Tijmes, J.J, Jekel, P.A, Hensgens, C.M.H, de Vries, E.J, Janssen, D.B, Dijkstra, B.W.
登録日2002-09-13
公開日2003-04-15
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The sequence and crystal structure of the alpha-amino acid ester hydrolase from Xanthomonas citri define a new family of beta-lactam antibiotic acylases.
J.Biol.Chem., 278, 2003
5LYI
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BU of 5lyi by Molmil
Crystal structure of 1 in complex with tafCPB
分子名称: (2~{S})-6-azanyl-2-[[(2~{S})-3-cyclohexyl-1-oxidanylidene-1-[[(1~{R},2~{S},4~{R})-1,7,7-trimethyl-2-bicyclo[2.2.1]hepta nyl]amino]propan-2-yl]sulfamoylamino]hexanoic acid, Carboxypeptidase B, ZINC ION
著者Schreuder, H, Liesum, A, Loenze, P.
登録日2016-09-28
公開日2016-10-26
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (1.64 Å)
主引用文献Sulfamide as Zinc Binding Motif in Small Molecule Inhibitors of Activated Thrombin Activatable Fibrinolysis Inhibitor (TAFIa).
J. Med. Chem., 59, 2016
8INW
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BU of 8inw by Molmil
Crystal Structure of SARS-CoV-2 Main Protease (Mpro) K90R Mutant in Complex with Inhibitor nirmatrelvir
分子名称: (1R,2S,5S)-N-{(1E,2S)-1-imino-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-6,6-dimethyl-3-[3-methyl-N-(trifluoroacetyl)-L-valyl]-3-azabicyclo[3.1.0]hexane-2-carboxamide, 3C-like proteinase
著者Lin, M, Liu, X.
登録日2023-03-10
公開日2024-03-13
最終更新日2025-04-09
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Molecular mechanism of ensitrelvir inhibiting SARS-CoV-2 main protease and its variants.
Commun Biol, 6, 2023

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