8OUW
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![BU of 8ouw by Molmil](/molmil-images/mine/8ouw) | Cryo-EM structure of CMG helicase bound to TIM-1/TIPN-1 and homodimeric DNSN-1 on fork DNA (Caenorhabditis elegans) | 分子名称: | Cell division control protein 45 homolog, DNA Lagging Strand Template, DNA Leading Strand Template, ... | 著者 | Jenkyn-Bedford, M, Yeeles, J.T.P, Labib, K.P.M. | 登録日 | 2023-04-25 | 公開日 | 2023-08-16 | 最終更新日 | 2023-10-04 | 実験手法 | ELECTRON MICROSCOPY (3.75 Å) | 主引用文献 | DNSN-1 recruits GINS for CMG helicase assembly during DNA replication initiation in Caenorhabditis elegans. Science, 381, 2023
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4KHN
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![BU of 4khn by Molmil](/molmil-images/mine/4khn) | Crystal structure of the ternary complex of the D714A mutant of RB69 DNA polymerase | 分子名称: | 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]guanosine, CALCIUM ION, DNA (5'-D(*GP*CP*GP*GP*AP*CP*TP*GP*CP*TP*TP*AP*C)-3'), ... | 著者 | Guja, K.E, Jacewicz, A, Trzemecka, A, Plochocka, D, Yakubovskaya, E, Bebenek, A, Garcia-Diaz, M. | 登録日 | 2013-04-30 | 公開日 | 2013-10-09 | 最終更新日 | 2023-09-20 | 実験手法 | X-RAY DIFFRACTION (2.55 Å) | 主引用文献 | A Remote Palm Domain Residue of RB69 DNA Polymerase Is Critical for Enzyme Activity and Influences the Conformation of the Active Site. Plos One, 8, 2013
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8TLL
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![BU of 8tll by Molmil](/molmil-images/mine/8tll) | CDCA7 (Mouse) Binds Non-B-form 26-mer DNA oligo | 分子名称: | 1,2-ETHANEDIOL, Cell division cycle-associated protein 7, DNA (26-MER), ... | 著者 | Horton, J.R, Ren, R, Cheng, X. | 登録日 | 2023-07-26 | 公開日 | 2024-08-21 | 最終更新日 | 2024-08-28 | 実験手法 | X-RAY DIFFRACTION (2.58 Å) | 主引用文献 | The ICF syndrome protein CDCA7 harbors a unique DNA-binding domain that recognizes a CpG dyad in the context of a non-B DNA. Biorxiv, 2023
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8TLJ
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![BU of 8tlj by Molmil](/molmil-images/mine/8tlj) | CDCA7 (Mouse) Binds Non-B-form 32-mer DNA oligo Containing a 5mC | 分子名称: | 1,2-ETHANEDIOL, Cell division cycle-associated protein 7, DNA (32-MER), ... | 著者 | Horton, J.R, Ren, R, Cheng, X. | 登録日 | 2023-07-26 | 公開日 | 2024-08-21 | 最終更新日 | 2024-08-28 | 実験手法 | X-RAY DIFFRACTION (2.3 Å) | 主引用文献 | The ICF syndrome protein CDCA7 harbors a unique DNA-binding domain that recognizes a CpG dyad in the context of a non-B DNA. Biorxiv, 2023
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8TLK
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![BU of 8tlk by Molmil](/molmil-images/mine/8tlk) | CDCA7 (Human) Binds Non-B-form 32-mer DNA oligo Containing a 5mC | 分子名称: | 1,2-ETHANEDIOL, Cell division cycle-associated protein 7, DNA (32-MER), ... | 著者 | Horton, J.R, Ren, R, Cheng, X. | 登録日 | 2023-07-26 | 公開日 | 2024-08-21 | 最終更新日 | 2024-08-28 | 実験手法 | X-RAY DIFFRACTION (2.99 Å) | 主引用文献 | The ICF syndrome protein CDCA7 harbors a unique DNA-binding domain that recognizes a CpG dyad in the context of a non-B DNA. Biorxiv, 2023
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8TLH
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![BU of 8tlh by Molmil](/molmil-images/mine/8tlh) | CDCA7 (Mouse) Binds Non-B-form 32-mer DNA oligo | 分子名称: | 1,2-ETHANEDIOL, Cell division cycle-associated protein 7, DNA (32-MER), ... | 著者 | Horton, J.R, Ren, R, Cheng, X. | 登録日 | 2023-07-26 | 公開日 | 2024-08-21 | 最終更新日 | 2024-08-28 | 実験手法 | X-RAY DIFFRACTION (1.94 Å) | 主引用文献 | The ICF syndrome protein CDCA7 harbors a unique DNA-binding domain that recognizes a CpG dyad in the context of a non-B DNA. Biorxiv, 2023
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8TLG
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![BU of 8tlg by Molmil](/molmil-images/mine/8tlg) | CDCA7 (Mouse) Binds Non-B-form 34-mer DNA oligo | 分子名称: | 1,2-ETHANEDIOL, Cell division cycle-associated protein 7, DNA (34-MER), ... | 著者 | Horton, J.R, Ren, R, Cheng, X. | 登録日 | 2023-07-26 | 公開日 | 2024-08-21 | 最終更新日 | 2024-08-28 | 実験手法 | X-RAY DIFFRACTION (2.09 Å) | 主引用文献 | The ICF syndrome protein CDCA7 harbors a unique DNA-binding domain that recognizes a CpG dyad in the context of a non-B DNA. Biorxiv, 2023
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1RAM
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![BU of 1ram by Molmil](/molmil-images/mine/1ram) | A NOVEL DNA RECOGNITION MODE BY NF-KB P65 HOMODIMER | 分子名称: | 2,3-DIHYDROXY-1,4-DITHIOBUTANE, DNA (5'-D(*CP*GP*GP*CP*TP*GP*GP*AP*AP*AP*TP*TP*TP*CP*CP*AP*GP*CP*CP*G)-3'), PROTEIN (TRANSCRIPTION FACTOR NF-KB P65) | 著者 | Chen, Y.-Q, Ghosh, S, Ghosh, G. | 登録日 | 1997-11-22 | 公開日 | 1998-05-27 | 最終更新日 | 2024-02-14 | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | 主引用文献 | A novel DNA recognition mode by the NF-kappa B p65 homodimer. Nat.Struct.Biol., 5, 1998
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4M3W
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![BU of 4m3w by Molmil](/molmil-images/mine/4m3w) | |
4M3Z
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![BU of 4m3z by Molmil](/molmil-images/mine/4m3z) | |
4M41
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![BU of 4m41 by Molmil](/molmil-images/mine/4m41) | |
4M3X
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![BU of 4m3x by Molmil](/molmil-images/mine/4m3x) | |
4M42
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![BU of 4m42 by Molmil](/molmil-images/mine/4m42) | |
2ITL
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![BU of 2itl by Molmil](/molmil-images/mine/2itl) | |
3CFR
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![BU of 3cfr by Molmil](/molmil-images/mine/3cfr) | Structure of the replicating complex of a POL Alpha family DNA Polymerase, ternary complex 2 | 分子名称: | CALCIUM ION, CHLORIDE ION, DNA (5'-D(*DGP*DCP*DGP*DGP*DAP*DCP*DTP*DGP*DCP*DTP*DTP*DAP*(DOC))-3'), ... | 著者 | Wang, J, Klimenko, D, Wang, M, Steitz, T.A, Konigsberg, W.H. | 登録日 | 2008-03-04 | 公開日 | 2009-03-10 | 最終更新日 | 2023-08-30 | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | 主引用文献 | Insights into base selectivity from the structures
of an RB69 DNA Polymerase triple mutant To be Published
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4M3R
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![BU of 4m3r by Molmil](/molmil-images/mine/4m3r) | |
4M45
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4M3U
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![BU of 4m3u by Molmil](/molmil-images/mine/4m3u) | |
4M3T
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![BU of 4m3t by Molmil](/molmil-images/mine/4m3t) | |
4M3Y
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3EYZ
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![BU of 3eyz by Molmil](/molmil-images/mine/3eyz) | Cocrystal structure of Bacillus fragment DNA polymerase I with duplex DNA (open form) | 分子名称: | 5'-D(*DAP*DTP*DGP*DCP*DGP*DAP*DGP*DTP*DCP*DAP*DGP*DGP*DA)-3', 5'-D(*DCP*DCP*DTP*DGP*DAP*DCP*DTP*DCP*DGP*DC)-3', DNA polymerase I, ... | 著者 | Warren, J.J, Wu, E.Y, Golosov, A.A, Karplus, M, Beese, L.S. | 登録日 | 2008-10-22 | 公開日 | 2009-11-10 | 最終更新日 | 2023-09-06 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | The Mechanism of the Translocation Step in DNA Replication by DNA Polymerase I: A Computer Simulation Analysis. Structure, 18, 2010
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5MGA
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1WYW
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![BU of 1wyw by Molmil](/molmil-images/mine/1wyw) | Crystal Structure of SUMO1-conjugated thymine DNA glycosylase | 分子名称: | CHLORIDE ION, G/T mismatch-specific thymine DNA glycosylase, MAGNESIUM ION, ... | 著者 | Baba, D, Maita, N, Jee, J.G, Uchimura, Y, Saitoh, H, Sugasawa, K, Hanaoka, F, Tochio, H, Hiroaki, H, Shirakawa, M. | 登録日 | 2005-02-17 | 公開日 | 2005-06-21 | 最終更新日 | 2023-10-25 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | Crystal structure of thymine DNA glycosylase conjugated to SUMO-1. Nature, 435, 2005
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1C0W
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![BU of 1c0w by Molmil](/molmil-images/mine/1c0w) | CRYSTAL STRUCTURE OF THE COBALT-ACTIVATED DIPHTHERIA TOXIN REPRESSOR-DNA COMPLEX REVEALS A METAL BINDING SH-LIKE DOMAIN | 分子名称: | COBALT (II) ION, DIPHTHERIA TOXIN REPRESSOR, DNA (5'-D(P*AP*TP*TP*AP*GP*GP*TP*TP*AP*GP*CP*CP*TP*AP*CP*CP*CP*TP*AP*AP*T)-3'), ... | 著者 | Pohl, E, Holmes, R.K, Hol, W.G. | 登録日 | 1999-07-22 | 公開日 | 2000-07-22 | 最終更新日 | 2023-08-09 | 実験手法 | X-RAY DIFFRACTION (3.2 Å) | 主引用文献 | Crystal structure of a cobalt-activated diphtheria toxin repressor-DNA complex reveals a metal-binding SH3-like domain. J.Mol.Biol., 292, 1999
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4FLT
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![BU of 4flt by Molmil](/molmil-images/mine/4flt) | |