PDB: 5515 件ウェブページステータス検索Chemie searchBIRD

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5D7C	Crystal structure of the ATP binding domain of S. aureus GyrB complexed with a ligand 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 1-ethyl-3-[1-(pyridin-2-yl)-6-(pyridin-3-yl)-1H-pyrrolo[3,2-b]pyridin-3-yl]urea, DNA gyrase subunit B, ... 著者 Zhang, J, Yang, Q, Cross, J.B, Romero, J.A.C, Ryan, M.D, Lippa, B, Dolle, R.E, Andersen, O.A, Barker, J, Cheng, R.K, Kahmann, J, Felicetti, B, Wood, M, Scheich, C. 登録日 2015-08-13 公開日 2015-11-25 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Discovery of Azaindole Ureas as a Novel Class of Bacterial Gyrase B Inhibitors. J.Med.Chem., 58, 2015
6WXM	X-ray crystallographic structure of a beta-hairpin peptide derived from amyloid beta 16-36 分子名称: Amyloid-beta protein, HEXANE-1,6-DIOL 著者 Kreutzer, A.G, Nowick, J.S. 登録日 2020-05-11 公開日 2020-07-08 最終更新日 2020-08-26 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 X-ray Crystallography Reveals Parallel and Antiparallel beta-Sheet Dimers of a beta-Hairpin Derived from A beta16-36that Assemble to Form Different Tetramers. Acs Chem Neurosci, 11, 2020
6WSJ	Crystal Structure of Danio rerio histone deacetylase 6 catalytic domain 2 complexed with cyclopeptide des4.3.1 分子名称: 1,2-ETHANEDIOL, Hdac6 protein, POTASSIUM ION, ... 著者 Watson, P.R, Christianson, D.W. 登録日 2020-05-01 公開日 2021-04-28 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Anchor extension: a structure-guided approach to design cyclic peptides targeting enzyme active sites. Nat Commun, 12, 2021
8GA9	C4HR1_4r: Extendable repeat protein tetramer 分子名称: C4HR1_4r 著者 Bethel, N.P, Borst, A.J. 登録日 2023-02-22 公開日 2023-08-30 最終更新日 2023-12-20 実験手法 ELECTRON MICROSCOPY (3.71 Å) 主引用文献 Precisely patterned nanofibres made from extendable protein multiplexes. Nat.Chem., 15, 2023
8G8I	C3HR3_9r_shift4: Extendable repeat protein fiber 分子名称: C3HR3_9r_shift4 著者 Bethel, N.P, Borst, A.J. 登録日 2023-02-17 公開日 2023-08-30 最終更新日 2023-12-13 実験手法 ELECTRON MICROSCOPY (3.92 Å) 主引用文献 Precisely patterned nanofibres made from extendable protein multiplexes. Nat.Chem., 15, 2023
8GAQ	C5HR2_4r: Extendable repeat protein pentamer 分子名称: C5HR2_4r 著者 Bethel, N.P, Borst, A.J. 登録日 2023-02-23 公開日 2023-08-30 最終更新日 2023-12-20 実験手法 ELECTRON MICROSCOPY (3.73 Å) 主引用文献 Precisely patterned nanofibres made from extendable protein multiplexes. Nat.Chem., 15, 2023
8GAA	C6HR1_4r: Extendable repeat protein hexamer 分子名称: C6HR1_4r 著者 Bethel, N.P, Borst, A.J, Baker, D. 登録日 2023-02-22 公開日 2023-08-30 最終更新日 2023-12-20 実験手法 ELECTRON MICROSCOPY (4.24 Å) 主引用文献 Precisely patterned nanofibres made from extendable protein multiplexes. Nat.Chem., 15, 2023
8GOI	23-residues Heterotetramic Antiparallel Coiled-Coil Derived From LacI 分子名称: GLYCEROL, Lac23ys_aEE, an acidic mutant of LacI C-terminal tetramerization helix, ... 著者 Kumasaka, T. 登録日 2022-08-25 公開日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.54 Å) 主引用文献 Design of interchain Glu-Arg salt-bridges stabilizing heterotetrameric coiled-coil derived from Lac repressor. To Be Published
8GOJ	23-residues Heterotetramic Antiparallel Coiled-Coil Derived From LacI 分子名称: Lac23ys_EE, an acidic mutant of LacI C-terminal tetramerization helix, Lac23ys_KK, ... 著者 Kumasaka, T. 登録日 2022-08-25 公開日 2023-08-30 実験手法 X-RAY DIFFRACTION (1.38 Å) 主引用文献 Design of interchain Glu-Arg salt-bridges stabilizing heterotetrameric coiled-coil derived from Lac repressor. To Be Published
8GJC	X-ray crystallographic structure of a beta-hairpin peptide derived from Abeta 17-35. (ORN)LVFFAED(ORN)GAI(N-Me-Ile)GLM 分子名称: DI(HYDROXYETHYL)ETHER, METHIONINE, beta-hairpin peptide derived from Abeta 17-35, ... 著者 Kreutzer, A.G, Ruttenberg, S.M, Nowick, J.S. 登録日 2023-03-15 公開日 2024-01-17 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.431 Å) 主引用文献 beta-Hairpin Alignment Alters Oligomer Formation in A beta-Derived Peptides. Biochemistry, 63, 2024
8GJD	X-ray crystallographic structure of a beta-hairpin peptide derived from Abeta 17-36. (ORN)LVFFAED(ORN)AII(N-Me-Gly)LMV 分子名称: Beta-hairpin peptide derived from Abeta 17-36, IODIDE ION 著者 Kreutzer, A.G, Ruttenberg, S.M, Nowick, J.S, Truex, N.L. 登録日 2023-03-15 公開日 2024-01-17 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.03 Å) 主引用文献 beta-Hairpin Alignment Alters Oligomer Formation in A beta-Derived Peptides. Biochemistry, 63, 2024
6Y07	Designing a Granulopoietic Protein by Topological Rescaffolding 1: Sohair 分子名称: sohair 著者 ElGamacy, M, Coles, M. 登録日 2020-02-06 公開日 2020-03-18 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Design of novel granulopoietic proteins by topological rescaffolding. Plos Biol., 18, 2020
8FEG	CryoEM structure of Kappa Opioid Receptor bound to a semi-peptide and Gi1 分子名称: ACE-TYR-ALA-DTY-THR-THR-CYS-THR-DPN-XT9, Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, ... 著者 Fay, J.F, Che, T. 登録日 2022-12-06 公開日 2023-12-06 最終更新日 2024-01-17 実験手法 ELECTRON MICROSCOPY (2.54 Å) 主引用文献 Design and structural validation of peptide-drug conjugate ligands of the kappa-opioid receptor. Nat Commun, 14, 2023
8I8Y	A mutant of the C-terminal complex of proteins 4.1G and NuMA 分子名称: Engineered protein 著者 Hu, X. 登録日 2023-02-06 公開日 2023-04-19 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Combined prediction and design reveals the target recognition mechanism of an intrinsically disordered protein interaction domain. Proc.Natl.Acad.Sci.USA, 120, 2023
6W1D	Structure of human mitochondrial complex Nfs1-ISCU2 (WT)-ISD11 with E.coli ACP1 at 1.8 A resolution (NIAU)2 分子名称: 1,2-ETHANEDIOL, 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 2,5,8,11,14,17-HEXAOXANONADECAN-19-OL, ... 著者 Boniecki, M.T, Cygler, M. 登録日 2020-03-04 公開日 2020-03-18 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.795 Å) 主引用文献 The essential function of ISCU2 and its conserved N-terminus in Fe/S cluster biogenesis To Be Published
6W2Q	Junction 34, DHR53-DHR4 分子名称: CALCIUM ION, Junction 34 著者 Bick, M.J, Brunette, T.J, Baker, D. 登録日 2020-03-08 公開日 2020-04-15 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Modular repeat protein sculpting using rigid helical junctions. Proc.Natl.Acad.Sci.USA, 117, 2020
6W2W	Junction 24, DHR14-DHR18 分子名称: Junction 24 DHR14-DHR18 著者 Bick, M.J, Brunette, T.J, Baker, D. 登録日 2020-03-08 公開日 2020-04-15 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.21 Å) 主引用文献 Modular repeat protein sculpting using rigid helical junctions. Proc.Natl.Acad.Sci.USA, 117, 2020
6W2R	Junction 19, DHR54-DHR79 分子名称: Junction 19 DHR54-DHR79 著者 Bick, M.J, Brunette, T.J, Baker, D. 登録日 2020-03-08 公開日 2020-04-15 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.344 Å) 主引用文献 Modular repeat protein sculpting using rigid helical junctions. Proc.Natl.Acad.Sci.USA, 117, 2020
7TMK	Porous framework formed by assembly of a bipyridyl-conjugated helical peptide 分子名称: 5'-(hydrazinecarbonyl)[2,2'-bipyridine]-5-carboxamide, ACETONITRILE, ethyl 5'-formyl[2,2'-bipyridine]-5-carboxylate, ... 著者 Nguyen, A.I. 登録日 2022-01-19 公開日 2022-04-20 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (0.83 Å) 主引用文献 Assembly of pi-Stacking Helical Peptides into a Porous and Multivariable Proteomimetic Framework. J.Am.Chem.Soc., 144, 2022
7TLU	Porous framework formed by assembly of a bipyridyl-conjugated helical peptide 分子名称: 5'-(hydrazinecarbonyl)[2,2'-bipyridine]-5-carboxamide, ACETONITRILE, ethyl 5'-formyl[2,2'-bipyridine]-5-carboxylate, ... 著者 Nguyen, A.I. 登録日 2022-01-18 公開日 2022-04-20 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (0.79 Å) 主引用文献 Assembly of pi-Stacking Helical Peptides into a Porous and Multivariable Proteomimetic Framework. J.Am.Chem.Soc., 144, 2022
7TMH	Porous framework formed by assembly of a bipyridyl-conjugated helical peptide 分子名称: 5'-(hydrazinecarbonyl)[2,2'-bipyridine]-5-carboxamide, ACETONITRILE, ethyl 5'-formyl[2,2'-bipyridine]-5-carboxylate, ... 著者 Nguyen, A.I. 登録日 2022-01-19 公開日 2022-04-20 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (0.8 Å) 主引用文献 Assembly of pi-Stacking Helical Peptides into a Porous and Multivariable Proteomimetic Framework. J.Am.Chem.Soc., 144, 2022
7TML	Porous framework formed by assembly of a bipyridyl-conjugated helical peptide 分子名称: 5'-(hydrazinecarbonyl)[2,2'-bipyridine]-5-carboxamide, ACETONITRILE, ethyl 5'-formyl[2,2'-bipyridine]-5-carboxylate, ... 著者 Nguyen, A.I. 登録日 2022-01-19 公開日 2022-04-20 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (0.93 Å) 主引用文献 Assembly of pi-Stacking Helical Peptides into a Porous and Multivariable Proteomimetic Framework. J.Am.Chem.Soc., 144, 2022
7TLS	Porous framework formed by assembly of a bipyridyl-conjugated helical peptide 分子名称: 5'-(hydrazinecarbonyl)[2,2'-bipyridine]-5-carboxamide, ACETONITRILE, ethyl 5'-formyl[2,2'-bipyridine]-5-carboxylate, ... 著者 Nguyen, A.I. 登録日 2022-01-18 公開日 2022-04-20 最終更新日 2022-04-27 実験手法 X-RAY DIFFRACTION (0.73 Å) 主引用文献 Assembly of pi-Stacking Helical Peptides into a Porous and Multivariable Proteomimetic Framework. J.Am.Chem.Soc., 144, 2022
7TM2	Porous framework formed by assembly of a bipyridyl-conjugated helical peptide 分子名称: 5'-(hydrazinecarbonyl)[2,2'-bipyridine]-5-carboxamide, ethyl 5'-formyl[2,2'-bipyridine]-5-carboxylate, helical peptide, ... 著者 Nguyen, A.I. 登録日 2022-01-19 公開日 2022-04-20 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (0.88 Å) 主引用文献 Assembly of pi-Stacking Helical Peptides into a Porous and Multivariable Proteomimetic Framework. J.Am.Chem.Soc., 144, 2022
7TMJ	Porous framework formed by assembly of a bipyridyl-conjugated helical peptide 分子名称: 5'-(hydrazinecarbonyl)[2,2'-bipyridine]-5-carboxamide, NITRATE ION, SILVER ION, ... 著者 Nguyen, A.I. 登録日 2022-01-19 公開日 2022-04-20 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1 Å) 主引用文献 Assembly of pi-Stacking Helical Peptides into a Porous and Multivariable Proteomimetic Framework. J.Am.Chem.Soc., 144, 2022

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