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2E3S
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Crystal structure of CERT START domain co-crystallized with C24-ceramide (P21)
分子名称: Lipid-transfer protein CERT
著者Kudo, N, Kumagai, K, Wakatsuki, S, Nishijima, M, Hanada, K, Kato, R.
登録日2006-11-28
公開日2007-12-18
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Structural basis for specific lipid recognition by CERT responsible for nonvesicular trafficking of ceramide.
Proc.Natl.Acad.Sci.Usa, 105, 2008
2E3T
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Crystal structure of rat xanthine oxidoreductase mutant (W335A and F336L)
分子名称: BICARBONATE ION, CALCIUM ION, FE2/S2 (INORGANIC) CLUSTER, ...
著者Asai, R, Nishino, T, Matsumura, T, Okamoto, K, Pai, E.F, Nishino, T.
登録日2006-11-28
公開日2007-09-25
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Two mutations convert mammalian xanthine oxidoreductase to highly superoxide-productive xanthine oxidase
J.Biochem.(Tokyo), 141, 2007
2E3U
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Crystal structure analysis of Dim2p from Pyrococcus horikoshii OT3
分子名称: Hypothetical protein PH1566
著者Tanokura, M, Jia, M.Z.
登録日2006-11-29
公開日2007-10-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of Dim2p: a preribosomal RNA processing factor, from Pyrococcus horikoshii OT3 at 2.30 A
Proteins, 69, 2007
2E3V
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Crystal structure of the first fibronectin type III domain of neural cell adhesion molecule splicing isoform from human muscle culture lambda-4.4
分子名称: 1,2-ETHANEDIOL, 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, DI(HYDROXYETHYL)ETHER, ...
著者Nishino, A, Saijo, S, Kishishita, S, Chen, L, Liu, Z.J, Wang, B.C, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-11-30
公開日2007-06-05
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure of the first fibronectin type III domain of neural cell adhesion molecule splicing isoform from human muscle culture lambda-4.4
To be Published
2E3W
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X-ray structure of native RNase A
分子名称: CHLORIDE ION, Ribonuclease pancreatic
著者Boerema, D.J, Tereshko, V.A, Kent, S.B.H.
登録日2006-11-30
公開日2007-10-30
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Total synthesis by modern chemical ligation methods and high resolution (1.1 A) X-ray structure of ribonuclease A
Biopolymers, 90, 2008
2E3X
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Crystal structure of Russell's viper venom metalloproteinase
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 3-(N-HYDROXYCARBOXAMIDO)-2-ISOBUTYLPROPANOYL-TRP-METHYLAMIDE, ...
著者Igarashi, T, Takeda, S.
登録日2006-11-30
公開日2007-12-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.91 Å)
主引用文献Crystal structure of RVV-X: an example of evolutionary gain of specificity by ADAM proteinases.
Febs Lett., 581, 2007
2E3Z
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Crystal structure of intracellular family 1 beta-glucosidase BGL1A from the basidiomycete Phanerochaete chrysosporium in substrate-free form
分子名称: Beta-glucosidase
著者Nijikken, Y, Tsukada, T, Igarashi, K, Samejima, M, Fushinobu, S.
登録日2006-12-01
公開日2007-03-20
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal structure of intracellular family 1 beta-glucosidase BGL1A from the basidiomycete Phanerochaete chrysosporium
Febs Lett., 581, 2007
2E40
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Crystal structure of intracellular family 1 beta-glucosidase BGL1A from the basidiomycete Phanerochaete chrysosporium in complex with gluconolactone
分子名称: Beta-glucosidase, D-glucono-1,5-lactone
著者Nijikken, Y, Tsukada, T, Igarashi, K, Samejima, M, Fushinobu, S.
登録日2006-12-01
公開日2007-03-27
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal structure of intracellular family 1 beta-glucosidase BGL1A from the basidiomycete Phanerochaete chrysosporium
Febs Lett., 581, 2007
2E41
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Crystal Structure Of Biotin Protein Ligase From Pyrococcus Horikoshii Complexed with the Reaction Product Analog Biotinol-5'-AMP, Mutations R48A and K111A
分子名称: ((2R,3S,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3,4-DIHYDROXY-TETRAHYDROFURAN-2-YL)METHYL 5-((3AS,4S,6AR)-2-OXO-HEXAHYDRO-1H-THIENO[3,4-D]IMIDAZOL-4-YL)PENTYL HYDROGEN PHOSPHATE, biotin--[acetyl-CoA-carboxylase] ligase
著者Bagautdinov, B, Matsuura, Y, Bagautdinova, S, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-12-01
公開日2007-06-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Protein biotinylation visualized by a complex structure of biotin protein ligase with a substrate
J.Biol.Chem., 283, 2008
2E42
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Crystal structure of C/EBPbeta Bzip homodimer V285A mutant bound to A High Affinity DNA fragment
分子名称: CCAAT/enhancer-binding protein beta, DNA (5'-D(P*DAP*DAP*DTP*DAP*DTP*DTP*DGP*DCP*DGP*DCP*DAP*DAP*DTP*DCP*DCP*DT)-3'), DNA (5'-D(P*DTP*DAP*DGP*DGP*DAP*DTP*DTP*DGP*DCP*DGP*DCP*DAP*DAP*DTP*DAP*DT)-3')
著者Tahirov, T.H, Inoue-Bungo, T, Sato, K, Shiina, M, Hamada, K, Ogata, K.
登録日2006-12-01
公開日2007-12-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural Basis for Flexible Base Recognition by C/Ebpbeta
To be Published
2E43
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Crystal structure of C/EBPbeta Bzip homodimer K269A mutant bound to A High Affinity DNA fragment
分子名称: CCAAT/enhancer-binding protein beta, DNA (5'-D(P*DAP*DAP*DTP*DAP*DTP*DTP*DGP*DCP*DGP*DCP*DAP*DAP*DTP*DCP*DCP*DT)-3'), DNA (5'-D(P*DTP*DAP*DGP*DGP*DAP*DTP*DTP*DGP*DCP*DGP*DCP*DAP*DAP*DTP*DAP*DT)-3')
著者Tahirov, T.H, Inoue-Bungo, T, Sato, K, Shiina, M, Hamada, K, Ogata, K.
登録日2006-12-01
公開日2007-12-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural Basis for Flexible Base Recognition by C/Ebpbeta
To be Published
2E44
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Solution structure of RNA binding domain in Insulin-like growth factor 2 mRNA binding protein 3
分子名称: Insulin-like growth factor 2 mRNA binding protein 3
著者Furue, M, Tsuda, K, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-12-04
公開日2007-06-05
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of RNA binding domain in Insulin-like growth factor 2 mRNA binding protein 3
To be Published
2E45
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Solution structure of Fe65 WW domain
分子名称: Amyloid beta A4 precursor protein-binding family B member 1
著者Kouno, T, Mizuguchi, M, Nozawa, Y, Sugaya, T, Kawano, K.
登録日2006-12-04
公開日2006-12-26
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of Fe65 WW domain
to be published
2E46
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Crystal Structure Analysis of the clock protein EA4
分子名称: COPPER (II) ION, Time interval measuring enzyme TIME, ZINC ION
著者Park, S.-Y, Hiraki, T.
登録日2006-12-05
公開日2008-02-05
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献the clock protein EA4 ticks away with movement of a mobile copper ion
To be Published
2E47
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Crystal Structure Analysis of the clock protein EA4 (glycosylation form)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, COPPER (II) ION, Time interval measuring enzyme TIME, ...
著者Park, S.-Y, Hiraki, T.
登録日2006-12-05
公開日2007-12-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献the clock protein EA4 ticks away with movement of a mobile copper ion
To be Published
2E48
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Crystal Structure of Human D-Amino Acid Oxidase: Substrate-Free Holoenzyme
分子名称: D-amino-acid oxidase, FLAVIN-ADENINE DINUCLEOTIDE
著者Kawazoe, T, Tsuge, H, Imagawa, T, Fukui, K.
登録日2006-12-05
公開日2007-03-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural basis of d-DOPA oxidation by d-amino acid oxidase: Alternative pathway for dopamine biosynthesis.
Biochem.Biophys.Res.Commun., 355, 2007
2E49
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Crystal Structure of Human D-Amino Acid Oxidase in Complex with Imino-Serine
分子名称: 3-hydroxy-2-iminopropanoic acid, D-amino-acid oxidase, FLAVIN-ADENINE DINUCLEOTIDE
著者Kawazoe, T, Tsuge, H, Imagawa, T, Fukui, K.
登録日2006-12-05
公開日2007-03-06
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural basis of d-DOPA oxidation by d-amino acid oxidase: Alternative pathway for dopamine biosynthesis.
Biochem.Biophys.Res.Commun., 355, 2007
2E4A
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Crystal Structure of Human D-Amino Acid Oxidase in complex with o-aminobenzoate
分子名称: 2-AMINOBENZOIC ACID, D-amino-acid oxidase, FLAVIN-ADENINE DINUCLEOTIDE
著者Kawazoe, T, Tsuge, H, Imagawa, T, Fukui, K.
登録日2006-12-05
公開日2007-03-06
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structural basis of d-DOPA oxidation by d-amino acid oxidase: Alternative pathway for dopamine biosynthesis.
Biochem.Biophys.Res.Commun., 355, 2007
2E4E
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NMR structure of D4P/K7G mutant of GPM12
分子名称: GPM12
著者Terada, T, Satoh, D, Mikawa, T, Ito, Y, Shimizu, K.
登録日2006-12-06
公開日2008-02-05
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Understanding the roles of amino acid residues in tertiary structure formation of chignolin by using molecular dynamics simulation
To be Published
2E4F
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Crystal Structure of the Cytoplasmic Domain of G-Protein-Gated Inward Rectifier Potassium Channel Kir3.2
分子名称: G protein-activated inward rectifier potassium channel 2
著者Inanobe, A, Kurachi, Y.
登録日2006-12-06
公開日2007-06-12
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.302 Å)
主引用文献Structural Diversity in the Cytoplasmic Region of G Protein-Gated Inward Rectifier K+ Channels
CHANNELS, 1, 2007
2E4G
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RebH with bound L-Trp
分子名称: TRYPTOPHAN, Tryptophan halogenase
著者Blasiak, L.C, Drennan, C.L.
登録日2006-12-07
公開日2007-02-13
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Chlorination by a long-lived intermediate in the mechanism of flavin-dependent halogenases
Biochemistry, 46, 2007
2E4H
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Solution structure of cytoskeletal protein in complex with tubulin tail
分子名称: Restin, Tubulin alpha-ubiquitous chain
著者Mishima, M, Hakoshima, T.
登録日2006-12-08
公開日2007-08-28
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Structural basis for tubulin recognition by cytoplasmic linker protein 170 and its autoinhibition
Proc.Natl.Acad.Sci.Usa, 104, 2007
2E4I
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Human Telomeric DNA mixed-parallel/antiparallel quadruplex under Physiological Ionic Conditions Stabilized by Proper Incorporation of 8-Bromoguanosines
分子名称: DNA (5'-D(*DAP*(BGM)P*DGP*DGP*DTP*DTP*DAP*(BGM)P*DGP*DGP*DTP*DTP*DAP*(BGM)P*(BGM)P*DGP*DTP*DTP*DAP*(BGM)P*DGP*DG)-3')
著者Matsugami, A, Xu, Y, Noguchi, Y, Sugiyama, H, Katahira, M.
登録日2006-12-11
公開日2007-12-11
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Structure of a human telomeric DNA sequence stabilized by 8-bromoguanosine substitutions, as determined by NMR in a K+ solution
Febs J., 274, 2007
2E4J
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Solution Structure of mouse Lipocalin-type Prostaglandin D Synthase
分子名称: Prostaglandin-H2 D-isomerase
著者Shimamoto, S, Ohkubo, T.
登録日2006-12-11
公開日2007-08-21
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution Structure of mouse Lipocalin-type Prostaglandin D Synthase
to be published
2E4L
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Thermodynamic and Structural Analysis of Thermolabile RNase HI from Shewanella oneidensis MR-1
分子名称: Ribonuclease HI
著者Tadokoro, T, You, D.J, Chon, H, Matsumura, H, Koga, Y, Takano, K, Kanaya, S.
登録日2006-12-13
公開日2007-05-01
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural, thermodynamic, and mutational analyses of a psychrotrophic RNase HI.
Biochemistry, 46, 2007

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