Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8P57
DownloadVisualize
BU of 8p57 by Molmil
Crystal structure of the main protease (3CLpro/Mpro) of SARS-CoV-2 obtained in presence of 75 micromolar X77.
分子名称: 1,2-ETHANEDIOL, 3C-like proteinase nsp5, CHLORIDE ION, ...
著者Costanzi, E, Demitri, N, Storici, P.
登録日2023-05-23
公開日2024-05-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Unexpected Single-Ligand Occupancy and Negative Cooperativity in the SARS-CoV-2 Main Protease.
J.Chem.Inf.Model., 64, 2024
8P55
DownloadVisualize
BU of 8p55 by Molmil
Crystal structure of the main protease (3CLpro/Mpro) of SARS-CoV-2 obtained in presence of 75 micromolar MG-132.
分子名称: 1,2-ETHANEDIOL, 3C-like proteinase nsp5, CHLORIDE ION, ...
著者Costanzi, E, Demitri, N, Storici, P.
登録日2023-05-23
公開日2024-05-01
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Unexpected Single-Ligand Occupancy and Negative Cooperativity in the SARS-CoV-2 Main Protease.
J.Chem.Inf.Model., 64, 2024
8P5A
DownloadVisualize
BU of 8p5a by Molmil
Crystal structure of the main protease (3CLpro/Mpro) of SARS-CoV-2 obtained in presence of 5 millimolar X77 enantiomer R.
分子名称: 1,2-ETHANEDIOL, 3C-like proteinase nsp5, CHLORIDE ION, ...
著者Costanzi, E, Demitri, N, Storici, P.
登録日2023-05-23
公開日2024-05-01
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Unexpected Single-Ligand Occupancy and Negative Cooperativity in the SARS-CoV-2 Main Protease.
J.Chem.Inf.Model., 64, 2024
8P87
DownloadVisualize
BU of 8p87 by Molmil
Crystal structure of the main protease (3CLpro/Mpro) of SARS-CoV-2 obtained in presence of 5 mM X77, from an "old" crystal.
分子名称: 1,2-ETHANEDIOL, 3C-like proteinase nsp5, ACETATE ION, ...
著者Costanzi, E, Demitri, N, Storici, P.
登録日2023-05-31
公開日2024-05-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Unexpected Single-Ligand Occupancy and Negative Cooperativity in the SARS-CoV-2 Main Protease.
J.Chem.Inf.Model., 64, 2024
8P5C
DownloadVisualize
BU of 8p5c by Molmil
Crystal structure of the main protease (3CLpro/Mpro) of SARS-CoV-2 obtained in presence of 5 millimolar X77 enantiomer S.
分子名称: 1,2-ETHANEDIOL, 3C-like proteinase nsp5, ACETATE ION, ...
著者Costanzi, E, Demitri, N, Storici, P.
登録日2023-05-23
公開日2024-05-01
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Unexpected Single-Ligand Occupancy and Negative Cooperativity in the SARS-CoV-2 Main Protease.
J.Chem.Inf.Model., 64, 2024
8P56
DownloadVisualize
BU of 8p56 by Molmil
Crystal structure of the main protease (3CLpro/Mpro) of SARS-CoV-2 obtained in presence of 150 micromolar X77.
分子名称: 1,2-ETHANEDIOL, 3C-like proteinase nsp5, CHLORIDE ION, ...
著者Costanzi, E, Demitri, N, Storici, P.
登録日2023-05-23
公開日2024-05-01
実験手法X-RAY DIFFRACTION (1.63 Å)
主引用文献Unexpected Single-Ligand Occupancy and Negative Cooperativity in the SARS-CoV-2 Main Protease.
J.Chem.Inf.Model., 64, 2024
8P54
DownloadVisualize
BU of 8p54 by Molmil
Crystal structure of the main protease (3CLpro/Mpro) of SARS-CoV-2 obtained in presence of 150 micromolar MG-132.
分子名称: 1,2-ETHANEDIOL, 3C-like proteinase nsp5, CHLORIDE ION, ...
著者Costanzi, E, Demitri, N, Storici, P.
登録日2023-05-23
公開日2024-05-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Unexpected Single-Ligand Occupancy and Negative Cooperativity in the SARS-CoV-2 Main Protease.
J.Chem.Inf.Model., 64, 2024
8P5B
DownloadVisualize
BU of 8p5b by Molmil
Crystal structure of the main protease (3CLpro/Mpro) of SARS-CoV-2 obtained in presence of 500 micromolar X77 enantiomer S.
分子名称: 1,2-ETHANEDIOL, 3C-like proteinase nsp5, CHLORIDE ION, ...
著者Costanzi, E, Demitri, N, Storici, P.
登録日2023-05-23
公開日2024-05-01
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Unexpected Single-Ligand Occupancy and Negative Cooperativity in the SARS-CoV-2 Main Protease.
J.Chem.Inf.Model., 64, 2024
8SG6
DownloadVisualize
BU of 8sg6 by Molmil
SARS-CoV-2 Main Protease (Mpro) H163A Mutant Reduced with 20mM TCEP
分子名称: 3C-like proteinase nsp5, GLYCEROL
著者Tran, N, McLeod, M.J, Barwell, S, Kalyaanamoorthy, S, Ganesan, A, Holyoak, T.
登録日2023-04-11
公開日2023-09-27
実験手法X-RAY DIFFRACTION (2.49 Å)
主引用文献The H163A mutation unravels an oxidized conformation of the SARS-CoV-2 main protease.
Nat Commun, 14, 2023
8SPJ
DownloadVisualize
BU of 8spj by Molmil
Crystal Structure of SARS-CoV-2 Main Protease (Mpro) N28T Mutant
分子名称: 3C-like proteinase nsp5
著者Kohaal, N, Lewandowski, E.M, Wang, J, Chen, Y.
登録日2023-05-03
公開日2023-05-24
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Crystal Structure of SARS-CoV-2 Main Protease (Mpro) N28T Mutant
To Be Published
8SK4
DownloadVisualize
BU of 8sk4 by Molmil
Co-structure of SARS-CoV-2 (COVID-19 with covalent pyrazoline based inhibitors)
分子名称: 2-chloro-1-[(5R)-3-phenyl-5-(quinoxalin-5-yl)-4,5-dihydro-1H-pyrazol-1-yl]ethan-1-one, 3C-like proteinase nsp5, IMIDAZOLE
著者Knapp, M.S, Ornelas, E.
登録日2023-04-18
公開日2023-06-07
最終更新日2023-06-14
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Discovery of Potent Pyrazoline-Based Covalent SARS-CoV-2 Main Protease Inhibitors.
Chembiochem, 2023
8SKH
DownloadVisualize
BU of 8skh by Molmil
Co-structure of SARS-CoV-2 (COVID-19 with covalent pyrazoline based inhibitors
分子名称: 2-chloro-1-[(4R,5R)-3,4,5-triphenyl-4,5-dihydro-1H-pyrazol-1-yl]ethan-1-one, 3C-like proteinase nsp5
著者Knapp, M.S, Ornelas, E.
登録日2023-04-19
公開日2023-06-07
最終更新日2023-06-14
実験手法X-RAY DIFFRACTION (1.882 Å)
主引用文献Discovery of Potent Pyrazoline-Based Covalent SARS-CoV-2 Main Protease Inhibitors.
Chembiochem, 24, 2023
8SXO
DownloadVisualize
BU of 8sxo by Molmil
Crystal Structure of SARS-CoV-2 Main Protease (Mpro) H164I Mutant
分子名称: 3C-like proteinase nsp5
著者Kohaal, N, Lewandowski, E.M, Wang, J, Chen, Y.
登録日2023-05-23
公開日2023-06-14
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.76 Å)
主引用文献Crystal Structure of SARS-CoV-2 Main Protease (Mpro) H164I Mutant
To Be Published
8T7Y
DownloadVisualize
BU of 8t7y by Molmil
Structure of SARS CoV-2 main protease in complex with Chymostatin.
分子名称: 3C-like proteinase nsp5, Chymostatin A (bound form)
著者Terzyan, S, Yarla, N, Rao, C.V, Mooers, B.
登録日2023-06-21
公開日2024-06-26
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Structure of SARS CoV-2 main protease in complex with Chymostatin.
to be published
8TPD
DownloadVisualize
BU of 8tpd by Molmil
Synthesis, X-Ray Crystallographic and Biological Activities of Covalent, Non-Peptidic Inhibitors of SARS-CoV-2 Main Protease
分子名称: 3C-like proteinase nsp5, N-[(1R)-2-(benzylamino)-2-oxo-1-(pyridin-3-yl)ethyl]-N-[3-(2-chloroacetamido)phenyl]furan-2-carboxamide
著者Chua, T.K, Song, Y.
登録日2023-08-04
公開日2024-01-24
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.68 Å)
主引用文献Design, Synthesis, X-ray Crystallography, and Biological Activities of Covalent, Non-Peptidic Inhibitors of SARS-CoV-2 Main Protease.
Acs Infect Dis., 10, 2024
1DWE
DownloadVisualize
BU of 1dwe by Molmil
Crystallographic analysis at 3.0-Angstroms resolution of the binding to human thrombin of four active site-directed inhibitors
分子名称: ALPHA-THROMBIN heavy chain, ALPHA-THROMBIN light chain, D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide, ...
著者Banner, D.W, Hadvary, P.
登録日1992-08-19
公開日1994-01-31
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystallographic analysis at 3.0-A resolution of the binding to human thrombin of four active site-directed inhibitors.
J.Biol.Chem., 266, 1991
8TQL
DownloadVisualize
BU of 8tql by Molmil
MPI54 bound to Mpro of SARS-CoV-2
分子名称: 3C-like proteinase nsp5, benzyl [(2S,3S)-3-tert-butoxy-1-({(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}amino)-1-oxobutan-2-yl]carbamate
著者Blankenship, L.R, Liu, W.R.
登録日2023-08-07
公開日2024-08-14
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献MPI54 bound to SARS-CoV-2 Mpro
To Be Published
8TQU
DownloadVisualize
BU of 8tqu by Molmil
MPI51 bound to Mpro of SARS-CoV-2
分子名称: 3C-like proteinase nsp5, UAW247
著者Blankenship, L.R, Liu, W.R.
登録日2023-08-08
公開日2024-08-14
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献MPI51 bound to SARS-CoV-2 Mpro
To Be Published
8TQJ
DownloadVisualize
BU of 8tqj by Molmil
MPI57 bound to Mpro of SARS-CoV-2
分子名称: 3C-like proteinase nsp5, benzyl (1R,2S,5S)-2-({(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}carbamoyl)-6,6-dimethyl-3-azabicyclo[3.1.0]hexane-3-carboxylate
著者Blankenship, L.R, Liu, W.R.
登録日2023-08-07
公開日2024-08-14
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献MPI57 bound to SARS-CoV-2 Mpro
To Be Published
8TQT
DownloadVisualize
BU of 8tqt by Molmil
MPI52 bound to Mpro of SARS-CoV-2
分子名称: (3-chlorophenyl)methyl [(2S)-3-cyclohexyl-1-({(1S,2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]-1-sulfanylpropan-2-yl}amino)-1-oxopropan-2-yl]carbamate, 3C-like proteinase nsp5
著者Blankenship, L.R, Liu, W.R.
登録日2023-08-08
公開日2024-08-14
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献MPI52 bound to SARS-CoV-2 Mpro
To Be Published
8TQH
DownloadVisualize
BU of 8tqh by Molmil
MPI68 bound to Mpro of SARS-CoV-2
分子名称: 3C-like proteinase nsp5, N~2~-[(benzyloxy)carbonyl]-N-{(2R)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-4-methyl-L-leucinamide
著者Blankenship, L.R, Liu, W.R.
登録日2023-08-07
公開日2024-08-14
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献MPI68 bound to SARS-CoV-2 Mpro
To Be Published
8TY3
DownloadVisualize
BU of 8ty3 by Molmil
MI-31 ligand bound to SARS-CoV-2 Mpro
分子名称: (1S,3aR,6aS)-2-[(3,4-dichlorophenoxy)acetyl]-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}octahydrocyclopenta[c]pyrrole-1-carboxamide, 3C-like proteinase nsp5
著者Blankenship, L.R, Liu, W.R.
登録日2023-08-24
公開日2024-08-28
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献MI-31 bound to SARS-CoV-2 Mpro
To Be Published
8TY4
DownloadVisualize
BU of 8ty4 by Molmil
MI-30 bound to Mpro of SARS-CoV-2
分子名称: (1S,3aR,6aS)-2-[(2,4-dichlorophenoxy)acetyl]-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}octahydrocyclopenta[c]pyrrole-1-carboxamide, 3C-like proteinase nsp5
著者Blankenship, L.R, Liu, W.R.
登録日2023-08-24
公開日2024-08-28
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献MI-30 bound to SARS-CoV-2 Mpro
To Be Published
8TY5
DownloadVisualize
BU of 8ty5 by Molmil
MI-14 bound to Mpro of SARS-CoV-2
分子名称: (1R,2S,5S)-3-[(2,4-dichlorophenoxy)acetyl]-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-6,6-dimethyl-3-azabicyclo[3.1.0]hexane-2-carboxamide, 3C-like proteinase nsp5
著者Blankenship, L.R, Liu, W.R.
登録日2023-08-24
公開日2024-08-28
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献MI-14 bound to SARS-CoV-2 Mpro
To Be Published
8U9U
DownloadVisualize
BU of 8u9u by Molmil
Structure of the SARS-CoV-2 main protease in complex with inhibitor MPI98
分子名称: (1R,2S,5S)-3-[bis(4-chlorophenoxy)acetyl]-N-{(2S)-1-hydroxy-3-[(3R)-2-oxo-3,4-dihydro-2H-pyrrol-3-yl]propan-2-yl}-6,6-dimethyl-3-azabicyclo[3.1.0]hexane-2-carboxamide, 3C-like proteinase nsp5
著者Blankenship, L.R, Liu, W.R.
登録日2023-09-20
公開日2024-09-25
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure of the SARS-CoV-2 main protease in complex with inhibitors
To Be Published

226262

件を2024-10-16に公開中

PDB statisticsPDBj update infoContact PDBjnumon