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4HT9
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Crystal structure of E coli Hfq bound to two RNAs
分子名称: Protein hfq, RNA (5'-R(*AP*AP*AP*AP*AP*AP*A)-3'), RNA (5'-R(*AP*UP*UP*UP*UP*UP*UP*A)-3')
著者Wang, W.W, Wang, L.J.
登録日2012-11-01
公開日2013-04-17
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Hfq-bridged ternary complex is important for translation activation of rpoS by DsrA.
Nucleic Acids Res., 41, 2013
3AHU
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BU of 3ahu by Molmil
Crystal structure of YmaH (Hfq) from Bacillus subtilis in complex with an RNA aptamer.
分子名称: 5'-R(*AP*GP*AP*GP*AP*G)-3', Protein hfq
著者Baba, S, Someya, T, Kumasaka, T, Kawai, G, Nakamura, K.
登録日2010-04-29
公開日2011-07-13
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structure of YmaH (Hfq) from Bacillus subtilis in complex with an RNA aptamer.
To be Published
3AO5
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Fragment-based approach to the design of ligands targeting a novel site on HIV-1 integrase
分子名称: 5-(7-bromo-1,3-benzodioxol-5-yl)-1-methyl-1H-pyrazol-3-amine, CADMIUM ION, CHLORIDE ION, ...
著者Wielens, J, Headey, S.J, Parker, M.W, Chalmers, D.K, Scanlon, M.J.
登録日2010-09-21
公開日2011-03-09
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Fragment-based design of ligands targeting a novel site on the integrase enzyme of human immunodeficiency virus 1
Chemmedchem, 6, 2011
2G79
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Crystal Structure of the R132K:Y134F Mutant of Cellular Retinoic Acid Binding Protein Type II in Complex with All-Trans-Retinal at 1.69 Angstroms Resolution
分子名称: Cellular retinoic acid-binding protein 2, RETINAL, SODIUM ION, ...
著者Vaezeslami, S, Geiger, J.H.
登録日2006-02-27
公開日2007-04-17
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.69 Å)
主引用文献Protein design: reengineering cellular retinoic acid binding protein II into a rhodopsin protein mimic.
J.Am.Chem.Soc., 129, 2007
4JW3
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BU of 4jw3 by Molmil
Selection of specific protein binders for pre-defined targets from an optimized library of artificial helicoidal repeat proteins (alphaRep)
分子名称: Alpha-helical artificial proteins, Neocarzinostatin
著者Guellouz, A, Valerio-Lepiniec, M, Urvoas, A, Chevrel, A, Graille, M, Fourati-Kammoun, Z, Desmadril, M, van Tilbeurgh, H, Minard, P.
登録日2013-03-27
公開日2013-09-25
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Selection of Specific Protein Binders for Pre-Defined Targets from an Optimized Library of Artificial Helicoidal Repeat Proteins (alphaRep).
Plos One, 8, 2013
4NNJ
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Crystal structure of Uba1 in complex with ubiquitin-AMP and thioesterified ubiquitin
分子名称: ADENOSINE MONOPHOSPHATE, GLYCEROL, SULFATE ION, ...
著者Schaefer, A, Schindelin, H.
登録日2013-11-18
公開日2014-05-07
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure of the ubiquitin-activating enzyme loaded with two ubiquitin molecules.
Acta Crystallogr.,Sect.D, 70, 2014
4JIY
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BU of 4jiy by Molmil
RNA three-way junction stabilized by a supramolecular di-iron(II) cylinder drug
分子名称: 5'-(CGUACG)-3', FE (II) ION, N-[(1E)-PYRIDIN-2-YLMETHYLENE]-N-[4-(4-{[(1E)-PYRIDIN-2-YLMETHYLENE]AMINO}BENZYL)PHENYL]AMINE
著者Sigel, R.K.O, Schnabl, J.A, Freisinger, E, Spingler, B, Hannon, M.J.
登録日2013-03-07
公開日2013-09-04
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Binding of a designed anti-cancer drug to the central cavity of an RNA three-way junction.
Angew.Chem.Int.Ed.Engl., 52, 2013
3CO5
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Crystal structure of sigma-54 interaction domain of putative transcriptional response regulator from Neisseria gonorrhoeae
分子名称: BETA-MERCAPTOETHANOL, Putative two-component system transcriptional response regulator
著者Osipiuk, J, Hendricks, R, Bigelow, L, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
登録日2008-03-27
公開日2008-04-08
最終更新日2017-10-25
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献X-ray crystal structure of Sigma-54 interaction domain of putative transcriptional response regulator from Neisseria gonorrhoeae.
To be Published
4OZ6
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BU of 4oz6 by Molmil
Structure of the Branched Intermediate in Protein Splicing
分子名称: ALA-MET-ARG-TYR, MAGNESIUM ION, Mxe gyrA intein
著者Bick, M.J, Liu, Z, Frutos, S, Vila-Perello, M, Debelouchina, G.T, Darst, S.A, Muir, T.W.
登録日2014-02-14
公開日2014-05-14
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.786 Å)
主引用文献Structure of the branched intermediate in protein splicing.
Proc.Natl.Acad.Sci.USA, 111, 2014
2F5K
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Crystal structure of the chromo domain of human MRG15
分子名称: Mortality factor 4-like protein 1
著者Zhang, P, Du, J, Ding, J.
登録日2005-11-26
公開日2006-11-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure of human MRG15 chromo domain and its binding to Lys36-methylated histone H3.
Nucleic Acids Res., 34, 2006
4JQI
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BU of 4jqi by Molmil
Structure of active beta-arrestin1 bound to a G protein-coupled receptor phosphopeptide
分子名称: 1,2-ETHANEDIOL, Beta-arrestin-1, CHLORIDE ION, ...
著者Shukla, A.K, Manglik, A, Kruse, A.C, Xiao, K, Reis, R.I, Tseng, W.C, Staus, D.P, Hilger, D, Uysal, S, Huang, L.H, Paduch, M, Shukla, P.T, Koide, A, Koide, S, Weis, W.I, Kossiakoff, A.A, Kobilka, B.K, Lefkowitz, R.J.
登録日2013-03-20
公開日2013-04-17
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of active beta-arrestin-1 bound to a G-protein-coupled receptor phosphopeptide.
Nature, 497, 2013
3CWK
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BU of 3cwk by Molmil
Crystal Structure of the R132K:Y134F:R111L:T54V:L121E Mutant of Cellular Retinoic Acid Binding Protein Type II in Complex with All-trans-Retinoic Acid at 1.57 Angstroms Resolution
分子名称: Cellular retinoic acid-binding protein 2, RETINOIC ACID, SULFATE ION
著者Vaezeslami, S, Geiger, J.H.
登録日2008-04-22
公開日2008-09-09
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structural analysis of site-directed mutants of cellular retinoic acid-binding protein II addresses the relationship between structural integrity and ligand binding.
Acta Crystallogr.,Sect.D, 64, 2008
2GRO
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BU of 2gro by Molmil
Crystal Structure of human RanGAP1-Ubc9-N85Q
分子名称: Ran GTPase-activating protein 1, Ubiquitin-conjugating enzyme E2 I
著者Yunus, A.A, Lima, C.D.
登録日2006-04-24
公開日2006-05-30
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Lysine activation and functional analysis of E2-mediated conjugation in the SUMO pathway.
Nat.Struct.Mol.Biol., 13, 2006
1NGO
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BU of 1ngo by Molmil
NMR Structure of Putative 3' Terminator for B. Anthracis pagA Gene Coding Strand
分子名称: 5'-D(*CP*TP*CP*TP*TP*TP*TP*TP*GP*TP*AP*AP*GP*AP*AP*AP*TP*AP*CP*AP*AP*GP*GP*AP*GP*AP*G)-3'
著者Shiflett, P.R, Taylor-McCabe, K.J, Michalczyk, R, Silks, L.A, Gupta, G.
登録日2002-12-17
公開日2003-06-10
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Structural Studies on the Hairpins at the 3' Untranslated Region of an Anthrax Toxin Gene
Biochemistry, 42, 2003
2CY1
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Crystal structure of APE1850
分子名称: NusA protein homolog
著者Shibata, R, Bessho, Y, Umehara, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-07-04
公開日2006-01-04
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystallization of the archaeal transcription termination factor NusA: a significant decrease in twinning under microgravity conditions
Acta Crystallogr.,Sect.F, 63, 2007
2CQE
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Solution Structure of the Zinc-finger domain in KIAA1064 protein
分子名称: KIAA1064 protein, ZINC ION
著者Someya, T, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-19
公開日2005-11-19
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution Structure of the Zinc-finger domain in KIAA1064 protein
To be Published
2CZY
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BU of 2czy by Molmil
Solution structure of the NRSF/REST-mSin3B PAH1 complex
分子名称: Paired amphipathic helix protein Sin3b, transcription factor REST (version 3)
著者Nomura, M, Uda-Tochio, H, Murai, K, Mori, N, Nishimura, Y.
登録日2005-07-20
公開日2005-12-20
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献The Neural Repressor NRSF/REST Binds the PAH1 Domain of the Sin3 Corepressor by Using its Distinct Short Hydrophobic Helix
J.Mol.Biol., 354, 2005
4JLG
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BU of 4jlg by Molmil
SETD7 in complex with inhibitor (R)-PFI-2 and S-adenosyl-methionine
分子名称: 8-fluoro-N-{(2R)-1-oxo-1-(pyrrolidin-1-yl)-3-[3-(trifluoromethyl)phenyl]propan-2-yl}-1,2,3,4-tetrahydroisoquinoline-6-sulfonamide, Histone-lysine N-methyltransferase SETD7, S-ADENOSYLMETHIONINE, ...
著者Dong, A, Wu, H, Zeng, H, El Bakkouri, M, Barsyte, D, Vedadi, M, Tatlock, J, Owen, D, Bunnage, M, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Brown, P.J, Structural Genomics Consortium (SGC)
登録日2013-03-12
公開日2013-04-17
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.896 Å)
主引用文献(R)-PFI-2 is a potent and selective inhibitor of SETD7 methyltransferase activity in cells.
Proc.Natl.Acad.Sci.USA, 111, 2014
4J5Y
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Crystal structure of Hfq from Pseudomonas aeruginosa in complex with ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, DI(HYDROXYETHYL)ETHER, Protein hfq, ...
著者Murina, V, Lekontseva, N, Nikulin, A.
登録日2013-02-11
公開日2013-07-31
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.0953 Å)
主引用文献Hfq binds ribonucleotides in three different RNA-binding sites.
Acta Crystallogr.,Sect.D, 69, 2013
2GRN
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BU of 2grn by Molmil
Crystal Structure of human RanGAP1-Ubc9
分子名称: Ran GTPase-activating protein 1, Ubiquitin-conjugating enzyme E2 I
著者Yunus, A.A, Lima, C.D.
登録日2006-04-24
公開日2006-05-30
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Lysine activation and functional analysis of E2-mediated conjugation in the SUMO pathway.
Nat.Struct.Mol.Biol., 13, 2006
4I9O
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BU of 4i9o by Molmil
Crystal Structure of GACKIX L664C Tethered to 1-10
分子名称: 1,2-ETHANEDIOL, 1-{4-[4-chloro-3-(trifluoromethyl)phenyl]-4-hydroxypiperidin-1-yl}-3-sulfanylpropan-1-one, CREB-binding protein
著者Wang, N, Meagher, J.L, Stuckey, J.A, Mapp, A.K.
登録日2012-12-05
公開日2013-03-06
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Ordering a dynamic protein via a small-molecule stabilizer.
J.Am.Chem.Soc., 135, 2013
2G78
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Crystal Structure of the R132K:Y134F Mutant of Cellular Retinoic Acid Binding Protein Type II in Complex with All-Trans-Retinoic Acid at 1.70 Angstroms Resolution
分子名称: Cellular retinoic acid-binding protein 2, RETINOIC ACID, SODIUM ION
著者Vaezeslami, S, Geiger, J.H.
登録日2006-02-27
公開日2007-04-17
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Protein design: reengineering cellular retinoic acid binding protein II into a rhodopsin protein mimic.
J.Am.Chem.Soc., 129, 2007
2FYI
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Crystal Structure of the Cofactor-Binding Domain of the Cbl Transcriptional Regulator
分子名称: HTH-type transcriptional regulator cbl
著者Stec, E, Neumann, P, Wilkinson, A.J, Brzozowski, A.M, Bujacz, G.D.
登録日2006-02-08
公開日2006-02-21
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Structural Basis of the Sulphate Starvation Response in E. coli: Crystal Structure and Mutational Analysis of the Cofactor-binding Domain of the Cbl Transcriptional Regulator.
J.Mol.Biol., 364, 2006
2GGF
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Solution structure of the MA3 domain of human Programmed cell death 4
分子名称: Programmed cell death 4, isoform 1
著者Nagata, T, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-03-24
公開日2007-04-24
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the MA3 domain of human Programmed cell death 4
To be Published
2G7B
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Crystal Structure of the R132K:R111L:L121E mutant of Cellular Retinoic Acid Binding Protein Type II In Complex With All-Trans-Retinal At 1.18 Angstroms Resolution
分子名称: ALL-TRANS AXEROPHTHENE, Cellular retinoic acid-binding protein 2, SODIUM ION
著者Vaezeslami, S, Geiger, J.H.
登録日2006-02-27
公開日2007-04-17
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.18 Å)
主引用文献Protein design: reengineering cellular retinoic acid binding protein II into a rhodopsin protein mimic.
J.Am.Chem.Soc., 129, 2007

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