PDB: 224572 件ウェブページステータス検索Chemie searchBIRD

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2D0O	Structure of diol dehydratase-reactivating factor complexed with ADP and Mg2+ 分子名称: ADENOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, SULFATE ION, ... 著者 Shibata, N, Mori, K, Hieda, N, Higuchi, Y, Yamanishi, M, Toraya, T. 登録日 2005-08-05 公開日 2006-02-28 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Release of a damaged cofactor from a coenzyme B12-dependent enzyme: X-ray structures of diol dehydratase-reactivating factor Structure, 13, 2005
2D0P	Structure of diol dehydratase-reactivating factor in nucleotide free form 分子名称: CALCIUM ION, SULFATE ION, diol dehydratase-reactivating factor large subunit, ... 著者 Shibata, N, Mori, K, Hieda, N, Higuchi, Y, Yamanishi, M, Toraya, T. 登録日 2005-08-05 公開日 2006-02-28 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Release of a damaged cofactor from a coenzyme B12-dependent enzyme: X-ray structures of diol dehydratase-reactivating factor Structure, 13, 2005
2D0Q	Complex of Fe-type NHase with Cyclohexyl isocyanide, photo-activated for 1hr at 277K 分子名称: CYCLOHEXYL ISOCYANIDE, FE (III) ION, MAGNESIUM ION, ... 著者 Nojiri, M, Kawano, Y, Hashimoto, K, Kamiya, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2005-08-05 公開日 2006-02-05 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 X-ray snap shots of Inhibitor Binding Process in Photo-reactive Nitrile Hydratase To be Published
2D0S	Crystal structure of the Cytochrome C552 from moderate thermophilic bacterium, hydrogenophilus thermoluteolus 分子名称: HEME C, cytochrome c 著者 Nakamura, S, Ichiki, S.I, Takashima, H, Uchiyama, S, Hasegawa, J, Kobayashi, Y, Sambongi, Y, Ohkubo, T. 登録日 2005-08-08 公開日 2006-05-23 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structure of Cytochrome c552 from a Moderate Thermophilic Bacterium, Hydrogenophilus thermoluteolus: Comparative Study on the Thermostability of Cytochrome c Biochemistry, 45, 2006
2D0T	Crystal structure of 4-phenylimidazole bound form of human indoleamine 2,3-dioxygenase 分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, 4-PHENYL-1H-IMIDAZOLE, Indoleamine 2,3-dioxygenase, ... 著者 Sugimoto, H, Oda, S, Otsuki, T, Hino, T, Yoshida, T, Shiro, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2005-08-08 公開日 2006-01-31 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structure of human indoleamine 2,3-dioxygenase: catalytic mechanism of O2 incorporation by a heme-containing dioxygenase. Proc.Natl.Acad.Sci.Usa, 103, 2006
2D0U	Crystal structure of cyanide bound form of human indoleamine 2,3-dioxygenase 分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, CYANIDE ION, Indoleamine 2,3-dioxygenase, ... 著者 Sugimoto, H, Oda, S, Otsuki, T, Hino, T, Yoshida, T, Shiro, Y, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2005-08-08 公開日 2006-01-31 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 Crystal structure of human indoleamine 2,3-dioxygenase: catalytic mechanism of O2 incorporation by a heme-containing dioxygenase. Proc.Natl.Acad.Sci.Usa, 103, 2006
2D0V	Crystal structure of methanol dehydrogenase from Hyphomicrobium denitrificans 分子名称: CALCIUM ION, PYRROLOQUINOLINE QUINONE, methanol dehydrogenase large subunit, ... 著者 Nojiri, M, Hira, D, Yamaguchi, K, Suzuki, S. 登録日 2005-08-09 公開日 2006-08-09 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.49 Å) 主引用文献 Crystal structures of cytochrome c(L) and methanol dehydrogenase from Hyphomicrobium denitrificans: structural and mechanistic insights into interactions between the two proteins Biochemistry, 45, 2006
2D0W	Crystal structure of cytochrome cL from Hyphomicrobium denitrificans 分子名称: PROTOPORPHYRIN IX CONTAINING FE, ZINC ION, cytochrome cL 著者 Nojiri, M, Hira, D, Yamaguchi, K, Suzuki, S. 登録日 2005-08-10 公開日 2006-08-10 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.98 Å) 主引用文献 Crystal structures of cytochrome c(L) and methanol dehydrogenase from Hyphomicrobium denitrificans: structural and mechanistic insights into interactions between the two proteins Biochemistry, 45, 2006
2D10	Crystal structure of the Radixin FERM domain complexed with the NHERF-1 C-terminal tail peptide 分子名称: Ezrin-radixin-moesin binding phosphoprotein 50, Radixin 著者 Terawaki, S, Maesaki, R, Hakoshima, T. 登録日 2005-08-11 公開日 2006-07-18 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural basis for NHERF recognition by ERM proteins Structure, 14, 2006
2D11	Crystal structure of the Radixin FERM domain complexed with the NHERF-2 C-terminal tail peptide 分子名称: Na(+)/H(+) exchange regulatory cofactor NHE-RF2, Radixin 著者 Terawaki, S, Maesaki, R, Hakoshima, T. 登録日 2005-08-11 公開日 2006-07-18 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.81 Å) 主引用文献 Structural basis for NHERF recognition by ERM proteins Structure, 14, 2006
2D13	Crystal Structure of PH1257 from Pyrococcus horikoshii OT3 分子名称: hypothetical protein PH1257 著者 Lokanath, N.K, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2005-08-12 公開日 2006-02-12 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal Structure of PH1257 from Pyrococcus horikoshii OT3 To be Published
2D16	Crystal Structure of PH1918 protein from Pyrococcus horikoshii OT3 分子名称: GLYCEROL, SODIUM ION, hypothetical protein PH1918 著者 Lokanath, N.K, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2005-08-14 公開日 2006-10-31 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Crystal Structure of PH1918 protein from Pyrococcus horikoshii OT3 To be Published
2D17	Solution RNA structure of stem-bulge-stem region of the HIV-1 dimerization initiation site 分子名称: 5'-R(*CP*GP*GP*CP*AP*AP*GP*AP*GP*GP*CP*GP*AP*CP*CP*C)-3', 5'-R(*GP*GP*GP*UP*CP*GP*GP*CP*UP*UP*GP*CP*UP*G)-3' 著者 Baba, S, Takahashi, K, Noguchi, S, Takaku, H, Koyanagi, Y, Yamamoto, N, Kawai, G. 登録日 2005-08-15 公開日 2005-11-01 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Solution RNA structures of the HIV-1 dimerization initiation site in the kissing-loop and extended-duplex dimers. J.Biochem.(Tokyo), 138, 2005
2D18	Solution RNA structure of loop region of the HIV-1 dimerization initiation site in the extended-duplex dimer 分子名称: 5'-R(*GP*CP*UP*GP*AP*AP*GP*UP*GP*CP*AP*CP*AP*CP*GP*GP*C)-3' 著者 Baba, S, Takahashi, K, Noguchi, S, Takaku, H, Koyanagi, Y, Yamamoto, N, Kawai, G. 登録日 2005-08-15 公開日 2005-11-01 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Solution RNA structures of the HIV-1 dimerization initiation site in the kissing-loop and extended-duplex dimers. J.Biochem.(Tokyo), 138, 2005
2D19	Solution RNA structure of loop region of the HIV-1 dimerization initiation site in the kissing-loop dimer 分子名称: 5'-R(*GP*CP*UP*GP*AP*AP*GP*UP*GP*CP*AP*CP*AP*CP*GP*GP*C)-3' 著者 Baba, S, Takahashi, K, Noguchi, S, Takaku, H, Koyanagi, Y, Yamamoto, N, Kawai, G. 登録日 2005-08-15 公開日 2005-11-01 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Solution RNA structures of the HIV-1 dimerization initiation site in the kissing-loop and extended-duplex dimers. J.Biochem.(Tokyo), 138, 2005
2D1A	Solution RNA structure model of the HIV-1 dimerization initiation site in the extended-duplex dimer 分子名称: RNA 著者 Baba, S, Takahashi, K, Noguchi, S, Takaku, H, Koyanagi, Y, Yamamoto, N, Kawai, G. 登録日 2005-08-15 公開日 2005-11-01 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Solution RNA structures of the HIV-1 dimerization initiation site in the kissing-loop and extended-duplex dimers. J.Biochem.(Tokyo), 138, 2005
2D1B	Solution RNA structure model of the HIV-1 dimerization initiation site in the kissing-loop dimer 分子名称: RNA 著者 Baba, S, Takahashi, K, Noguchi, S, Takaku, H, Koyanagi, Y, Yamamoto, N, Kawai, G. 登録日 2005-08-15 公開日 2005-11-01 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Solution RNA structures of the HIV-1 dimerization initiation site in the kissing-loop and extended-duplex dimers. J.Biochem.(Tokyo), 138, 2005
2D1C	Crystal Structure Of TT0538 protein from Thermus thermophilus HB8 分子名称: CITRIC ACID, Isocitrate dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE 著者 Lokanath, N.K, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2005-08-15 公開日 2006-10-10 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Crystal Structure Of TT0538 protein from Thermus thermophilus HB8 To be Published
2D1E	Crystal structure of PcyA-biliverdin complex 分子名称: BILIVERDINE IX ALPHA, Phycocyanobilin:ferredoxin oxidoreductase, SODIUM ION 著者 Hagiwara, Y, Sugishima, M, Takahashi, Y, Fukuyama, K. 登録日 2005-08-17 公開日 2006-01-24 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.51 Å) 主引用文献 Crystal structure of phycocyanobilin:ferredoxin oxidoreductase in complex with biliverdin IXalpha, a key enzyme in the biosynthesis of phycocyanobilin Proc.Natl.Acad.Sci.Usa, 103, 2006
2D1F	Structure of Mycobacterium tuberculosis threonine synthase 分子名称: PYRIDOXAL-5'-PHOSPHATE, Threonine synthase 著者 Covarrubias, A.S, Bergfors, T, Mannerstedt, K, Oscarson, S, Jones, T.A, Mowbray, S.L, Hogbom, M. 登録日 2005-08-20 公開日 2006-09-05 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural, biochemical, and in vivo investigations of the threonine synthase from Mycobacterium tuberculosis. J.Mol.Biol., 381, 2008
2D1G	Structure of Francisella tularensis Acid Phosphatase A (AcpA) bound to orthovanadate 分子名称: 2-ETHOXYETHANOL, 2-{2-[2-2-(METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, DECAVANADATE, ... 著者 Felts, R.L, Reilly, T.J, Tanner, J.J. 登録日 2005-08-20 公開日 2006-08-15 最終更新日 2017-10-11 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Structure of Francisella tularensis AcpA: prototype of a unique superfamily of acid phosphatases and phospholipases C J.Biol.Chem., 281, 2006
2D1H	Crystal structure of ST1889 protein from thermoacidophilic archaeon Sulfolobus tokodaii 分子名称: 109aa long hypothetical transcriptional regulator 著者 Shinkai, A, Sekine, S, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI) 登録日 2005-08-22 公開日 2006-09-05 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 The putative DNA-binding protein Sto12a from the thermoacidophilic archaeon Sulfolobus tokodaii contains intrachain and interchain disulfide bonds. J.Mol.Biol., 372, 2007
2D1I	Structure of human Atg4b 分子名称: Cysteine protease APG4B 著者 Kumanomidou, T, Mizushima, T, Komatsu, M, Suzuki, A, Tanida, I, Sou, Y.S, Ueno, T, Kominami, E, Tanaka, K, Yamane, T. 登録日 2005-08-24 公開日 2006-01-10 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 The Crystal Structure of Human Atg4b, a Processing and De-conjugating Enzyme for Autophagosome-forming Modifiers J.Mol.Biol., 355, 2006
2D1J	Factor Xa in complex with the inhibitor 2-[[4-[(5-chloroindol-2-yl)sulfonyl]piperazin-1-yl] carbonyl]thieno[3,2-b]pyridine n-oxide 分子名称: 2-({4-[(5-CHLORO-1H-INDOL-2-YL)SULFONYL]PIPERAZIN-1-YL}CARBONYL)THIENO[3,2-B]PYRIDINE 4-OXIDE, CALCIUM ION, Coagulation factor X, ... 著者 Suzuki, M. 登録日 2005-08-24 公開日 2006-08-24 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Design, synthesis, and biological activity of non-basic compounds as factor Xa inhibitors: SAR study of S1 and aryl binding sites. Bioorg.Med.Chem., 13, 2005
2D1K	Ternary complex of the WH2 domain of mim with actin-dnase I 分子名称: ADENOSINE-5'-TRIPHOSPHATE, Actin, alpha skeletal muscle, ... 著者 Chereau, D, Kerff, F, Dominguez, R. 登録日 2005-08-26 公開日 2006-09-12 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structural basis for the actin-binding function of missing-in-metastasis Structure, 15, 2007

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