PDB: 35756 件ウェブページステータス検索Chemie searchBIRD

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3W71	Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with MII-4-097 分子名称: 2,6-dioxo-5-[2-(4-phenylphenyl)ethyl]-1,2,3,6- tetrahydropyrimidine-4-carboxylic acid, COBALT HEXAMMINE(III), Dihydroorotate dehydrogenase (fumarate), ... 著者 Inaoka, D.K, Iida, M, Tabuchi, T, Lee, N, Hashimoto, S, Matsuoka, S, Kuranaga, T, Shiba, T, Sakamoto, K, Suzuki, S, Balogun, E.O, Nara, T, Aoki, T, Inoue, M, Honma, T, Tanaka, A, Harada, S, Kita, K. 登録日 2013-02-27 公開日 2014-03-05 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.68 Å) 主引用文献 Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with MII-4-097 To be Published
3W7G	Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with MII-5-013 分子名称: 5-[2-(2-methoxyphenyl)ethyl]-2,6-dioxo-1,2,3,6-tetrahydropyrimidine-4-carboxylic acid, COBALT HEXAMMINE(III), Dihydroorotate dehydrogenase (fumarate), ... 著者 Inaoka, D.K, Iida, M, Tabuchi, T, Lee, N, Hashimoto, S, Matsuoka, S, Kuranaga, T, Shiba, T, Sakamoto, K, Suzuki, S, Balogun, E.O, Nara, T, Aoki, T, Inoue, M, Honma, T, Tanaka, A, Harada, S, Kita, K. 登録日 2013-02-28 公開日 2014-03-05 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with MII-5-013 To be Published
2DRO	Crystal structure of reducing-end-xylose releasing exo-oligoxylanase D263C mutant 分子名称: GLYCEROL, NICKEL (II) ION, Xylanase Y 著者 Fushinobu, S, Hidaka, M, Honda, Y, Wakagi, T, Shoun, H, Kitaoka, M. 登録日 2006-06-12 公開日 2006-06-27 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structural explanation for the acquisition of glycosynthase activity J.Biochem., 2009
2DQC	Crystal structure of hyhel-10 FV mutant(Hy33f) complexed with hen egg lysozyme 分子名称: Ig VH,anti-lysozyme, Lysozyme C, lysozyme binding Ig kappa chain V23-J2 region 著者 Shiroishi, M, Kondo, H, Tsumoto, K, Kumagai, I. 登録日 2006-05-25 公開日 2007-01-23 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural consequences of mutations in interfacial Tyr residues of a protein antigen-antibody complex. The case of HyHEL-10-HEL J.Biol.Chem., 282, 2007
4I2R	2.15 Angstroms X-ray crystal structure of NAD- and alternative substrate-bound 2-aminomuconate 6-semialdehyde dehydrogenase from Pseudomonas fluorescens 分子名称: (2E,4E)-2-hydroxy-6-oxohexa-2,4-dienoic acid, 2-aminomuconate 6-semialdehyde dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ... 著者 Huo, L, Davis, I, Chen, L, Liu, A. 登録日 2012-11-22 公開日 2014-05-21 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Crystallographic and spectroscopic snapshots reveal a dehydrogenase in action. Nat Commun, 6, 2015
1XPR	Structural mechanism of inhibition of the Rho transcription termination factor by the antibiotic 5a-formylbicyclomycin (FB) 分子名称: 5'-R(*CP*UP*CP*UP*CP*UP*CP*U)-3', 5A-FORMYLBICYCLOMYCIN, MAGNESIUM ION, ... 著者 Skordalakes, E, Brogan, A.P, Park, B.S, Kohn, H, Berger, J.M. 登録日 2004-10-09 公開日 2004-11-02 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (3.15 Å) 主引用文献 Structural mechanism of inhibition of the rho transcription termination factor by the antibiotic bicyclomycin Structure, 13, 2005
4DUC	cytochrome P450 BM3h-2G9 MRI sensor, no ligand 分子名称: PROTOPORPHYRIN IX CONTAINING FE, cytochrome P450 BM3 variant 2G9 著者 Brustad, E.M, Lelyveld, V.S, Snow, C.D, Crook, N, Martinez, F.M, Scholl, T.J, Jasanoff, A, Arnold, F.H. 登録日 2012-02-21 公開日 2012-06-13 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.92 Å) 主引用文献 Structure-guided directed evolution of highly selective p450-based magnetic resonance imaging sensors for dopamine and serotonin. J.Mol.Biol., 422, 2012
3W7W	Crystal structure of E. coli YgjK E727A complexed with 2-O-alpha-D-glucopyranosyl-alpha-D-galactopyranose 分子名称: CALCIUM ION, MAGNESIUM ION, Uncharacterized protein YgjK, ... 著者 Miyazaki, T, Ichikawa, M, Yokoi, G, Kitaoka, M, Mori, H, Kitano, Y, Nishikawa, A, Tonozuka, T. 登録日 2013-03-08 公開日 2013-07-17 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structure of a bacterial glycoside hydrolase family 63 enzyme in complex with its glycosynthase product, and insights into the substrate specificity. Febs J., 280, 2013
2XTH	K2PtBr6 binding to lysozyme 分子名称: HEXABROMOPLATINATE(IV), LYSOZYME C 著者 Helliwell, J.R, Bell, A.M.T, Bryant, P, Fisher, S, Habash, J, Helliwell, M, Margiolaki, I, Kaenket, S, Watier, Y, Wright, J, Yalamanchili, S.K. 登録日 2010-10-07 公開日 2010-12-08 最終更新日 2017-06-28 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Time-Dependent Analysis of K2Ptbr6 Binding to Lysozyme Studied by Protein Powder and Single Crystal X-Ray Analysis Z.Kristallogr., 225, 2010
3W7Q	Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with TT2-5-127 分子名称: 5-{2-[1-(tert-butoxycarbonyl)-2,3-dihydro-1H-indol-5-yl]ethyl}-2,6-dioxo-1,2,3,6-tetrahydropyrimidine-4-carboxylic acid, COBALT HEXAMMINE(III), Dihydroorotate dehydrogenase (fumarate), ... 著者 Inaoka, D.K, Iida, M, Tabuchi, T, Lee, N, Hashimoto, S, Matsuoka, S, Kuranaga, T, Shiba, T, Sakamoto, K, Suzuki, S, Balogun, E.O, Nara, T, Aoki, T, Inoue, M, Honma, T, Tanaka, A, Harada, S, Kita, K. 登録日 2013-03-02 公開日 2014-03-05 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.83 Å) 主引用文献 Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with TT2-5-127 To be Published
2Y53	Crystal structure of E257Q mutant of the box pathway encoded ALDH from Burkholderia xenovorans LB400 分子名称: ALDEHYDE DEHYDROGENASE (BOX PATHWAY), GLYCEROL, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE 著者 Bains, J, Leon, R, Temke, K.G, Boulanger, M.J. 登録日 2011-01-11 公開日 2011-06-01 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Elucidating the Reaction Mechanism of the Benzoate Oxidation Pathway Encoded Aldehyde Dehydrogenase from Burkholderia Xenovorans Lb400. Protein Sci., 20, 2011
3W85	Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with TT2-3-139 分子名称: 5-{2-[3-(methoxycarbonyl)phenyl]ethyl}-2,6-dioxo-1,2,3,6-tetrahydropyrimidine-4-carboxylic acid, COBALT HEXAMMINE(III), Dihydroorotate dehydrogenase (fumarate), ... 著者 Inaoka, D.K, Iida, M, Tabuchi, T, Lee, N, Hashimoto, S, Matsuoka, S, Kuranaga, T, Shiba, T, Sakamoto, K, Suzuki, S, Balogun, E.O, Nara, T, Aoki, T, Inoue, M, Honma, T, Tanaka, A, Harada, S, Kita, K. 登録日 2013-03-12 公開日 2014-03-12 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with TT2-3-139 To be Published
1OXA	CYTOCHROME P450 (DONOR:O2 OXIDOREDUCTASE) 分子名称: 6-DEOXYERYTHRONOLIDE B, CYTOCHROME P450 ERYF, PROTOPORPHYRIN IX CONTAINING FE 著者 Cupp-Vickery, J.R, Poulos, T.L. 登録日 1995-07-14 公開日 1995-12-07 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structure of cytochrome P450eryF involved in erythromycin biosynthesis. Nat.Struct.Biol., 2, 1995
4DYU	The crystal structure of DNA starvation/stationary phase protection protein Dps from Yersinia pestis KIM 10 分子名称: DNA protection during starvation protein, SULFATE ION, ZINC ION 著者 Tan, K, Gu, M, Kwon, K, Anderson, W.F, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2012-02-29 公開日 2012-03-14 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.75 Å) 主引用文献 The crystal structure of DNA starvation/stationary phase protection protein Dps from Yersinia pestis KIM 10 To be Published
1OJ7	STRUCTURAL GENOMICS, UNKNOWN FUNCTION CRYSTAL STRUCTURE OF E. COLI K-12 YQHD 分子名称: 5,6-DIHYDROXY-NADP, BORIC ACID, CHLORIDE ION, ... 著者 Sulzenbacher, G, Perrier, S, Roig-Zamboni, V, Pagot, F, Grisel, S, Salamoni, A, Valencia, C, Bignon, C, Vincentelli, R, Tegoni, M, Cambillau, C. 登録日 2003-07-03 公開日 2004-07-08 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystal Structure of E.Coli Alcohol Dehydrogenase Yqhd: Evidence of a Covalently Modified Nadp Coenzyme J.Mol.Biol., 342, 2004
2XQR	Crystal structure of plant cell wall invertase in complex with a specific protein inhibitor 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ... 著者 Hothorn, M, Van den Ende, W, Lammens, W, Rybin, V, Scheffzek, K. 登録日 2010-09-07 公開日 2010-10-06 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.58 Å) 主引用文献 Structural Insights Into the Ph-Controlled Targeting of Plant Cell-Wall Invertase by a Specific Inhibitor Protein. Proc.Natl.Acad.Sci.USA, 107, 2010
2DDH	Crystal Structure of Acyl-CoA oxidase complexed with 3-OH-dodecanoate 分子名称: (3R)-3-HYDROXYDODECANOIC ACID, Acyl-CoA oxidase, FLAVIN-ADENINE DINUCLEOTIDE 著者 Keiji, T, Nakajima, Y, Miyahara, I, Hirotsu, K. 登録日 2006-01-29 公開日 2006-03-28 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.07 Å) 主引用文献 Three-Dimensional Structure of Rat-Liver Acyl-CoA Oxidase in Complex with a Fatty Acid: Insights into Substrate-Recognition and Reactivity toward Molecular Oxygen. J.Biochem.(Tokyo), 139, 2006
2Y24	STRUCTURAL BASIS FOR SUBSTRATE RECOGNITION BY ERWINIA CHRYSANTHEMI GH5 GLUCURONOXYLANASE 分子名称: 4-O-methyl-alpha-D-glucopyranuronic acid-(1-2)-[beta-D-xylopyranose-(1-4)]beta-D-xylopyranose-(1-4)-beta-D-xylopyranose, IMIDAZOLE, TETRAETHYLENE GLYCOL, ... 著者 Urbanikova, L, Vrsanska, M, Krogh, K.B, Hoff, T, Biely, P. 登録日 2010-12-13 公開日 2011-06-01 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.39 Å) 主引用文献 Structural Basis for Substrate Recognition by Erwinia Chrysanthemi Gh30 Glucuronoxylanase. FEBS J., 278, 2011
3WDU	The complex structure of PtLic16A with cellobiose 分子名称: Beta-1,3-1,4-glucanase, beta-D-glucopyranose, beta-D-glucopyranose-(1-4)-beta-D-glucopyranose 著者 Cheng, Y.S, Huang, C.H, Chen, C.C, Huang, T.Y, Ko, T.P, Huang, J.W, Wu, T.H, Liu, J.R, Guo, R.T. 登録日 2013-06-25 公開日 2014-07-09 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Structural and mutagenetic analyses of a 1,3-1,4-beta-glucanase from Paecilomyces thermophila Biochim.Biophys.Acta, 1844, 2014
2XC1	Full-length Tailspike Protein Mutant Y108W of Bacteriophage P22 分子名称: 2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL, BIFUNCTIONAL TAIL PROTEIN, CALCIUM ION, ... 著者 Mueller, J.J, Seul, A, Seckler, R, Heinemann, U. 登録日 2010-04-15 公開日 2011-05-04 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Bacteriophage P22 Tailspike: Structure of the Complete Protein and Function of the Interdomain Linker Acta Crystallogr.,Sect.D, 70, 2014
3WF1	Crystal structure of human beta-galactosidase in complex with 6S-NBI-GJ 分子名称: (3E,5S,6R,7S,8S,8aS)-3-(butylimino)hexahydro[1,3]thiazolo[3,4-a]pyridine-5,6,7,8-tetrol, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Suzuki, H, Ohto, U, Shimizu, T. 登録日 2013-07-16 公開日 2014-04-23 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structural basis of pharmacological chaperoning for human beta-galactosidase to be published
4DTW	cytochrome P450 BM3h-8C8 MRI sensor bound to serotonin 分子名称: Cytochrome P450 BM3 variant 8C8, MAGNESIUM ION, PROTOPORPHYRIN IX CONTAINING FE, ... 著者 Brustad, E.M, Lelyveld, V.S, Snow, C.D, Crook, N, Martinez, F.M, Scholl, T.J, Jasanoff, A, Arnold, F.H. 登録日 2012-02-21 公開日 2012-06-13 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structure-guided directed evolution of highly selective p450-based magnetic resonance imaging sensors for dopamine and serotonin. J.Mol.Biol., 422, 2012
4DUA	cytochrome P450 BM3h-9D7 MRI sensor, no ligand 分子名称: PROTOPORPHYRIN IX CONTAINING FE, TRIETHYLENE GLYCOL, cytochrome P450 BM3 variant 9D7 著者 Brustad, E.M, Lelyveld, V.S, Snow, C.D, Crook, N, Martinez, F.M, Scholl, T.J, Jasanoff, A, Arnold, F.H. 登録日 2012-02-21 公開日 2012-06-13 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structure-guided directed evolution of highly selective p450-based magnetic resonance imaging sensors for dopamine and serotonin. J.Mol.Biol., 422, 2012
3WX5	Crystal structure of metagenome-derived glycoside hydrolase family 12 endoglucanase 分子名称: Cellulase 著者 Okano, H, Angkawidjaja, C, Kanaya, S. 登録日 2014-07-17 公開日 2014-11-12 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Structure and stability of metagenome-derived glycoside hydrolase family 12 cellulase (LC-CelA) a homolog of Cel12A from Rhodothermus marinus FEBS Open Bio, 4, 2014
4HV1	Laser-induced microfragmentation of lysozyme crystals allows X-ray nanodiffraction characterization of individual domains (lb4) 分子名称: Lysozyme C 著者 Pechkova, E, Belmonte, L, Riekel, C, Popov, D, Koenig, C, Nicolini, C. 登録日 2012-11-05 公開日 2013-11-20 最終更新日 2014-04-16 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Laser-induced microfragmentation of lysozyme crystals allows X-ray nanodiffraction characterization of individual domains To be Published

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