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1WZI
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Structural basis for alteration of cofactor specificity of Malate dehydrogenase from Thermus flavus
分子名称: Malate dehydrogenase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Tomita, T, Fushinobu, S, Kuzuyama, T, Nishiyama, M.
登録日2005-03-05
公開日2006-03-14
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structural basis for alteration of cofactor specificity of malate dehydrogenase from Thermus flavus
to be published
2DFD
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BU of 2dfd by Molmil
Crystal Structure of Human Malate Dehydrogenase Type 2
分子名称: ALANINE, CHLORIDE ION, D-MALATE, ...
著者Ugochukwu, E, Shafqat, N, Rojkova, A, Sundstrom, M, Arrowsmith, C, Weigelt, J, Edwards, A, von Delft, F, Oppermann, U, Structural Genomics Consortium (SGC)
登録日2006-02-28
公開日2006-03-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Crystal Structure of Human Malate Dehydrogenase Type 2
To be Published
4D0Q
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Hyaluronan Binding Module of the Streptococcal Pneumoniae Hyaluronate Lyase
分子名称: 1,2-ETHANEDIOL, HYALURONATE LYASE
著者Suits, M.D.L, Pluvinage, B, Law, A, Liu, Y, Palma, A.S, Chai, W, Feizi, T, Boraston, A.B.
登録日2014-04-29
公開日2014-08-06
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Conformational Analysis of the Streptococcus Pneumoniae Hyaluronate Lyase and Characterization of its Hyaluronan-Specific Carbohydrate-Binding Module.
J.Biol.Chem., 289, 2014
2DRS
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BU of 2drs by Molmil
Crystal structure of reducing-end-xylose releasing exo-oligoxylanase D263S mutant
分子名称: GLYCEROL, NICKEL (II) ION, Xylanase Y
著者Fushinobu, S, Hidaka, M, Honda, Y, Wakagi, T, Shoun, H, Kitaoka, M.
登録日2006-06-12
公開日2006-06-27
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural explanation for the acquisition of glycosynthase activity
J.Biochem., 2009
2ZUI
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BU of 2zui by Molmil
Crystal Structure of Camphor-soaked Ferric Cytochrome P450cam Mutant (D297N)
分子名称: CAMPHOR, Camphor 5-monooxygenase, POTASSIUM ION, ...
著者Sakurai, K, Harada, K, Shimada, H, Shimokata, K, Hayashi, T, Tsukihara, T.
登録日2008-10-18
公開日2009-10-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Crystal Structure of Camphor-soaked Ferric Cytochrome P450cam Mutant
TO BE PUBLISHED
4HP8
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Crystal structure of a putative 2-deoxy-d-gluconate 3-dehydrogenase from Agrobacterium Tumefaciens (target EFI-506435) with bound NADP
分子名称: 2-deoxy-D-gluconate 3-dehydrogenase, ACETATE ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
著者Vetting, M.W, Bouvier, J.T, Groninger-Poe, F, Morisco, L.L, Wasserman, S.R, Sojitra, S, Imker, H.J, Gerlt, J.A, Almo, S.C, Enzyme Function Initiative (EFI)
登録日2012-10-23
公開日2012-11-07
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Crystal structure of a putative 2-deoxy-d-gluconate 3-dehydrogenase from Agrobacterium Tumefaciens (target EFI-506435) with bound NADP
To be Published
1ORV
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BU of 1orv by Molmil
Crystal Structure of Porcine Dipeptidyl Peptidase IV (CD26)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, SULFATE ION, ...
著者Engel, M, Hoffmann, T, Wagner, L, Wermann, M, Heiser, U, Kiefersauer, R, Huber, R, Bode, W, Demuth, H.U, Brandstetter, H.
登録日2003-03-16
公開日2003-05-06
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The Crystal Structure of Dipeptidyl Peptidase IV (CD26) Reveals its Functional Regulation and Enzymatic Mechanism
Proc.Natl.Acad.Sci.USA, 100, 2003
2DVM
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BU of 2dvm by Molmil
NAD complex structure of PH1275 protein from Pyrococcus horikoshii
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 439aa long hypothetical malate oxidoreductase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE
著者Lokanath, N.K, Mizutani, H, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-07-31
公開日2007-10-02
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献NAD complex structure of PH1275 protein from Pyrococcus horikoshii
To be Published
4CYA
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BU of 4cya by Molmil
DpsA15 from Streptomyces coelicolor
分子名称: DPSA15
著者Townsend, P.D, Hitchings, M.D, Del Sol, R, Pohl, E.
登録日2014-04-10
公開日2014-06-25
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献A Tale of Tails: Deciphering the Contribution of Terminal Tails to the Biochemical Properties of Two Dps Proteins from Streptomyces Coelicolor
Cell.Mol.Life Sci., 71, 2014
1WDQ
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BU of 1wdq by Molmil
The role of an inner loop in the catalytic mechanism of soybean beta-amylase
分子名称: Beta-amylase, SULFATE ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
著者Kang, Y.N, Adachi, M, Utsumi, S, Mikami, B.
登録日2004-05-17
公開日2005-04-05
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.28 Å)
主引用文献Structural analysis of threonine 342 mutants of soybean beta-amylase: role of a conformational change of the inner loop in the catalytic mechanism.
Biochemistry, 44, 2005
1OUE
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CONTRIBUTION OF HYDROPHOBIC RESIDUES TO THE STABILITY OF HUMAN LYSOZYME: X-RAY STRUCTURE OF THE V125A MUTANT
分子名称: LYSOZYME, SODIUM ION
著者Takano, K, Yamagata, Y, Fujii, S, Yutani, K.
登録日1996-08-23
公開日1997-02-12
最終更新日2021-11-03
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Contribution of the hydrophobic effect to the stability of human lysozyme: calorimetric studies and X-ray structural analyses of the nine valine to alanine mutants.
Biochemistry, 36, 1997
3VD5
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BU of 3vd5 by Molmil
E. coli (lacZ) beta-galactosidase (N460S)
分子名称: Beta-galactosidase, DIMETHYL SULFOXIDE, MAGNESIUM ION, ...
著者Wheatley, R.W, Kappelhoff, J.C, Hahn, J.N, Dugdale, M.L, Dutkoski, M.J, Tamman, S.D, Fraser, M.E, Huber, R.E.
登録日2012-01-04
公開日2012-04-11
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Substitution for Asn460 cripples {beta}-galactosidase (Escherichia coli) by increasing substrate affinity and decreasing transition state stability.
Arch.Biochem.Biophys., 521, 2012
1WGB
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BU of 1wgb by Molmil
Crystal structure of a probable flavoprotein from Thermus thermophilus HB8
分子名称: probable flavoprotein
著者Imagawa, T, Tsuge, H, Utsunomiya, H, Yokoyama, S, Kuramitsu, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-05-28
公開日2004-11-28
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of a probable flavoprotein from Thermus thermophilus HB8
To be Published
1WS9
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Crystal structure of project ID TT0172 from Thermus thermophilus HB8
分子名称: acyl-CoA dehydrogenase
著者Shimizu, K, Kunishima, N, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2004-11-02
公開日2005-10-18
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of project ID TT0172 from Thermus thermophilus HB8
To be Published
4HMN
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BU of 4hmn by Molmil
Crystal structure of human 17beta-hydroxysteroid dehydrogenase type 5 in complex with (4-(4-Chlorophenyl)piperazin-1-yl)(morpholino)methanone (24)
分子名称: 1,2-ETHANEDIOL, Aldo-keto reductase family 1 member C3, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Turnbull, A.P, Flanagan, J.U, Atwell, G.J, Heinrich, D.M, Jamieson, S.M.F, Brooke, D.G, Silva, S, Rigoreau, L.J.M, Trivier, E, Soudy, C, Samlal, S.S, Owen, P.J, Schroeder, E, Raynham, T, Denny, W.A.
登録日2012-10-18
公開日2013-11-13
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Morpholylureas are a new class of potent and selective inhibitors of the type 5 17-beta-hydroxysteroid dehydrogenase (AKR1C3).
Bioorg.Med.Chem., 22, 2014
4HMT
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BU of 4hmt by Molmil
Crystal structure of PhzG from Pseudomonas fluorescens 2-79 in complex with hexahydrophenazine-1,6-dicarboxylic acid
分子名称: (1R,5aS,6R)-1,2,5,5a,6,7-hexahydrophenazine-1,6-dicarboxylic acid, FLAVIN MONONUCLEOTIDE, Phenazine biosynthesis protein phzG, ...
著者Xu, N.N, Ahuja, E.G, Blankenfeldt, W.
登録日2012-10-18
公開日2013-08-07
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.42 Å)
主引用文献Trapped intermediates in crystals of the FMN-dependent oxidase PhzG provide insight into the final steps of phenazine biosynthesis
Acta Crystallogr.,Sect.D, 69, 2013
1WTN
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The structure of HEW Lysozyme Orthorhombic Crystal Growth under a High Magnetic Field
分子名称: CHLORIDE ION, Lysozyme C
著者Saijo, S, Yamada, Y, Sato, T, Tanaka, N, Matsui, T, Sazaki, G, Nakajima, K, Matsuura, Y.
登録日2004-11-25
公開日2004-12-14
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.13 Å)
主引用文献Structural consequences of hen egg-white lysozyme orthorhombic crystal growth in a high magnetic field: validation of X-ray diffraction intensity, conformational energy searching and quantitative analysis of B factors and mosaicity.
Acta Crystallogr.,Sect.D, 61, 2005
2DGD
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BU of 2dgd by Molmil
Crystal structure of ST0656, a function unknown protein from Sulfolobus tokodaii
分子名称: 223aa long hypothetical arylmalonate decarboxylase, GLYCEROL
著者Tanaka, Y, Sasaki, T, Tanabe, E, Yao, M, Tanaka, I, Kumagai, I, Tsumoto, K.
登録日2006-03-10
公開日2007-03-13
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structure of ST0656, a function unknown protein from Sulfolobus tokodaii
To be Published
1WU6
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BU of 1wu6 by Molmil
Crystal structure of reducing-end-xylose releasing exo-oligoxylanase E70A mutant complexed with xylobiose
分子名称: GLYCEROL, NICKEL (II) ION, beta-D-xylopyranose-(1-4)-beta-D-xylopyranose, ...
著者Fushinobu, S, Hidaka, M, Honda, Y, Wakagi, T, Shoun, H, Kitaoka, M.
登録日2004-12-01
公開日2005-02-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Structural Basis for the Specificity of the Reducing End Xylose-releasing Exo-oligoxylanase from Bacillus halodurans C-125
J.Biol.Chem., 280, 2005
2ZYC
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Crystal structure of peptidoglycan hydrolase from Sphingomonas sp. A1
分子名称: PHOSPHATE ION, Peptidoglycan hydrolase FlgJ
著者Ochiai, A, Mikami, B, Hashimoto, W, Murata, K.
登録日2009-01-19
公開日2009-02-03
最終更新日2024-05-29
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Crystal structure of the glycosidase family 73 peptidoglycan hydrolase FlgJ
Biochem.Biophys.Res.Commun., 381, 2009
3VIK
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BU of 3vik by Molmil
Crystal structure of beta-glucosidase from termite Neotermes koshunensis in complex with cellobiose
分子名称: 1,2-ETHANEDIOL, Beta-glucosidase, CHLORIDE ION, ...
著者Jeng, W.Y, Liu, C.I, Wang, A.H.J.
登録日2011-10-03
公開日2012-07-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献High-resolution structures of Neotermes koshunensis beta-glucosidase mutants provide insights into the catalytic mechanism and the synthesis of glucoconjugates
Acta Crystallogr.,Sect.D, 68, 2012
2DFC
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Xylanase II from Tricoderma reesei at 293K
分子名称: Endo-1,4-beta-xylanase 2, IODIDE ION
著者Harata, K, Akiba, T.
登録日2006-02-28
公開日2006-07-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.19 Å)
主引用文献Structure of an orthorhombic form of xylanase II from Trichoderma reesei and analysis of thermal displacement.
ACTA CRYSTALLOGR.,SECT.D, 62, 2006
1WV4
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BU of 1wv4 by Molmil
X-ray Structure of Escherichia coli pyridoxine 5'-phosphate oxidase in tetragonal crystal form
分子名称: FLAVIN MONONUCLEOTIDE, PHOSPHATE ION, Pyridoxamine 5'-phosphate oxidase
著者Safo, M.K, Musayev, F.N, Schirch, V.
登録日2004-12-11
公開日2004-12-28
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Structure of Escherichia coli pyridoxine 5'-phosphate oxidase in a tetragonal crystal form: insights into the mechanistic pathway of the enzyme.
Acta Crystallogr.,Sect.D, 61, 2005
2DFL
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BU of 2dfl by Molmil
Crystal structure of left-handed RadA filament
分子名称: DNA repair and recombination protein radA
著者Chen, L.T, Ko, T.P, Wang, T.F, Wang, A.H.J.
登録日2006-03-02
公開日2007-01-23
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Crystal structure of the left-handed archaeal RadA helical filament: identification of a functional motif for controlling quaternary structures and enzymatic functions of RecA family proteins
Nucleic Acids Res., 35, 2007
1P36
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T4 LYOSZYME CORE REPACKING MUTANT I100V/TA
分子名称: BETA-MERCAPTOETHANOL, CHLORIDE ION, LYSOZYME, ...
著者Mooers, B.H, Datta, D, Baase, W.A, Zollars, E.S, Mayo, S.L, Matthews, B.W.
登録日2003-04-16
公開日2003-10-07
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献Repacking the Core of T4 lysozyme by automated design
J.Mol.Biol., 332, 2003

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