PDB: 42250 件ウェブページステータス検索Chemie searchBIRD

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8G87	Human Oct4 bound to nucleosome with human nMatn1 sequence (focused refinement of Oct4 bound region) 分子名称: POU domain, class 5, transcription factor 1, ... 著者 Sinha, K.K, Bilokapic, S, Du, Y, Malik, D, Halic, M. 登録日 2023-02-17 公開日 2023-03-22 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (8.1 Å) 主引用文献 Histone modifications regulate pioneer transcription factor cooperativity. Nature, 619, 2023
8G88	Human Oct4 bound to nucleosome with human nMatn1 sequence 分子名称: Histone H2A, Histone H2B, Histone H3, ... 著者 Sinha, K.K, Bilokapic, S, Du, Y, Malik, D, Halic, M. 登録日 2023-02-17 公開日 2023-03-22 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (2.3 Å) 主引用文献 Histone modifications regulate pioneer transcription factor cooperativity. Nature, 619, 2023
8G8E	Human Oct4 bound to nucleosome with human LIN28B sequence 分子名称: LIN28B DNA (32-MER), POU domain, class 5, ... 著者 Sinha, K.K, Bilokapic, S, Du, Y, Malik, D, Halic, M. 登録日 2023-02-17 公開日 2023-03-22 最終更新日 2024-06-19 実験手法 ELECTRON MICROSCOPY (3.9 Å) 主引用文献 Histone modifications regulate pioneer transcription factor cooperativity. Nature, 619, 2023
8TB9	PRC2-J119-450 monomer bound to H1-nucleosome 分子名称: DNA (226-MER), Histone H1.0, Histone H2A type 1, ... 著者 Sauer, P.V, Cookis, T, Pavlenko, E, Nogales, E, Poepsel, S. 登録日 2023-06-28 公開日 2024-09-25 最終更新日 2024-11-06 実験手法 ELECTRON MICROSCOPY (4 Å) 主引用文献 Activation of automethylated PRC2 by dimerization on chromatin. Mol.Cell, 84, 2024
3VAS	Adenosine kinase from Schistosoma mansoni in complex with adenosine in occluded loop conformation 分子名称: ADENOSINE, CHLORIDE ION, Putative adenosine kinase 著者 Romanello, L, Bachega, F.R, Garatt, R.C, DeMarco, R, Brandao-neto, J, Pereira, H.M. 登録日 2011-12-29 公開日 2012-11-14 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.26 Å) 主引用文献 Adenosine kinase from Schistosoma mansoni: structural basis for the differential incorporation of nucleoside analogues. Acta Crystallogr.,Sect.D, 69, 2013
3UQ6	Adenosine kinase from Schistosoma mansoni in complex with adenosine and AMP 分子名称: ADENOSINE, ADENOSINE MONOPHOSPHATE, Adenosine kinase, ... 著者 Romanello, L, Cassago, A, Bachega, F.R, Garatt, R.C, DeMarco, R, Pereira, H.M. 登録日 2011-11-19 公開日 2012-10-31 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Adenosine kinase from Schistosoma mansoni: structural basis for the differential incorporation of nucleoside analogues. Acta Crystallogr.,Sect.D, 69, 2013
6TOE	Imine Reductase from Myxococcus stipitatus V8 variant in complex with NAD+ 分子名称: Coenzyme F420-dependent NADP oxidoreductase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE 著者 Sharma, M, Nestl, B, Grogan, G. 登録日 2019-12-11 公開日 2020-12-09 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.78 Å) 主引用文献 Inverting the Stereoselectivity of an NADH-Dependent Imine-Reductase Variant Chemcatchem, 2021
6TO4	Imine Reductase from Myxococcus stipitatus in complex with NADP+ 分子名称: Coenzyme F420-dependent NADP oxidoreductase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE 著者 Sharma, M, Nestl, B, Grogan, G. 登録日 2019-12-11 公開日 2020-12-09 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.29 Å) 主引用文献 Inverting the Stereoselectivity of an NADH-Dependent Imine-Reductase Variant Chemcatchem, 2021
6TR8	Corynebacterium diphtheriae methionine sulfoxide reductase B (MsrB) solution structure - reduced form 分子名称: Peptide-methionine (R)-S-oxide reductase, ZINC ION 著者 Volkov, A.N, Tossounian, M.A, Buts, L, Messens, J. 登録日 2019-12-18 公開日 2020-02-05 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Methionine sulfoxide reductase B fromCorynebacterium diphtheriaecatalyzes sulfoxide reduction via an intramolecular disulfide cascade. J.Biol.Chem., 295, 2020
8OIR	55S human mitochondrial ribosome with mtRF1 and P-site tRNA 分子名称: 12S rRNA, 16S rRNA, 28S ribosomal protein S10, ... 著者 Saurer, M, Leibundgut, M, Scaiola, A, Schoenhut, T, Ban, N. 登録日 2023-03-23 公開日 2023-06-14 最終更新日 2024-06-26 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Molecular basis of translation termination at noncanonical stop codons in human mitochondria. Science, 380, 2023
8OIN	55S mammalian mitochondrial ribosome with mtRF1 and P-site tRNA 分子名称: 12S rRNA, 16S rRNA, 28S ribosomal protein S15, ... 著者 Saurer, M, Leibundgut, M, Scaiola, A, Schoenhut, T, Ban, N. 登録日 2023-03-23 公開日 2023-06-14 最終更新日 2024-06-26 実験手法 ELECTRON MICROSCOPY (3.6 Å) 主引用文献 Molecular basis of translation termination at noncanonical stop codons in human mitochondria. Science, 380, 2023
1KRM	Crystal structure of bovine adenosine deaminase complexed with 6-hydroxyl-1,6-dihydropurine riboside 分子名称: 6-HYDROXY-1,6-DIHYDRO PURINE NUCLEOSIDE, ZINC ION, adenosine deaminase 著者 Kinoshita, T. 登録日 2002-01-10 公開日 2003-01-14 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structure of bovine adenosine deaminase complexed with 6-hydroxy-1,6-dihydropurine riboside. Acta Crystallogr.,Sect.D, 59, 2003
8ANM	Structure of the amyloid-forming peptide LYIQWL from Tc5b, grown from water 分子名称: Peptide LYIQWL from Tc5b 著者 Durvanger, Z. 登録日 2022-08-05 公開日 2023-08-02 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (0.9 Å) 主引用文献 Polymorphic amyloid nanostructures of hormone peptides involved in glucose homeostasis display reversible amyloid formation. Nat Commun, 14, 2023
8ANN	Structure of the amyloid-forming peptide LFIEWL from exendin-4, grown from acetonitrile / water 分子名称: Peptide LFIEWL from exendin-4 著者 Durvanger, Z. 登録日 2022-08-05 公開日 2023-08-02 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (1.24 Å) 主引用文献 Polymorphic amyloid nanostructures of hormone peptides involved in glucose homeostasis display reversible amyloid formation. Nat Commun, 14, 2023
8ANL	Structure of the amyloid-forming peptide LFIEWL from exendin-4, grown from water 分子名称: Peptide LFIEWL from exendin-4 著者 Durvanger, Z. 登録日 2022-08-05 公開日 2023-08-02 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Polymorphic amyloid nanostructures of hormone peptides involved in glucose homeostasis display reversible amyloid formation. Nat Commun, 14, 2023
8ANI	Structure of the amyloid-forming peptide LYIQWL from Tc5b, grown from 10% ethanol 分子名称: ETHANOL, Peptide LYIQWL from Tc5b, trifluoroacetic acid 著者 Durvanger, Z. 登録日 2022-08-05 公開日 2023-08-02 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 Polymorphic amyloid nanostructures of hormone peptides involved in glucose homeostasis display reversible amyloid formation. Nat Commun, 14, 2023
8ANG	Structure of the amyloid-forming peptide LYIQWL from Tc5b, grown from 30% ethanol 分子名称: ETHANOL, Peptide LYIQWL from Tc5b 著者 Durvanger, Z. 登録日 2022-08-05 公開日 2023-08-02 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Polymorphic amyloid nanostructures of hormone peptides involved in glucose homeostasis display reversible amyloid formation. Nat Commun, 14, 2023
8ANJ	Structure of the amyloid-forming peptide DFINWL from human GLP-2 分子名称: Peptide DFINWL from human GLP-2 著者 Durvanger, Z. 登録日 2022-08-05 公開日 2023-08-02 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Polymorphic amyloid nanostructures of hormone peptides involved in glucose homeostasis display reversible amyloid formation. Nat Commun, 14, 2023
8ANK	Structure of the amyloid-forming peptide pEFIAWL from human GLP-1 分子名称: Peptide pEFIAWL from hGLP-1 著者 Durvanger, Z. 登録日 2022-08-05 公開日 2023-08-02 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Polymorphic amyloid nanostructures of hormone peptides involved in glucose homeostasis display reversible amyloid formation. Nat Commun, 14, 2023
8ANH	Structure of the amyloid-forming peptide LYIQWL from Tc5b, grown from 30% acetonitrile 分子名称: ACETONITRILE, Peptide LYIQWL from Tc5b, trifluoroacetic acid 著者 Durvanger, Z. 登録日 2022-08-05 公開日 2023-08-02 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (1.25 Å) 主引用文献 Polymorphic amyloid nanostructures of hormone peptides involved in glucose homeostasis display reversible amyloid formation. Nat Commun, 14, 2023
8BF5	Early transcription elongation state of influenza A/H7N9 polymerase stalled with incoming GTP analogue 分子名称: 3' vRNA, 5' vRNA, MAGNESIUM ION, ... 著者 Cusack, S, Kouba, T. 登録日 2022-10-24 公開日 2022-12-28 最終更新日 2025-07-09 実験手法 ELECTRON MICROSCOPY (2.96 Å) 主引用文献 Direct observation of backtracking by influenza A and B polymerases upon consecutive incorporation of the nucleoside analog T1106. Cell Rep, 42, 2023
9GRH	Crystal structure of the C-terminal phosphatase domain from Saccharomyces cerevisiae Vip1 (apo) 分子名称: Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase, ZINC ION 著者 Raia, P, Lee, K, Hothorn, M. 登録日 2024-09-11 公開日 2025-02-26 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 A small signaling domain controls PPIP5K phosphatase activity in phosphate homeostasis. Nat Commun, 16, 2025
9GRN	Crystal structure of the engineered C-terminal phosphatase domain from Saccharomyces cerevisiae Vip1 (apo, loop deletion residues 848-918) 分子名称: ACETATE ION, GLYCEROL, Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase, ... 著者 Raia, P, Lee, K, Hothorn, M. 登録日 2024-09-11 公開日 2025-02-26 実験手法 X-RAY DIFFRACTION (3.4 Å) 主引用文献 A small signaling domain controls PPIP5K phosphatase activity in phosphate homeostasis. Nat Commun, 16, 2025
9GRO	Crystal structure of the engineered C-terminal phosphatase domain from Saccharomyces cerevisiae Vip1 in complex with 1,5-InsP8 (phosphatase dead mutant, loop deletion residues 848-918) 分子名称: (1R,3S,4R,5S,6R)-2,4,5,6-tetrakis(phosphonooxy)cyclohexane-1,3-diyl bis[trihydrogen (diphosphate)], (2S)-hexane-1,2,6-triol, 1,2-ETHANEDIOL, ... 著者 Raia, P, Hothorn, M. 登録日 2024-09-11 公開日 2025-02-26 実験手法 X-RAY DIFFRACTION (2.36 Å) 主引用文献 A small signaling domain controls PPIP5K phosphatase activity in phosphate homeostasis. Nat Commun, 16, 2025
9GR8	Crystal structure of the N-terminal kinase domain from Saccharomyces cerevisiae Vip1 in complex with ADP. 分子名称: 1,2-ETHANEDIOL, ADENOSINE-5'-DIPHOSPHATE, Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 著者 Lee, K, Raia, P, Hothorn, M. 登録日 2024-09-11 公開日 2025-02-26 実験手法 X-RAY DIFFRACTION (1.18 Å) 主引用文献 A small signaling domain controls PPIP5K phosphatase activity in phosphate homeostasis. Nat Commun, 16, 2025

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