PDB: 47120 件ウェブページステータス検索Chemie searchBIRD

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2YCQ	Crystal structure of checkpoint kinase 2 in complex with inhibitor PV1115 分子名称: N-{4-[(1E)-N-1H-IMIDAZOL-2-YLETHANEHYDRAZONOYL]PHENYL}-7-NITRO-1H-INDOLE-2-CARBOXAMIDE, NITRATE ION, SERINE/THREONINE-PROTEIN KINASE CHK2 著者 Lountos, G.T, Jobson, A.G, Tropea, J.E, Self, C.R, Pommier, Y, Shoemaker, R.H, Zhang, G, Waugh, D.S. 登録日 2011-03-16 公開日 2011-11-16 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Structural Characterization of Inhibitor Complexes with Checkpoint Kinase 2 (Chk2), a Drug Target for Cancer Therapy. J.Struct.Biol., 176, 2011
7QKD	Crystal structure of human Cathepsin L in complex with covalently bound MG132 分子名称: ACETATE ION, Cathepsin L, DI(HYDROXYETHYL)ETHER, ... 著者 Reinke, P.Y.A, Falke, S, Lieske, J, Ewert, W, Loboda, J, Rahmani Mashhour, A, Hauser, M, Karnicar, K, Usenik, A, Lindic, N, Lach, M, Boehler, H, Beck, T, Cox, R, Chapman, H.N, Hinrichs, W, Turk, D, Guenther, S, Meents, A. 登録日 2021-12-17 公開日 2022-12-28 最終更新日 2024-05-15 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Structural Elucidation and Antiviral Activity of Covalent Cathepsin L Inhibitors. J.Med.Chem., 2024
7BP2	Structural mechanism directing nucleosome reorganization by NAP1-RELATED PROTEIN 1 (NRP1) 分子名称: GLYCEROL, Histone H2A.6, Histone H2B.1, ... 著者 Luo, Q, Baihui, W. 登録日 2020-03-21 公開日 2020-11-11 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.58 Å) 主引用文献 NAP1-Related Protein 1 (NRP1) has multiple interaction modes for chaperoning histones H2A-H2B. Proc.Natl.Acad.Sci.USA, 117, 2020
2I6R	Crystal structure of E. coli HypE, a hydrogenase maturation protein 分子名称: HypE protein 著者 Rangarajan, E.S, Proteau, A, Iannuzzi, P, Matte, A, Cygler, M, Montreal-Kingston Bacterial Structural Genomics Initiative (BSGI) 登録日 2006-08-29 公開日 2007-10-23 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.51 Å) 主引用文献 Structure of [NiFe] hydrogenase maturation protein HypE from Escherichia coli and its interaction with HypF. J.Bacteriol., 190, 2008
2NAF	Solution structure of peptidyl-tRNA hydrolase from Mycobacterium smegmatis 分子名称: Peptidyl-tRNA hydrolase 著者 Yadav, R, Pathak, P, Fatma, F, Kabra, A, Pulavarti, S, Jain, A, Kumar, A, Shukla, V, Arora, A. 登録日 2015-12-23 公開日 2017-01-11 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Structural characterization of peptidyl-tRNA hydrolase from Mycobacterium smegmatis by NMR spectroscopy. Biochim.Biophys.Acta, 1864, 2016
2I7R	conserved domain protein 分子名称: Conserved domain protein 著者 Duke, N.E.C, Zhou, M, Abdullah, J, Joachimiak, A, Midwest Center for Structural Genomics (MCSG) 登録日 2006-08-31 公開日 2006-10-17 最終更新日 2017-10-18 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 conserved domain protein To be Published
2N92	Solution structure of cecropin P1 with LPS 分子名称: Cecropin-P1 著者 Baek, M, Kamiya, M, Kushibiki, T, Nakazumi, T, Tomisawa, S, Abe, C, Kumaki, Y, Kikukawa, T, Demura, M, Kawano, K, Aizawa, T. 登録日 2015-11-04 公開日 2016-11-09 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Lipopolysaccharide bound structure of antimicrobial peptide cecropin P1 by NMR spectroscopy To be Published
8PKS	Low resolution crystal structure of Keap1-456, a repeat fragment from the human Keap1 beta-propeller 分子名称: Kelch-like ECH-associated protein 1 著者 Wouters, S.M.L. 登録日 2023-06-27 公開日 2024-07-10 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Fragment-based assembly of a symmetric protein scaffold To Be Published
7LHR	Crystal structure of adenosine-5'-phosphosulfate reductase from Mycobacterium tuberculosis 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, IRON/SULFUR CLUSTER, Phosphoadenosine phosphosulfate reductase 著者 Feliciano, P.R, Drennan, C.L. 登録日 2021-01-26 公開日 2021-07-07 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (3.11 Å) 主引用文献 Crystal Structure of the [4Fe-4S] Cluster-Containing Adenosine-5'-phosphosulfate Reductase from Mycobacterium tuberculosis . Acs Omega, 6, 2021
7LHU	Crystal structure of adenosine-5'-phosphosulfate reductase from Mycobacterium tuberculosis in a complex with product AMP 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ADENOSINE MONOPHOSPHATE, IRON/SULFUR CLUSTER, ... 著者 Feliciano, P.R, Drennan, C.L. 登録日 2021-01-26 公開日 2021-07-07 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (3.09 Å) 主引用文献 Crystal Structure of the [4Fe-4S] Cluster-Containing Adenosine-5'-phosphosulfate Reductase from Mycobacterium tuberculosis . Acs Omega, 6, 2021
2NCO	NMR solution structure for the C-terminal domain of Tetrahymena Tcb2 in the absence of calcium 分子名称: 25 kDa calcium-binding protein 著者 Fowler, A, Kilpatrick, A.M. 登録日 2016-04-11 公開日 2016-08-17 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Solution NMR structures of the C-domain of Tetrahymena cytoskeletal protein Tcb2 reveal distinct calcium-induced structural rearrangements. Proteins, 84, 2016
7U5T	Structure of DHQS/EPSPS dimer from Candida albicans Aro1 分子名称: Pentafunctional AROM polypeptide 著者 Quade, B, Borek, D, Otwinowski, Z, Center for Structural Genomics of Infectious Diseases (CSGID) 登録日 2022-03-02 公開日 2022-05-04 最終更新日 2024-02-14 実験手法 ELECTRON MICROSCOPY (3.43 Å) 主引用文献 Molecular analysis and essentiality of Aro1 shikimate biosynthesis multi-enzyme in Candida albicans. Life Sci Alliance, 5, 2022
5M5U	Clathrin heavy chain N-terminal domain bound to a clathrin-box motif from hepatitis D virus large antigen (clade 1) 分子名称: Clathrin heavy chain 1, GLYCEROL, Large delta antigen 著者 Muenzner, J, Graham, S.C. 登録日 2016-10-22 公開日 2016-11-23 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Cellular and viral peptides bind multiple sites on the N-terminal domain of clathrin. Traffic, 18, 2017
8PMK	Cryo-EM structure of active Phthaloyl-CoA decarboxylase (Pcd) complex with prFMN bound 分子名称: FE (III) ION, POTASSIUM ION, Phthaloyl-CoA decarboxylase, ... 著者 Kayastha, K, Ermler, U. 登録日 2023-06-28 公開日 2024-07-10 実験手法 ELECTRON MICROSCOPY (2.43 Å) 主引用文献 Active Pcd complex with prFMN bound To Be Published
3K4E	Puf3 RNA binding domain bound to Cox17 RNA 3' UTR recognition sequence site A 分子名称: RNA (5'-R(P*CP*UP*UP*GP*UP*AP*UP*AP*UP*A)-3'), mRNA-binding protein PUF3 著者 Zhu, D, Stumpf, C.R, Krahn, J.M, Wickens, M, Hall, T.M.T. 登録日 2009-10-05 公開日 2009-10-27 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 A 5' cytosine binding pocket in Puf3p specifies regulation of mitochondrial mRNAs. Proc.Natl.Acad.Sci.USA, 106, 2009
7BYW	Crystal structure of Acidovorax avenae L-fucose mutarotase (L-fucose-bound form) 分子名称: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, L-fucose mutarotase, alpha-L-fucopyranose 著者 Watanabe, Y, Watanabe, S. 登録日 2020-04-24 公開日 2020-05-27 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.75 Å) 主引用文献 Functional and structural characterization of a novel L-fucose mutarotase involved in non-phosphorylative pathway of L-fucose metabolism. Biochem.Biophys.Res.Commun., 528, 2020
3JSO	Classic Protein With a New Twist: crystal structure of a LexA repressor DNA complex 分子名称: DNA (5'-D(*TP*AP*TP*AP*CP*TP*GP*TP*AP*TP*AP*TP*AP*TP*AP*TP*AP*CP*AP*GP*TP*A)-3'), LexA repressor 著者 Zhang, A.P.P, Pigli, Y.Z, Rice, P.A. 登録日 2009-09-10 公開日 2010-08-18 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.29 Å) 主引用文献 Structure of the LexA-DNA complex and implications for SOS box measurement. Nature, 466, 2010
7LTM	Hum8 capsid 分子名称: 2'-DEOXYADENOSINE-5'-MONOPHOSPHATE, Capsid protein 著者 Mietzsch, M, Agbandje-McKenna, M. 登録日 2021-02-19 公開日 2021-07-07 最終更新日 2024-05-29 実験手法 ELECTRON MICROSCOPY (2.49 Å) 主引用文献 Receptor Switching in Newly Evolved Adeno-associated Viruses. J.Virol., 95, 2021
5MH3	Crystal structure of a DM9 domain containing protein from Crassostrea gigas with K43A mutation 分子名称: GLYCEROL, Natterin-3 著者 Weinert, T, Warkentin, E, Pang, G. 登録日 2016-11-22 公開日 2017-12-27 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 DM9 Domain Containing Protein Functions As a Pattern Recognition Receptor with Broad Microbial Recognition Spectrum. Front Immunol, 8, 2017
2N7J	Sidechain chi1 distribution in B3 domain of protein G from extensive sets of residual dipolar couplings 分子名称: Immunoglobulin G-binding protein G 著者 Grishaev, A, Li, F, Ying, J, Bax, A. 登録日 2015-09-12 公開日 2015-10-14 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Side Chain Conformational Distributions of a Small Protein Derived from Model-Free Analysis of a Large Set of Residual Dipolar Couplings. J.Am.Chem.Soc., 137, 2015
7BZC	Crystal structure of plant sesterterpene synthase AtTPS18 complexed with farnesyl thiolodiphosphate (FSPP) 分子名称: MAGNESIUM ION, S-[(2E,6E)-3,7,11-TRIMETHYLDODECA-2,6,10-TRIENYL] TRIHYDROGEN THIODIPHOSPHATE, Terpenoid synthase 18 著者 Li, J.X, Wang, G.D, Zhang, P. 登録日 2020-04-27 公開日 2020-09-23 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.303 Å) 主引用文献 Molecular Basis for Sesterterpene Diversity Produced by Plant Terpene Synthases. Plant Commun., 1, 2020
5M7V	Translation initiation factor 4E in complex with (RP)-m2(7,2'O)GppSpG mRNA 5' cap analog (beta-S-ARCA D1) 分子名称: Eukaryotic translation initiation factor 4E, GLYCEROL, [(2~{R},3~{R},4~{R},5~{R})-5-(2-azanyl-7-methyl-6-oxidanylidene-1~{H}-purin-7-ium-9-yl)-4-methoxy-3-oxidanyl-oxolan-2-yl]methyl [phosphonooxy(sulfanyl)phosphoryl] hydrogen phosphate 著者 Warminski, M, Nowak, E, Kowalska, J, Jemielity, J, Nowotny, M. 登録日 2016-10-28 公開日 2017-12-20 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.74 Å) 主引用文献 Translation initiation factor 4E in complex with (RP)-m2(7,2'O)GppSpG mRNA 5' cap analog (beta-S-ARCA D1) To Be Published
2YM9	SipD from Salmonella typhimurium 分子名称: CELL INVASION PROTEIN SIPD, GLYCEROL, SULFATE ION 著者 Lunelli, M, Kolbe, M. 登録日 2011-06-06 公開日 2011-08-17 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Crystal Structure of Prgi-Sipd: Insight Into a Secretion Competent State of the Type Three Secretion System Needle Tip and its Interaction with Host Ligands Plos Pathog., 7, 2011
7BZG	Structure of Bacillus subtilis HxlR, wild type in complex with formaldehyde and DNA 分子名称: 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL, DI(HYDROXYETHYL)ETHER, DNA (5'-D(*CP*AP*GP*TP*AP*TP*CP*CP*TP*CP*GP*AP*GP*GP*AP*TP*AP*CP*TP*G)-3'), ... 著者 Zhu, R, Chen, P.R. 登録日 2020-04-27 公開日 2021-02-03 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Genetically encoded formaldehyde sensors inspired by a protein intra-helical crosslinking reaction. Nat Commun, 12, 2021
5MJ6	Ligand-induced conformational change of Insulin-regulated aminopeptidase: insights on catalytic mechanism and active site plasticity. 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, BROMIDE ION, ... 著者 Mpakali, A, Stratikos, E, Saridakis, E, Giastas, P. 登録日 2016-11-30 公開日 2017-04-05 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.53 Å) 主引用文献 Ligand-Induced Conformational Change of Insulin-Regulated Aminopeptidase: Insights on Catalytic Mechanism and Active Site Plasticity. J. Med. Chem., 60, 2017

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