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7SEB
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BU of 7seb by Molmil
Crystal structure of human Fibrillarin in complex with compound 2 from single soak
分子名称: 6-(trifluoromethyl)pyrimidin-4-amine, FORMIC ACID, rRNA 2'-O-methyltransferase fibrillarin
著者Shi, Y, El-Deeb, I.M, Masic, V, Hartley-Tassell, L, Maggioni, A, von Itzstein, M, Ve, T.
登録日2021-09-30
公開日2022-02-09
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Discovery of Cofactor Competitive Inhibitors against the Human Methyltransferase Fibrillarin.
Pharmaceuticals, 15, 2021
7RWH
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BU of 7rwh by Molmil
Crystal structure of human methionine adenosyltransferase 2A (MAT2A) in complex with SAM and allosteric inhibitor AGI-41998
分子名称: 1,2-ETHANEDIOL, 8-(4-bromophenyl)-6-(4-methoxyphenyl)-2-[2,2,2-tris(fluoranyl)ethylamino]pyrido[4,3-d]pyrimidin-7-ol, CHLORIDE ION, ...
著者Jin, L, Padyana, A.K.
登録日2021-08-19
公開日2022-03-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.17 Å)
主引用文献Leveraging Structure-Based Drug Design to Identify Next-Generation MAT2A Inhibitors, Including Brain-Penetrant and Peripherally Efficacious Leads.
J.Med.Chem., 65, 2022
7RWG
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BU of 7rwg by Molmil
"Crystal structure of human methionine adenosyltransferase 2A (MAT2A) in complex with SAM and allosteric inhibitor AGI-43192
分子名称: (8R)-8-(4-chlorophenyl)-6-(2-methyl-2H-indazol-5-yl)-2-[(2,2,2-trifluoroethyl)amino]-5,8-dihydropyrido[4,3-d]pyrimidin-7(6H)-one, 1,2-ETHANEDIOL, CHLORIDE ION, ...
著者Jin, L, Padyana, A.K.
登録日2021-08-19
公開日2022-03-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (0.97 Å)
主引用文献Leveraging Structure-Based Drug Design to Identify Next-Generation MAT2A Inhibitors, Including Brain-Penetrant and Peripherally Efficacious Leads.
J.Med.Chem., 65, 2022
2D9T
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BU of 2d9t by Molmil
Solution structure of the Tudor domain of Tudor domain containing protein 3 from mouse
分子名称: Tudor domain-containing protein 3
著者Li, H, Tomizawa, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-12-13
公開日2006-06-13
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the Tudor domain of Tudor domain containing protein 3 from mouse
To be Published
7RW7
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BU of 7rw7 by Molmil
Crystal structure of human methionine adenosyltransferase 2A (MAT2A) in complex with SAM and allosteric inhibitor Compound 9
分子名称: (3'R)-2-[(cyclopropylmethyl)amino]-6-(4-methoxyphenyl)-1'-[(1H-pyrazol-5-yl)methyl]-5,6-dihydro-7H-spiro[pyrido[4,3-d]pyrimidine-8,3'-pyrrolidin]-7-one, 1,2-ETHANEDIOL, CHLORIDE ION, ...
著者Jin, L, Padyana, A.K.
登録日2021-08-19
公開日2022-03-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.19 Å)
主引用文献Leveraging Structure-Based Drug Design to Identify Next-Generation MAT2A Inhibitors, Including Brain-Penetrant and Peripherally Efficacious Leads.
J.Med.Chem., 65, 2022
7RW5
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BU of 7rw5 by Molmil
Crystal structure of human methionine adenosyltransferase 2A (MAT2A) in complex with SAM and allosteric inhibitor Compound 1
分子名称: (3'R)-N-(cyclopropylmethyl)-1'-[(2-fluorophenyl)methyl]-4-methyl-5H,7H-spiro[pyrano[4,3-d]pyrimidine-8,3'-pyrrolidin]-2-amine, S-ADENOSYLMETHIONINE, S-adenosylmethionine synthase isoform type-2
著者Jin, L, Padyana, A.K.
登録日2021-08-19
公開日2022-03-23
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Leveraging Structure-Based Drug Design to Identify Next-Generation MAT2A Inhibitors, Including Brain-Penetrant and Peripherally Efficacious Leads.
J.Med.Chem., 65, 2022
7SLQ
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BU of 7slq by Molmil
Cryo-EM structure of 7SK core RNP with circular RNA
分子名称: 7SK snRNA methylphosphate capping enzyme, La-related protein 7, Minimal circular 7SK RNA, ...
著者Yang, Y, Liu, S, Zhou, Z.H, Feigon, J.
登録日2021-10-24
公開日2022-03-30
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.7 Å)
主引用文献Structural basis of RNA conformational switching in the transcriptional regulator 7SK RNP.
Mol.Cell, 82, 2022
2DAO
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BU of 2dao by Molmil
Solution structure of ETS domain Transcriptional factor ETV6 protein
分子名称: Transcription factor ETV6
著者Niraula, T.N, Sasagawa, A, Tomizawa, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-12-14
公開日2006-12-12
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of ETS domain Transcriptional factor ETV6 protein
To be Published
7SLP
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BU of 7slp by Molmil
Cryo-EM structure of 7SK core RNP with linear RNA
分子名称: 7SK snRNA methylphosphate capping enzyme, La-related protein 7, Linear 7SK RNA, ...
著者Yang, Y, Liu, S, Zhou, Z.H, Feigon, J.
登録日2021-10-24
公開日2022-03-30
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Structural basis of RNA conformational switching in the transcriptional regulator 7SK RNP.
Mol.Cell, 82, 2022
2DLX
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BU of 2dlx by Molmil
Solution structure of the UAS domain of human UBX domain-containing protein 7
分子名称: UBX domain-containing protein 7
著者Zhang, H.P, Nagasima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-04-20
公開日2006-10-20
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the UAS domain of human UBX domain-containing protein 7
to be published
2DB1
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BU of 2db1 by Molmil
Solution structure of the RNA binding domain in heterogeneous nuclear ribonucleoprotein F homolog
分子名称: heterogeneous nuclear ribonucleoprotein F
著者Abe, C, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-12-14
公開日2006-06-14
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the RNA binding domain in heterogeneous nuclear ribonucleoprotein F homolog
To be Published
7SAN
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BU of 7san by Molmil
Crystal structure of human hypoxanthine guanine phosphoribzosyltransferase in complex with (4S,7S)-7-hydroxy-4-((guanin-9-yl)methyl)-2,5-dioxaheptan-1,7-diphosphonate
分子名称: ({(2S)-3-(2-amino-6-oxo-1,6-dihydro-9H-purin-9-yl)-2-[(2S)-2-hydroxy-2-phosphonoethoxy]propoxy}methyl)phosphonic acid, Hypoxanthine-guanine phosphoribosyltransferase
著者Guddat, L.W, Keough, D.T.
登録日2021-09-22
公開日2022-05-18
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.58155513 Å)
主引用文献Stereo-Defined Acyclic Nucleoside Phosphonates are Selective and Potent Inhibitors of Parasite 6-Oxopurine Phosphoribosyltransferases.
J.Med.Chem., 65, 2022
2DN4
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BU of 2dn4 by Molmil
Solution Structure of RSGI RUH-060, a GTF2I domain in human cDNA
分子名称: General transcription factor II-I
著者Doi-Katayama, Y, Hirota, H, Suetake, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-04-25
公開日2006-10-25
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution Structure of RSGI RUH-060, a GTF2I domain in human cDNA
To be published
7S7B
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BU of 7s7b by Molmil
Human Nuclear exosome targeting (NEXT) complex homodimer bound to RNA (substrate 1)
分子名称: Exosome RNA helicase MTR4, RNA (46-MER), RNA-binding protein 7, ...
著者Puno, M.R, Lima, C.D.
登録日2021-09-15
公開日2022-06-15
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (4.06 Å)
主引用文献Structural basis for RNA surveillance by the human nuclear exosome targeting (NEXT) complex.
Cell, 185, 2022
7S7C
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BU of 7s7c by Molmil
Human Nuclear Exosome Targeting (NEXT) complex bound to RNA (substrate 2)
分子名称: Exosome RNA helicase MTR4, RNA (30-MER), RNA-binding protein 7, ...
著者Puno, M.R, Lima, C.D.
登録日2021-09-15
公開日2022-06-15
最終更新日2024-06-05
実験手法ELECTRON MICROSCOPY (3.62 Å)
主引用文献Structural basis for RNA surveillance by the human nuclear exosome targeting (NEXT) complex.
Cell, 185, 2022
2DO5
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BU of 2do5 by Molmil
Solution structure of the SAP domain of human splicing factor 3B subunit 2
分子名称: Splicing factor 3B subunit 2
著者Suzuki, S, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-04-27
公開日2007-04-17
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the SAP domain of human splicing factor 3B subunit 2
To be Published
7RUI
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BU of 7rui by Molmil
Bromodomain-containing protein 4 (BRD4) bromodomain 1 (BD1) complexed with XR844
分子名称: Bromodomain-containing protein 4, N-{1-[1,1-di(pyridin-2-yl)ethyl]-6-(5-{[(2-fluorophenyl)carbamoyl]amino}-1-methyl-6-oxo-1,6-dihydropyridin-3-yl)-1H-indol-4-yl}-2,2,2-trifluoroethane-1-sulfonamide
著者Ratia, K.M, Xiong, R, Li, Y, Shen, Z, Zhao, J, Huang, F, Dubrovyskyii, O, Thatcher, G.R.
登録日2021-08-17
公開日2022-08-24
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Bromodomain-containing protein 4 (BRD4) bromodomain 1 (BD1) complexed with XR844
To Be Published
2DH2
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BU of 2dh2 by Molmil
Crystal Structure of human ED-4F2hc
分子名称: 4F2 cell-surface antigen heavy chain, ACETATE ION
著者Fort, J, Fita, I, Palacin, M.
登録日2006-03-21
公開日2007-03-27
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献The structure of human 4F2hc ectodomain provides a model for homodimerization and electrostatic interaction with plasma membrane.
J.Biol.Chem., 282, 2007
2DN5
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BU of 2dn5 by Molmil
Solution Structure of RSGI RUH-057, a GTF2I domain in human cDNA
分子名称: General transcription factor II-I repeat domain-containing protein 1
著者Doi-Katayama, Y, Hirota, H, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-04-25
公開日2006-10-25
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution Structure of RSGI RUH-057, a GTF2I domain in human cDNA
To be Published
2DK2
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BU of 2dk2 by Molmil
Solution structure of RRM domain in heterogeneous nuclear ribonucleoprotein R (hnRNP R)
分子名称: Heterogeneous nuclear ribonucleoprotein R
著者He, F, Muto, Y, Inoue, M, Kigawa, T, Shirouzu, M, Terada, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-04-06
公開日2006-10-06
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of RRM domain in heterogeneous nuclear ribonucleoprotein R (hnRNP R)
To be Published
2DL6
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BU of 2dl6 by Molmil
Solution structure of the first BRK domain from human chromodomain-helicase-DNA-binding protein 8
分子名称: Chromodomain-helicase-DNA-binding protein 8
著者Suetake, T, Nagashima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-04-17
公開日2006-10-17
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the first BRK domain from human chromodomain-helicase-DNA-binding protein 8
To be Published
2DSB
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BU of 2dsb by Molmil
Crystal structure of human ADP-ribose pyrophosphatase NUDT5
分子名称: ADP-sugar pyrophosphatase
著者Zha, M, Zhong, C, Ding, J.
登録日2006-06-28
公開日2006-11-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal Structures of Human NUDT5 Reveal Insights into the Structural Basis of the Substrate Specificity
J.Mol.Biol., 364, 2006
2DHS
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BU of 2dhs by Molmil
Solution Structure of Nucleic Acid Binding Protein CUGBP1ab and its Binding Study with DNA and RNA
分子名称: CUG triplet repeat RNA-binding protein 1
著者Xia, Y.L, Jun, K.Y, Zhu, Q, Han, X.G, Zhang, H, Timchenko, L, Swanson, M, Gao, X.L.
登録日2006-03-25
公開日2007-04-24
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution Structure of Nucleic Acid Binding Protein CUGBP1ab and its Binding Study with DNA and RNA
To be Published
2DW4
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Crystal structure of human LSD1 at 2.3 A resolution
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, Lysine-specific histone demethylase 1
著者Sengoku, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2006-08-02
公開日2007-09-04
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of histone demethylase LSD1 and tranylcypromine at 2.25A
Biochem.Biophys.Res.Commun., 366, 2008
7SFZ
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BU of 7sfz by Molmil
Crystal structure of Mis18a-yippee domain
分子名称: Protein Mis18-alpha, SULFATE ION, ZINC ION
著者Park, S.H, Cho, U.
登録日2021-10-04
公開日2022-10-26
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.002 Å)
主引用文献Structural Basis for Mis18 Complex Assembly: Implications for Centromere Maintenance
To Be Published

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