PDB: 11035 件ウェブページステータス検索Chemie searchBIRD

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5M0X	Structure of apo structure of GH36 alpha-galactosidase from Thermotoga maritima 分子名称: Alpha-galactosidase, MAGNESIUM ION, SULFATE ION 著者 Pengelly, R, Gloster, T. 登録日 2016-10-06 公開日 2016-11-09 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural Snapshots for Mechanism-Based Inactivation of a Glycoside Hydrolase by Cyclopropyl Carbasugars. Angew.Chem.Int.Ed.Engl., 55, 2016
5F35	Structure of quinolinate synthase in complex with citrate 分子名称: CITRATE ANION, IRON/SULFUR CLUSTER, MAGNESIUM ION, ... 著者 Volbeda, A, Fontecilla-Camps, J.C. 登録日 2015-12-02 公開日 2016-08-31 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Crystal Structures of Quinolinate Synthase in Complex with a Substrate Analogue, the Condensation Intermediate, and Substrate-Derived Product. J.Am.Chem.Soc., 138, 2016
5F33	Structure of quinolinate synthase in complex with phosphoglycolohydroxamate 分子名称: IRON/SULFUR CLUSTER, PHOSPHOGLYCOLOHYDROXAMIC ACID, Quinolinate synthase A, ... 著者 Volbeda, A, Fontecilla-Camps, J.C. 登録日 2015-12-02 公開日 2016-09-07 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Crystal Structures of Quinolinate Synthase in Complex with a Substrate Analogue, the Condensation Intermediate, and Substrate-Derived Product. J.Am.Chem.Soc., 138, 2016
4HNO	High resolution crystal structure of DNA Apurinic/apyrimidinic (AP) endonuclease IV Nfo from Thermatoga maritima 分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, MAGNESIUM ION, ... 著者 Shin, D.S, Hosfield, D.J, Arvai, A.S, Tsutakawa, S.E, Tainer, J.A. 登録日 2012-10-20 公開日 2013-01-23 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (0.9194 Å) 主引用文献 Conserved Structural Chemistry for Incision Activity in Structurally Non-homologous Apurinic/Apyrimidinic Endonuclease APE1 and Endonuclease IV DNA Repair Enzymes. J.Biol.Chem., 288, 2013
4Q0F	Crystal Structure of Thermotoga maritima FtsH Periplasmic domain 分子名称: ATP-dependent zinc metalloprotease FtsH 著者 An, J.Y, Sharif, H, Barrera, F.N, Karabadzhak, A, Kang, G.B, Park, K.J, Sakkiah, S, Lee, K.W, Lee, S, Engelman, D.M, Wang, J, Eom, S.H. 登録日 2014-04-01 公開日 2015-04-01 実験手法 X-RAY DIFFRACTION (1.948 Å) 主引用文献 Structures of periplasmic and transmembrane domains of FtsH suggest a reverse translocon mechanism for protein extraction from membrane To be Published
6F48	Structure of quinolinate synthase with reaction intermediates X and Y 分子名称: 2-imino,3-carboxy,5-hydroxy,6-oxo hexanoic acid, 5-hydroxy,-4,5-dihydroquinolinate, CHLORIDE ION, ... 著者 Volbeda, A, Fontecilla-Camps, J.C. 登録日 2017-11-29 公開日 2018-04-25 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Crystallographic Trapping of Reaction Intermediates in Quinolinic Acid Synthesis by NadA. ACS Chem. Biol., 13, 2018
5H1W	Crystal Structure of Hyperthermophilic Thermotoga maritima L-Ketose-3-Epimerase with Mn2+ and L(+)-Erythrulose 分子名称: L-Erythrulose, MANGANESE (II) ION, PENTAETHYLENE GLYCOL, ... 著者 Cao, T.P, Shin, S.M, Lee, D.W, Lee, S.H. 登録日 2016-10-12 公開日 2017-03-15 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.631 Å) 主引用文献 TM0416, a Hyperthermophilic Promiscuous Nonphosphorylated Sugar Isomerase, Catalyzes Various C5and C6Epimerization Reactions Appl. Environ. Microbiol., 83, 2017
6F4D	Structure of the Y21F variant of quinolinate synthase in complex with PGH 分子名称: CHLORIDE ION, IRON/SULFUR CLUSTER, PHOSPHATE ION, ... 著者 Volbeda, A, Fontecilla-Camps, J.C. 登録日 2017-11-29 公開日 2018-04-25 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Crystallographic Trapping of Reaction Intermediates in Quinolinic Acid Synthesis by NadA. ACS Chem. Biol., 13, 2018
5M16	Structure of GH36 alpha-galactosidase from Thermotoga maritima in complex with a hydrolysed cyclopropyl carbasugar. 分子名称: (1~{R},2~{S},3~{S},4~{S},5~{S},6~{S})-1-(hydroxymethyl)bicyclo[4.1.0]heptane-2,3,4,5-tetrol, Alpha-galactosidase, MAGNESIUM ION, ... 著者 Pengelly, R, Gloster, T. 登録日 2016-10-07 公開日 2016-11-09 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.62 Å) 主引用文献 Structural Snapshots for Mechanism-Based Inactivation of a Glycoside Hydrolase by Cyclopropyl Carbasugars. Angew.Chem.Int.Ed.Engl., 55, 2016
5M1I	Structure of GH36 alpha-galactosidase from Thermotoga maritima in a covalent complex with a cyclopropyl carbasugar. 分子名称: (1~{R},2~{S},3~{S},4~{S},6~{R})-4-fluoranyl-1-(hydroxymethyl)bicyclo[4.1.0]heptane-2,3-diol, 1,2-ETHANEDIOL, Alpha-galactosidase, ... 著者 Pengelly, R, Gloster, T. 登録日 2016-10-07 公開日 2016-11-09 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Structural Snapshots for Mechanism-Based Inactivation of a Glycoside Hydrolase by Cyclopropyl Carbasugars. Angew.Chem.Int.Ed.Engl., 55, 2016
4Q37	Crystal structure of the hypothetical protein TM0182 Thermotoga maritima, N-terminal domain. 分子名称: PLATINUM (II) ION, Radical SAM protein 著者 Hocker, B, Farias-Rico, J.A. 登録日 2014-04-11 公開日 2014-07-16 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (3.19 Å) 主引用文献 Evolutionary relationship of two ancient protein superfolds. Nat.Chem.Biol., 10, 2014
2CET	Beta-glucosidase from Thermotoga maritima in complex with phenethyl- substituted glucoimidazole 分子名称: (5R,6R,7S,8S)-5-(HYDROXYMETHYL)-2-(2-PHENYLETHYL)-1,5,6,7,8,8A-HEXAHYDROIMIDAZO[1,2-A]PYRIDINE-6,7,8-TRIOL, ACETATE ION, BETA-GLUCOSIDASE A, ... 著者 Gloster, T.M, Roberts, S, Vasella, A, Davies, G.J. 登録日 2006-02-10 公開日 2006-09-27 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.97 Å) 主引用文献 Structural, Kinetic, and Thermodynamic Analysis of Glucoimidazole-Derived Glycosidase Inhibitors. Biochemistry, 45, 2006
4P3X	Structure of the Fe4S4 quinolinate synthase NadA from Thermotoga maritima 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, IRON/SULFUR CLUSTER, Quinolinate synthase A, ... 著者 Cherrier, M.V, Chan, A, Darnault, C, Reichmann, D, Amara, P, Ollagnier de Choudens, S, Fontecilla-Camps, J.C. 登録日 2014-03-10 公開日 2014-04-02 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 The crystal structure of Fe4S4 quinolinate synthase unravels an enzymatic dehydration mechanism that uses tyrosine and a hydrolase-type triad. J.Am.Chem.Soc., 136, 2014
5LQM	Structure of quinolinate synthase Y21F mutant in complex with citrate 分子名称: CITRATE ANION, IRON/SULFUR CLUSTER, Quinolinate synthase A 著者 Volbeda, A, Fontecilla-Camps, J.C. 登録日 2016-08-17 公開日 2016-08-31 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.62 Å) 主引用文献 Crystal Structures of Quinolinate Synthase in Complex with a Substrate Analogue, the Condensation Intermediate, and Substrate-Derived Product. J.Am.Chem.Soc., 138, 2016
4HYN	X-ray crystal structure of Thermotoga maritima FliY 分子名称: CheC, inhibitor of MCP methylation / FliN fusion protein 著者 Crane, B.R, Sircar, R, Bilwes, A.M. 登録日 2012-11-13 公開日 2013-04-03 最終更新日 2013-05-29 実験手法 X-RAY DIFFRACTION (2.5 Å) 主引用文献 Structure and Activity of the Flagellar Rotor Protein FliY: A MEMBER OF THE CheC PHOSPHATASE FAMILY. J.Biol.Chem., 288, 2013
1B3Q	CRYSTAL STRUCTURE OF CHEA-289, A SIGNAL TRANSDUCING HISTIDINE KINASE 分子名称: MERCURY (II) ION, PROTEIN (CHEMOTAXIS PROTEIN CHEA) 著者 Bilwes, A.M, Alex, L.A, Crane, B.R, Simon, M.I. 登録日 1998-12-14 公開日 1999-12-15 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.6 Å) 主引用文献 Structure of CheA, a signal-transducing histidine kinase. Cell(Cambridge,Mass.), 96, 1999
5H6H	Crystal Structure of Hyperthermophilic Thermotoga maritima L-Ribulose 3-Epimerase with Mn2+ 分子名称: MANGANESE (II) ION, PENTAETHYLENE GLYCOL, TETRAETHYLENE GLYCOL, ... 著者 Cao, T.-P, Choi, J.M, Shin, S.M, Le, D.W, Lee, S.H. 登録日 2016-11-13 公開日 2017-03-15 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (1.446 Å) 主引用文献 TM0416, a Hyperthermophilic Promiscuous Nonphosphorylated Sugar Isomerase, Catalyzes Various C5and C6Epimerization Reactions Appl. Environ. Microbiol., 83, 2017
1DMG	CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN L4 分子名称: CITRIC ACID, RIBOSOMAL PROTEIN L4 著者 Worbs, M, Huber, R, Wahl, M.C. 登録日 1999-12-14 公開日 2000-12-18 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Crystal structure of ribosomal protein L4 shows RNA-binding sites for ribosome incorporation and feedback control of the S10 operon. EMBO J., 19, 2000
4JC0	Crystal structure of Thermotoga maritima holo RimO in complex with pentasulfide, Northeast Structural Genomics Consortium Target VR77 分子名称: IRON/SULFUR PENTA-SULFIDE CONNECTED CLUSTERS, Ribosomal protein S12 methylthiotransferase RimO 著者 Forouhar, F, Hussain, M, Seetharaman, J, Fang, Y, Chen, C.X, Cunningham, K, Conover, K, Ma, L.-C, Xiao, R, Acton, T.B, Montelione, G.T, Tong, L, Hunt, J.F, Northeast Structural Genomics Consortium (NESG) 登録日 2013-02-20 公開日 2013-04-10 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Two Fe-S clusters catalyze sulfur insertion by radical-SAM methylthiotransferases. Nat.Chem.Biol., 9, 2013
2CES	Beta-glucosidase from Thermotoga maritima in complex with glucoimidazole 分子名称: ACETATE ION, BETA-GLUCOSIDASE A, CALCIUM ION, ... 著者 Gloster, T.M, Roberts, S, Vasella, A, Davies, G.J. 登録日 2006-02-10 公開日 2006-09-27 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Structural, Kinetic, and Thermodynamic Analysis of Glucoimidazole-Derived Glycosidase Inhibitors. Biochemistry, 45, 2006
3G4A	Crystal structure of flavine dependant thymidylate synthase S88A mutant from Thermotoga maritima at 1.95 angstrom resolution 分子名称: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, FLAVIN-ADENINE DINUCLEOTIDE, Thymidylate synthase thyX 著者 Mathews, I.I, Lesley, S.A, Kohen, A. 登録日 2009-02-03 公開日 2009-04-07 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 An unusual mechanism of thymidylate biosynthesis in organisms containing the thyX gene. Nature, 458, 2009
7DYA	Crystal structure of TmFtn with calcium ions 分子名称: CALCIUM ION, FE (III) ION, Ferritin 著者 Zhang, X, Zhao, G. 登録日 2021-01-20 公開日 2021-09-01 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (2.197 Å) 主引用文献 Protein interface redesign facilitates the transformation of nanocage building blocks to 1D and 2D nanomaterials. Nat Commun, 12, 2021
5XUM	Crystal structure of Thermotoga maritima holo-[acyl-carrier-protein] synthase (AcpS) 分子名称: GLYCEROL, Holo-[acyl-carrier-protein] synthase 著者 Liao, Y.P, Wang, D.L, Yin, D.P, Zhang, Q.Y, Wang, Y.M, Wang, D.Q, Zhu, H.X, Chen, S. 登録日 2017-06-23 公開日 2018-06-27 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Crystal structures of acyl carrier protein synthases (AcpS) from three Gram-negative bacteria To Be Published
7EC9	Structure of the Thermotoga maritima Family 5 endo-glucanase in complex with 1-deoxynojiromycin 分子名称: 1-DEOXYNOJIRIMYCIN, Endoglucanase, ISOPROPYL ALCOHOL 著者 Manoj, N, Garg, P. 登録日 2021-03-11 公開日 2022-03-16 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structure of an iminosugar complex of a glycoside hydrolase family 5 lichenase provides insights into the active site. Biochimie, 204, 2023
5Y0R	Crystal structure of Thermotoga maritima TmcAL (apo, form I) 分子名称: TmTmcAL(SeMet) 著者 Yamashita, S, Tomita, K. 登録日 2017-07-18 公開日 2018-07-18 最終更新日 2018-12-26 実験手法 X-RAY DIFFRACTION (3.11 Å) 主引用文献 Acetate-dependent tRNA acetylation required for decoding fidelity in protein synthesis. Nat. Chem. Biol., 14, 2018

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