PDB: 47120 件ウェブページステータス検索Chemie searchBIRD

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3HB9	Crystal Structure of S. aureus Pyruvate Carboxylase A610T Mutant 分子名称: 5-(HEXAHYDRO-2-OXO-1H-THIENO[3,4-D]IMIDAZOL-6-YL)PENTANAL, ADENOSINE-5'-DIPHOSPHATE, MANGANESE (II) ION, ... 著者 Tong, L, Yu, L.P.C. 登録日 2009-05-04 公開日 2009-06-30 最終更新日 2021-10-13 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 A Symmetrical Tetramer for S. aureus Pyruvate Carboxylase in Complex with Coenzyme A. Structure, 17, 2009
7S9O	Binary complex of DNA Polymerase Beta with Ring open Intermediate Fapy-dG in the template position 分子名称: DNA (5'-D(*CP*CP*GP*AP*C*(IFP)P*TP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*A*(SO4))-3'), DNA (5'-D(P*GP*TP*CP*GP*G)-3'), ... 著者 Freudenthal, B.D, Ryan, B.J. 登録日 2021-09-21 公開日 2022-08-03 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.23 Å) 主引用文献 Structural Dynamics of a Common Mutagenic Oxidative DNA Lesion in Duplex DNA and during DNA Replication. J.Am.Chem.Soc., 144, 2022
7AD5	Crystal structure of the effector AvrLm5-9 from Leptosphaeria maculans 分子名称: ACETATE ION, Avirulence protein LmJ1, GLYCEROL, ... 著者 Lazar, N, Mesarich, C, Petit-Houdenot, Y, Talbi, N, Li de la Sierra-Gallay, I, Zelie, E, Blondeau, K, Gracy, J, Ollivier, B, van de Wouw, A, Balesdent, M.H, Idnurm, A, van Tilbeurgh, H, Fudal, I. 登録日 2020-09-14 公開日 2021-10-06 最終更新日 2022-07-27 実験手法 X-RAY DIFFRACTION (2.14 Å) 主引用文献 A new family of structurally conserved fungal effectors displays epistatic interactions with plant resistance proteins. Plos Pathog., 18, 2022
8OOZ	Glutamine synthetase from Methermicoccus shengliensis in complex with MgATP at 2.7 A resolution 分子名称: ADENOSINE-5'-TRIPHOSPHATE, FORMIC ACID, GLYCEROL, ... 著者 Mueller, M.-C, Lemaire, O.N, Wagner, T. 登録日 2023-04-06 公開日 2024-01-24 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Differences in regulation mechanisms of glutamine synthetases from methanogenic archaea unveiled by structural investigations. Commun Biol, 7, 2024
7PMV	VWF Tubules of D1D2D'D3 domains 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... 著者 Javitt, G, Fass, D. 登録日 2021-09-02 公開日 2022-02-23 最終更新日 2022-05-25 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 Helical self-assembly of a mucin segment suggests an evolutionary origin for von Willebrand factor tubules. Proc.Natl.Acad.Sci.USA, 119, 2022
5KKF	Crystal structure of TEM1 beta-lactamase mutant I263L 分子名称: Beta-lactamase TEM 著者 Roose, B.W, Dmochowski, I.J. 登録日 2016-06-21 公開日 2017-06-28 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.82 Å) 主引用文献 A Structural Basis for129Xe Hyper-CEST Signal in TEM-1 beta-Lactamase. Chemphyschem, 2018
7PHL	Human voltage-gated potassium channel Kv3.1 (with EDTA) 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSHOCHOLINE, POTASSIUM ION, Potassium voltage-gated channel, ... 著者 Chi, G, Qian, P, Castro-Hartmann, P, Venkaya, S, Singh, N.K, McKinley, G, Mukhopadhyay, S.M.M, Fernandez-Cid, A, Pike, A.C.W, Marsden, B, MacLean, E.M, Sader, K, Burgess-Brown, N.A, Duerr, K.L. 登録日 2021-08-17 公開日 2022-03-02 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Cryo-EM structure of the human Kv3.1 channel reveals gating control by the cytoplasmic T1 domain. Nat Commun, 13, 2022
2J7A	Crystal structure of cytochrome c nitrite reductase NrfHA complex from Desulfovibrio vulgaris 分子名称: ACETATE ION, CALCIUM ION, CYTOCHROME C NITRITE REDUCTASE NRFA, ... 著者 Rodrigues, M.L, Oliveira, T.F, Pereira, I.A.C, Archer, M. 登録日 2006-10-06 公開日 2006-12-06 最終更新日 2019-11-06 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 X-Ray Structure of the Membrane-Bound Cytochrome C Quinol Dehydrogenase Nrfh Reveals Novel Haem Coordination. Embo J., 25, 2006
8OPH	Head-to-tail double ring assembly from truncated PVY coat protein 分子名称: Genome polyprotein 著者 Kavcic, L, Kezar, A, Podobnik, M. 登録日 2023-04-07 公開日 2024-01-24 最終更新日 2024-01-31 実験手法 ELECTRON MICROSCOPY (2.93 Å) 主引用文献 From structural polymorphism to structural metamorphosis of the coat protein of flexuous filamentous potato virus Y. Commun Chem, 7, 2024
2Z68	Crystal Structure Of An Artificial Metalloprotein: Cr[N-salicylidene-4-amino-3-hydroxyhydrocinnamic acid]/Wild Type Heme oxygenase 分子名称: Heme oxygenase, SODIUM ION, SULFATE ION, ... 著者 Yokoi, N, Unno, M, Ueno, T, Ikeda-Saito, M, Watanabe, Y. 登録日 2007-07-24 公開日 2007-08-28 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.58 Å) 主引用文献 Ligand design for improvement of thermal stabilityof metal complex/protein hybrids To be Published
5KPY	Structure of a 5-hydroxytryptophan aptamer 分子名称: 5-hydroxy-L-tryptophan, 5-hydroxytryptophan RNA aptamer, IRIDIUM HEXAMMINE ION, ... 著者 Batey, R.T, Porter, E, Merck, M. 登録日 2016-07-05 公開日 2017-01-11 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Recurrent RNA motifs as scaffolds for genetically encodable small-molecule biosensors. Nat. Chem. Biol., 13, 2017
3HDQ	Crystal structure of UDP-galactopyranose mutase (oxidized form) in complex with substrate 分子名称: FLAVIN-ADENINE DINUCLEOTIDE, GALACTOSE-URIDINE-5'-DIPHOSPHATE, UDP-galactopyranose mutase 著者 Partha, S.K, van Straaten, K.E, Sanders, D.A. 登録日 2009-05-07 公開日 2009-12-29 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2.36 Å) 主引用文献 Structural basis of substrate binding to UDP-galactopyranose mutase: crystal structures in the reduced and oxidized state complexed with UDP-galactopyranose and UDP. J.Mol.Biol., 394, 2009
7RX6	Structure of METTL3-METTL14(R298C) mutant methyltransferase complex 分子名称: N6-adenosine-methyltransferase 70 kDa subunit, N6-adenosine-methyltransferase non-catalytic subunit 著者 Wang, P, Nam, Y. 登録日 2021-08-21 公開日 2022-11-09 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structure of METTL3-METTL14(R298C) mutant methyltransferase complex To Be Published
7RX7	Structure of METTL3-METTL14(R298P) mutant methyltransferase complex 分子名称: N6-adenosine-methyltransferase 70 kDa subunit, N6-adenosine-methyltransferase non-catalytic subunit 著者 Wang, P, Nam, Y. 登録日 2021-08-21 公開日 2022-11-09 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (1.645 Å) 主引用文献 Structure of METTL3-METTL14(R298P) mutant methyltransferase complex To Be Published
8OPV	Structure of Mycobacterium tuberculosis beta-oxidation trifunctional enzyme in complex with Resveratrol (Fragment-B-H11) 分子名称: 3-hydroxyacyl-CoA dehydrogenase, GLYCEROL, Putative acyltransferase Rv0859, ... 著者 Dalwani, S, Wierenga, R.K, Venkatesan, R. 登録日 2023-04-10 公開日 2024-01-24 最終更新日 2024-08-14 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Crystallographic fragment-binding studies of the Mycobacterium tuberculosis trifunctional enzyme suggest binding pockets for the tails of the acyl-CoA substrates at its active sites and a potential substrate-channeling path between them. Acta Crystallogr D Struct Biol, 80, 2024
7KBM	Reverse Transcriptase Diabody with R83C Mutation Crystallized in C2 分子名称: Single-chain scFv 著者 Chesterman, C, Arnold, E. 登録日 2020-10-02 公開日 2021-03-10 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Co-crystallization with diabodies: A case study for the introduction of synthetic symmetry. Structure, 29, 2021
3HHQ	Crystal structure of apo dUT1p from Saccharomyces cerevisiae 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ... 著者 Singer, A.U, Evdokimova, E, Kudritska, M, Dong, A, Edwards, A.M, Yakunin, A.F, Savchenko, A. 登録日 2009-05-15 公開日 2009-06-16 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Structure and activity of the Saccharomyces cerevisiae dUTP pyrophosphatase DUT1, an essential housekeeping enzyme. Biochem.J., 437, 2011
3HD2	Crystal structure of E. coli HPPK(Q50A) in complex with MgAMPCPP and pterin 分子名称: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase, ACETATE ION, CHLORIDE ION, ... 著者 Blaszczyk, J, Li, Y, Yan, H, Ji, X. 登録日 2009-05-06 公開日 2010-05-19 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 Role of loop coupling in enzymatic catalysis and conformational dynamics To be Published
7SFS	In situ cryo-EM structure of bacteriophage Sf6 portal:gp7 complex at 2.7A resolution 分子名称: Gene 3 protein, Gene 7 protein 著者 Li, F, Cingolani, G, Hou, C. 登録日 2021-10-04 公開日 2022-11-09 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (2.76 Å) 主引用文献 High-resolution cryo-EM structure of the Shigella virus Sf6 genome delivery tail machine. Sci Adv, 8, 2022
7ADG	Cocktail experiment G: fragments 216 and 338 at 90 mM concentration in complex with Endothiapepsin 分子名称: 2-(1H-imidazol-1-yl)-N-(trans-4-methylcyclohexyl)acetamide, ACETATE ION, DIMETHYL SULFOXIDE, ... 著者 Hassaan, E, Klebe, G, Heine, A, Schiebel, J, Koester, H. 登録日 2020-09-14 公開日 2021-10-06 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (1.0794636 Å) 主引用文献 Comparison of Cocktail Screening in X-Ray Crystallography vs NMR To Be Published
5KLI	Rhodobacter sphaeroides bc1 with stigmatellin and antimycin 分子名称: (1R)-2-{[(R)-(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(DODECANOYLOXY)METHYL]ETHYL (9Z)-OCTADEC-9-ENOATE, (2R,3S,6S,7R,8R)-3-{[3-(FORMYLAMINO)-2-HYDROXYBENZOYL]AMINO}-8-HEXYL-2,6-DIMETHYL-4,9-DIOXO-1,5-DIOXONAN-7-YL (2S)-2-METHYLBUTANOATE, Cytochrome b, ... 著者 Xia, D, Esser, L, Zhou, F, Tang, W.K, Yu, C.A. 登録日 2016-06-24 公開日 2016-10-12 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (2.996 Å) 主引用文献 Hydrogen Bonding to the Substrate Is Not Required for Rieske Iron-Sulfur Protein Docking to the Quinol Oxidation Site of Complex III. J.Biol.Chem., 291, 2016
7ABR	Cryo-EM structure of B. subtilis ClpC (DWB mutant) hexamer bound to a substrate polypeptide 分子名称: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Negative regulator of genetic competence ClpC/MecB, ... 著者 Morreale, F.E, Meinhart, A, Haselbach, D, Clausen, T. 登録日 2020-09-08 公開日 2021-10-06 最終更新日 2022-07-06 実験手法 ELECTRON MICROSCOPY (3.7 Å) 主引用文献 BacPROTACs mediate targeted protein degradation in bacteria. Cell, 185, 2022
7PHH	Human voltage-gated potassium channel Kv3.1 (apo condition) 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSHOCHOLINE, POTASSIUM ION, Potassium voltage-gated channel, ... 著者 Chi, G, Venkaya, S, Singh, N.K, McKinley, G, Mukhopadhyay, S.M.M, Marsden, B, MacLean, E.M, Fernandez-Cid, A, Pike, A.C.W, Savva, C, Ragan, T.J, Burgess-Brown, N.A, Duerr, K.L. 登録日 2021-08-17 公開日 2022-03-02 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3.2 Å) 主引用文献 Cryo-EM structure of the human Kv3.1 channel reveals gating control by the cytoplasmic T1 domain. Nat Commun, 13, 2022
7KBP	Herceptin Diabody with R83T, E85C Mutations 分子名称: GLYCEROL, Single-chain Fv 著者 Chesterman, C, Arnold, E. 登録日 2020-10-02 公開日 2021-03-10 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Co-crystallization with diabodies: A case study for the introduction of synthetic symmetry. Structure, 29, 2021
7PHI	Human voltage-gated potassium channel Kv3.1 (with Zn) 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSHOCHOLINE, POTASSIUM ION, Potassium voltage-gated channel, ... 著者 Chi, G, Qian, P, Castro-Hartmann, P, Venkaya, S, Singh, N.K, McKinley, G, Mukhopadhyay, S.M.M, Fernandez-Cid, A, Marsden, B, MacLean, E.M, Pike, A.C.W, Sader, K, Burgess-Brown, N.A, Duerr, K.L. 登録日 2021-08-17 公開日 2022-03-02 最終更新日 2024-07-17 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Cryo-EM structure of the human Kv3.1 channel reveals gating control by the cytoplasmic T1 domain. Nat Commun, 13, 2022

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