Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2J4G
DownloadVisualize
BU of 2j4g by Molmil
Bacteroides thetaiotaomicron GH84 O-GlcNAcase in complex with n-butyl- thiazoline inhibitor
分子名称: (3AR,5R,6S,7R,7AR)-5-(HYDROXYMETHYL)-2-PROPYL-5,6,7,7A-TETRAHYDRO-3AH-PYRANO[3,2-D][1,3]THIAZOLE-6,7-DIOL, ACETATE ION, GLYCEROL, ...
著者Dennis, R.J, Davies, G.J.
登録日2006-08-31
公開日2007-01-30
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献Analysis of Pugnac and Nag-Thiazoline as Transition State Analogues for Human O-Glcnacase: Mechanistic and Structural Insights Into Inhibitor Selectivity and Transition State Poise.
J.Am.Chem.Soc., 129, 2007
4RI8
DownloadVisualize
BU of 4ri8 by Molmil
FAN1 Nuclease bound to 5' phosphorylated p(dG)/3'(dT-dT-dT-dT) double flap DNA
分子名称: CALCIUM ION, DNA (5'-D(*AP*AP*CP*AP*CP*GP*CP*CP*TP*AP*GP*AP*CP*TP*CP*CP*TP*CP*A)-3'), DNA (5'-D(*TP*TP*TP*GP*AP*GP*GP*AP*GP*TP*CP*TP*TP*T)-3'), ...
著者Pavletich, N.P, Wang, R.
登録日2014-10-05
公開日2014-12-03
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献DNA repair. Mechanism of DNA interstrand cross-link processing by repair nuclease FAN1.
Science, 346, 2014
3JV1
DownloadVisualize
BU of 3jv1 by Molmil
Crystal structure of the Trypanosoma brucei p22 protein
分子名称: P22 protein
著者Sprehe, M, Read, L.K, Schumacher, M.A.
登録日2009-09-15
公開日2010-04-14
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Structure of the Trypanosoma brucei p22 protein, a cytochrome oxidase subunit II-specific RNA-editing accessory factor.
J.Biol.Chem., 285, 2010
2VO5
DownloadVisualize
BU of 2vo5 by Molmil
Structural and biochemical evidence for a boat-like transition state in beta-mannosidases
分子名称: (1R,4R,5R,7R,8R)-2-Benzyl-5-hydroxymethyl-2-aza-bicyclo[2.2.2]octane-4,7,8-triol, 1,2-ETHANEDIOL, BETA-MANNOSIDASE, ...
著者Tailford, L.E, Offen, W.A, Smith, N.L, Dumon, C, Moreland, C, Gratien, J, Heck, M.P, Stick, R.V, Bleriot, Y, Vasella, A, Gilbert, H.J, Davies, G.J.
登録日2008-02-08
公開日2008-04-01
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural and Biochemical Evidence for a Boat-Like Transition State in Beta-Mannosidases.
Nat.Chem.Biol., 4, 2008
4RDW
DownloadVisualize
BU of 4rdw by Molmil
The structure of N-formimino-L-Glutamate Iminohydrolase from Pseudomonas aeruginosa complexed with N-Guanidino-L-Glutaric acid
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
著者Fedorov, A.A, Fedorov, E.V, Marti-Arbona, R, Raushel, F.M, Almo, S.C.
登録日2014-09-19
公開日2014-10-08
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.591 Å)
主引用文献The structure of N-formimino-L-Glutamate Iminohydrolase from Pseudomonas aeruginosa complexed with N-Guanidino-L-Glutaric acid
To be Published
4REA
DownloadVisualize
BU of 4rea by Molmil
A Nuclease DNA complex
分子名称: DNA (5'-D(*TP*GP*CP*TP*CP*GP*CP*CP*AP*C)-3'), DNA (5'-D(P*CP*GP*TP*GP*GP*CP*GP*AP*GP*C)-3'), DNA (5'-D(P*GP*GP*CP*GP*AP*GP*CP*GP*CP*TP*CP*GP*CP*CP*AP*CP*G)-3'), ...
著者Zhao, Q, Xue, X, Longerich, S, Sung, P, Xiong, Y.
登録日2014-09-22
公開日2014-12-24
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.81 Å)
主引用文献Structural insights into 5' flap DNA unwinding and incision by the human FAN1 dimer.
Nat Commun, 5, 2014
3JVA
DownloadVisualize
BU of 3jva by Molmil
Crystal structure of Dipeptide Epimerase from Enterococcus faecalis V583
分子名称: Dipeptide Epimerase, GLYCEROL, MAGNESIUM ION, ...
著者Fedorov, A.A, Fedorov, E.V, Sakai, A, Imker, H, Gerlt, J.A, Almo, S.C.
登録日2009-09-16
公開日2010-08-11
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Homology models guide discovery of diverse enzyme specificities among dipeptide epimerases in the enolase superfamily.
Proc.Natl.Acad.Sci.USA, 109, 2012
7X5W
DownloadVisualize
BU of 7x5w by Molmil
Crystal structure of AtHPPD-Y18022 complex
分子名称: 1,5-dimethyl-3-naphthalen-1-yl-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
著者Lin, H.-Y, Dong, J, Yang, G.-F.
登録日2022-03-05
公開日2022-06-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.598 Å)
主引用文献Structural insights of 4-Hydrophenylpyruvate dioxygenase inhibition by structurally diverse small molecules
Adv Agrochem, 2022
3CL6
DownloadVisualize
BU of 3cl6 by Molmil
Crystal structure of Puue Allantoinase
分子名称: Puue allantoinase
著者Ramazzina, I, Cendron, L, Folli, C, Berni, R, Monteverdi, D, Zanotti, G, Percudani, R.
登録日2008-03-18
公開日2008-06-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.58 Å)
主引用文献Logical identification of an allantoinase analog (puuE) recruited from polysaccharide deacetylases
J.Biol.Chem., 283, 2008
7X5Y
DownloadVisualize
BU of 7x5y by Molmil
Crystal structure of AtHPPD-Y14240 complex
分子名称: (1R,3S)-5-methyl-2-[(1S)-2-naphthalen-1-yloxy-1-oxidanyl-ethyl]cyclohexane-1,3-diol, (4S)-2-METHYL-2,4-PENTANEDIOL, 4-hydroxyphenylpyruvate dioxygenase, ...
著者Lin, H.-Y, Dong, J, Yang, G.-F.
登録日2022-03-05
公開日2022-06-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.498 Å)
主引用文献Discovery of Subnanomolar Inhibitors of 4-Hydroxyphenylpyruvate Dioxygenase via Structure-Based Rational Design.
J.Agric.Food Chem., 71, 2023
7X69
DownloadVisualize
BU of 7x69 by Molmil
Crystal structure of AtHPPD-Y191053 complex
分子名称: 1,5-dimethyl-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-3-(4-phenylbutyl)quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
著者Lin, H.-Y, Dong, J, Yang, G.-F.
登録日2022-03-06
公開日2022-06-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.797 Å)
主引用文献Discovery of Subnanomolar Inhibitors of 4-Hydroxyphenylpyruvate Dioxygenase via Structure-Based Rational Design.
J.Agric.Food Chem., 71, 2023
5WI6
DownloadVisualize
BU of 5wi6 by Molmil
Human beta-1 tryptase mutant Ile99Cys
分子名称: L-alpha-glutamyl-N-{(1S)-4-{[amino(iminio)methyl]amino}-1-[(1S)-2-chloro-1-hydroxyethyl]butyl}glycinamide, SULFATE ION, Tryptase alpha/beta-1
著者Eigenbrot, C, Maun, H.R.
登録日2017-07-18
公開日2018-04-25
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.72 Å)
主引用文献Dual functionality of beta-tryptase protomers as both proteases and cofactors in the active tetramer.
J. Biol. Chem., 293, 2018
2J55
DownloadVisualize
BU of 2j55 by Molmil
X-ray reduced Paraccocus denitrificans methylamine dehydrogenase O- quinone in complex with amicyanin.
分子名称: AMICYANIN, COPPER (II) ION, GLYCEROL, ...
著者Pearson, A.R, Pahl, R, Davidson, V.L, Wilmot, C.M.
登録日2006-09-12
公開日2007-01-23
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Tracking X-Ray-Derived Redox Changes in Crystals of a Methylamine Dehydrogenase/Amicyanin Complex Using Single-Crystal Uv/Vis Microspectrophotometry.
J.Synchrotron Radiat., 14, 2007
7X8H
DownloadVisualize
BU of 7x8h by Molmil
Crystal structure of AtHPPD-(+)-Usnic acid complex
分子名称: (9bR)-2,6-diethanoyl-8,9b-dimethyl-3,7,9-tris(oxidanyl)dibenzofuran-1-one, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
著者Dong, J, Lin, H.-Y, Yang, G.-F.
登録日2022-03-13
公開日2022-06-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.986 Å)
主引用文献Discovery of Subnanomolar Inhibitors of 4-Hydroxyphenylpyruvate Dioxygenase via Structure-Based Rational Design.
J.Agric.Food Chem., 71, 2023
3CU9
DownloadVisualize
BU of 3cu9 by Molmil
High resolution crystal structure of 1,5-alpha-L-arabinanase from Geobacillus Stearothermophilus
分子名称: CALCIUM ION, GLYCEROL, Intracellular arabinanase
著者Alhassid, A, Ben David, A, Shoham, Y, Shoham, G.
登録日2008-04-16
公開日2009-04-21
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.06 Å)
主引用文献Crystal structure of an inverting GH 43 1,5-alpha-L-arabinanase from Geobacillus stearothermophilus complexed with its substrate
Biochem.J., 422, 2009
7X8E
DownloadVisualize
BU of 7x8e by Molmil
Crystal structure of PfHPPD-Y13287 complex
分子名称: 1,5-dimethyl-3-(2-methylphenyl)-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
著者Dong, J, Lin, H.-Y, Yang, G.-F.
登録日2022-03-12
公開日2022-06-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.749 Å)
主引用文献Structural insights of 4-Hydrophenylpyruvate dioxygenase inhibition by structurally diverse small molecules
Adv Agrochem, 2022
2IXA
DownloadVisualize
BU of 2ixa by Molmil
A-zyme, N-acetylgalactosaminidase
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, (4S)-2-METHYL-2,4-PENTANEDIOL, ALPHA-N-ACETYLGALACTOSAMINIDASE, ...
著者Sulzenbacher, G, Liu, Q.P, Bourne, Y, Henrissat, B, Clausen, H.
登録日2006-07-07
公開日2007-04-10
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Bacterial Glycosidases for the Production of Universal Red Blood Cells.
Nat.Biotechnol., 25, 2007
7X5S
DownloadVisualize
BU of 7x5s by Molmil
Crystal structure of AtHPPD-Y14157 complex
分子名称: 2-methyl-4-(2-nitro-4-piperidin-1-yl-phenyl)carbonyl-5-phenyl-1H-pyrazol-3-one, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
著者Lin, H.-Y, Dong, J, Yang, G.-F.
登録日2022-03-05
公開日2022-06-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.706 Å)
主引用文献Structural insights of 4-Hydrophenylpyruvate dioxygenase inhibition by structurally diverse small molecules
Adv Agrochem, 2022
2J4S
DownloadVisualize
BU of 2j4s by Molmil
P450 BM3 heme domain in complex with DMSO
分子名称: BIFUNCTIONAL P-450:NADPH-P450 REDUCTASE, DI(HYDROXYETHYL)ETHER, PROTOPORPHYRIN IX CONTAINING FE, ...
著者Kuper, J, Tuck-Seng, W, Roccatano, D, Wilmanns, M, Schwaneberg, U.
登録日2006-09-05
公開日2007-05-15
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Understanding a Mechanism of Organic Cosolvent Inactivation in Heme Monooxygenase P450 Bm-3.
J.Am.Chem.Soc., 129, 2007
7X5X
DownloadVisualize
BU of 7x5x by Molmil
Crystal structure of AtHPPD-YH20533 complex
分子名称: 2-methylsulfonyl-N-(1-methyl-1,2,3,4-tetrazol-5-yl)-4-(trifluoromethyl)benzamide, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
著者Lin, H.-Y, Dong, J, Yang, G.-F.
登録日2022-03-05
公開日2022-06-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.196 Å)
主引用文献Structural insights of 4-Hydrophenylpyruvate dioxygenase inhibition by structurally diverse small molecules
Adv Agrochem, 2022
5WIZ
DownloadVisualize
BU of 5wiz by Molmil
Phosphotriesterase variant S5
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CACODYLATE ION, Phosphotriesterase, ...
著者Miton, C.M, Campbell, E.C, Jackson, C.J, Tokuriki, N.
登録日2017-07-21
公開日2019-01-23
実験手法X-RAY DIFFRACTION (1.96 Å)
主引用文献Phosphotriesterase variant S5
To Be Published
4L3H
DownloadVisualize
BU of 4l3h by Molmil
Crystal Structure of the E113Q-MauG/pre-Methylamine Dehydrogenase Complex After Treatment with Hydrogen Peroxide
分子名称: 1,2-ETHANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, ...
著者Yukl, E.T, Wilmot, C.M.
登録日2013-06-05
公開日2013-09-04
最終更新日2023-12-06
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Carboxyl Group of Glu113 Is Required for Stabilization of the Diferrous and Bis-Fe(IV) States of MauG.
Biochemistry, 52, 2013
7X5Z
DownloadVisualize
BU of 7x5z by Molmil
Crystal structure of AtHPPD-Y13162 complex
分子名称: 1-methyl-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-3-phenyl-quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
著者Lin, H.-Y, Dong, J, Yang, G.-F.
登録日2022-03-05
公開日2022-06-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.688 Å)
主引用文献Discovery of Subnanomolar Inhibitors of 4-Hydroxyphenylpyruvate Dioxygenase via Structure-Based Rational Design.
J.Agric.Food Chem., 71, 2023
5WJA
DownloadVisualize
BU of 5wja by Molmil
Crystal structure of H107A peptidylglycine alpha-hydroxylating monooxygenase (PHM) in complex with citrate
分子名称: CITRATE ANION, COPPER (II) ION, GLYCEROL, ...
著者Maheshwari, S, Rudzka, K, Gabelli, S.B, Amzel, L.M.
登録日2017-07-21
公開日2018-07-18
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Effects of copper occupancy on the conformational landscape of peptidylglycine alpha-hydroxylating monooxygenase.
Commun Biol, 1, 2018
7X67
DownloadVisualize
BU of 7x67 by Molmil
Crystal structure of AtHPPD-Y18406 complex
分子名称: 1,5-dimethyl-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-3-(3-phenylpropyl)quinazoline-2,4-dione, 4-hydroxyphenylpyruvate dioxygenase, COBALT (II) ION
著者Lin, H.-Y, Dong, J, Yang, G.-F.
登録日2022-03-06
公開日2022-06-01
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.996 Å)
主引用文献Discovery of Subnanomolar Inhibitors of 4-Hydroxyphenylpyruvate Dioxygenase via Structure-Based Rational Design.
J.Agric.Food Chem., 71, 2023

224004

件を2024-08-21に公開中

PDB statisticsPDBj update infoContact PDBjnumon