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2CT1
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Solution Structure of the zinc finger domain of Transcriptional repressor CTCF protein
分子名称: Transcriptional repressor CTCF, ZINC ION
著者Miyamoto, K, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-23
公開日2005-11-23
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution Structure of the zinc finger domain of Transcriptional repressor CTCF protein
To be Published
2CSH
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BU of 2csh by Molmil
Solution structure of tandem repeat of the zf-C2H2 domains of human zinc finger protein 297B
分子名称: ZINC ION, Zinc finger protein 297B
著者Inoue, K, Saitoh, K, Hayashi, F, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-21
公開日2005-11-21
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of tandem repeat of the zf-C2H2 domains of human zinc finger protein 297B
To be Published
2COT
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BU of 2cot by Molmil
Solution structure of the first and second zf-C2H2 domain of Zinc finger protein 435
分子名称: ZINC ION, Zinc finger protein 435
著者Qin, X.R, Nagashima, T, Hayashi, F, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-18
公開日2005-11-18
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the first and second zf-C2H2 domain of Zinc finger protein 435
To be published
1X5W
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BU of 1x5w by Molmil
Solution structure of the C2H2 type zinc-binding domain of human zinc finger protein 64, isoforms 1 and 2
分子名称: ZINC ION, Zinc finger protein 64, isoforms 1
著者Yoneyama, M, Koshiba, S, Tochio, N, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-17
公開日2005-11-17
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the C2H2 type zinc-binding domain of human zinc finger protein 64, isoforms 1 and 2
To be Published
1X6E
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BU of 1x6e by Molmil
Solution structures of the C2H2 type zinc finger domain of human Zinc finger protein 24
分子名称: ZINC ION, Zinc finger protein 24
著者Sato, M, Tomizawa, T, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-17
公開日2005-11-17
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structures of the C2H2 type zinc finger domain of human Zinc finger protein 24
To be Published
1X6H
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BU of 1x6h by Molmil
Solution structures of the C2H2 type zinc finger domain of human Transcriptional repressor CTCF
分子名称: Transcriptional repressor CTCF, ZINC ION
著者Sato, M, Saito, K, Koshiba, S, Inoue, M, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2005-05-17
公開日2005-11-17
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structures of the C2H2 type zinc finger domain of human Transcriptional repressor CTCF
To be Published
1U86
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BU of 1u86 by Molmil
321-TW-322 insertion mutant of the third zinc finger of BKLF
分子名称: Kruppel-like factor 3, ZINC ION
著者Cram, E.D, Mackay, J.P, Matthews, J.M.
登録日2004-08-05
公開日2005-08-23
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structures of tryptophan-containing CCHH zinc finger mutants
To be Published
1U85
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BU of 1u85 by Molmil
ARG326-TRP mutant of the third zinc finger of BKLF
分子名称: Kruppel-like factor 3, ZINC ION
著者Cram, E.D, Mackay, J.P, Matthews, J.M.
登録日2004-08-05
公開日2005-08-23
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structures of tryptophan-containing CCHH zinc finger mutants
To be Published
1VA2
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BU of 1va2 by Molmil
Solution Structure of Transcription Factor Sp1 DNA Binding Domain (Zinc Finger 2)
分子名称: Transcription factor Sp1, ZINC ION
著者Oka, S, Shiraishi, Y, Yoshida, T, Ohkubo, T, Sugiura, Y, Kobayashi, Y.
登録日2004-02-07
公開日2005-02-08
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献NMR structure of transcription factor Sp1 DNA binding domain
Biochemistry, 43, 2004
1VA3
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BU of 1va3 by Molmil
Solution Structure of Transcription Factor Sp1 DNA Binding Domain (Zinc Finger 3)
分子名称: Transcription factor Sp1, ZINC ION
著者Oka, S, Shiraishi, Y, Yoshida, T, Ohkubo, T, Sugiura, Y, Kobayashi, Y.
登録日2004-02-07
公開日2005-02-08
最終更新日2023-12-27
実験手法SOLUTION NMR
主引用文献NMR structure of transcription factor Sp1 DNA binding domain
Biochemistry, 43, 2004
1XF7
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BU of 1xf7 by Molmil
High Resolution NMR Structure of the Wilms' Tumor Suppressor Protein (WT1) Finger 3
分子名称: Wilms' Tumor Protein, ZINC ION
著者Lachenmann, M.J, Ladbury, J.E, Dong, J, Huang, K, Carey, P, Weiss, M.A.
登録日2004-09-14
公開日2004-12-14
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Why zinc fingers prefer zinc: ligand-field symmetry and the hidden thermodynamics of metal ion selectivity
Biochemistry, 43, 2004
1P7A
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BU of 1p7a by Molmil
Solution Structure of the Third Zinc Finger from BKLF
分子名称: Kruppel-like factor 3, ZINC ION
著者Simpson, R.J.Y, Cram, E.D, Czolij, R, Matthews, J.M, Crossley, M, Mackay, J.P.
登録日2003-04-30
公開日2003-12-30
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献CCHX zinc finger derivatives retain the ability to bind Zn(II) and mediate protein-DNA interactions.
J.Biol.Chem., 278, 2003
1UN6
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BU of 1un6 by Molmil
THE CRYSTAL STRUCTURE OF A ZINC FINGER - RNA COMPLEX REVEALS TWO MODES OF MOLECULAR RECOGNITION
分子名称: 5S RIBOSOMAL RNA, MAGNESIUM ION, TRANSCRIPTION FACTOR IIIA, ...
著者Lu, D, Searles, M.A, Klug, A.
登録日2003-09-04
公開日2003-11-20
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Crystal Structure of a Zinc-Finger-RNA Complex Reveals Two Modes of Molecular Recognition
Nature, 426, 2003
1LLM
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BU of 1llm by Molmil
Crystal Structure of a Zif23-GCN4 Chimera Bound to DNA
分子名称: 5'-D(*TP*CP*CP*CP*AP*CP*GP*CP*GP*TP*GP*GP*G)-3', ZINC ION, chimera of Zif23-GCN4
著者Wolfe, S.A, Grant, R.A, Pabo, C.O.
登録日2002-04-29
公開日2003-09-30
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structure of a designed dimeric zinc finger protein bound to DNA.
Biochemistry, 42, 2003
1P47
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Crystal Structure of tandem Zif268 molecules complexed to DNA
分子名称: 5'-D(*CP*AP*CP*GP*CP*CP*CP*AP*CP*GP*CP*CP*GP*CP*CP*CP*AP*CP*GP*CP*CP*A)-3', 5'-D(*GP*TP*GP*GP*CP*GP*TP*GP*GP*GP*CP*GP*GP*CP*GP*TP*GP*GP*GP*CP*GP*T)-3', Early growth response protein 1, ...
著者Peisach, E, Pabo, C.O.
登録日2003-04-21
公開日2003-06-24
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Constraints for Zinc Finger Linker Design as Inferred from X-ray Crystal Structure of Tandem Zif268-DNA Complexes
J.Mol.Biol., 330, 2003
1JK2
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BU of 1jk2 by Molmil
Zif268 D20A mutant bound to the GCT DNA site
分子名称: 5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*CP*TP*G)-3', 5'-D(*TP*CP*AP*GP*CP*CP*CP*AP*CP*GP*C)-3', ZIF268, ...
著者Miller, J.C, Pabo, C.O.
登録日2001-07-11
公開日2001-10-19
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Rearrangement of side-chains in a Zif268 mutant highlights the complexities of zinc finger-DNA recognition.
J.Mol.Biol., 313, 2001
1JK1
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Zif268 D20A Mutant Bound to WT DNA Site
分子名称: 5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*CP*GP*G)-3', 5'-D(*TP*CP*CP*GP*CP*CP*CP*AP*CP*GP*C)-3', ZIF268, ...
著者Miller, J.C, Pabo, C.O.
登録日2001-07-11
公開日2001-10-19
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Rearrangement of side-chains in a Zif268 mutant highlights the complexities of zinc finger-DNA recognition.
J.Mol.Biol., 313, 2001
1F2I
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COCRYSTAL STRUCTURE OF SELECTED ZINC FINGER DIMER BOUND TO DNA
分子名称: 5'-D(*AP*TP*GP*GP*GP*CP*GP*CP*GP*CP*CP*CP*AP*T)-3', FUSION OF N-TERMINAL 17-MER PEPTIDE EXTENSION TO ZIF12, ZINC ION
著者Wang, B.S, Grant, R.A, Pabo, C.O.
登録日2000-05-25
公開日2001-09-14
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Selected peptide extension contacts hydrophobic patch on neighboring zinc finger and mediates dimerization on DNA.
Nat.Struct.Biol., 8, 2001
1G2F
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BU of 1g2f by Molmil
STRUCTURE OF A CYS2HIS2 ZINC FINGER/TATA BOX COMPLEX (TATAZF;CLONE #6)
分子名称: 5'-D(*GP*AP*CP*GP*CP*TP*AP*TP*AP*AP*AP*AP*GP*GP*AP*G)-3', 5'-D(*TP*CP*CP*TP*TP*TP*TP*AP*TP*AP*GP*CP*GP*TP*CP*C)-3', TATA BOX ZINC FINGER PROTEIN, ...
著者Wolfe, S.A, Grant, R.A, Elrod-Erickson, M, Pabo, C.O.
登録日2000-10-18
公開日2001-09-07
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Beyond the "recognition code": structures of two Cys2His2 zinc finger/TATA box complexes.
Structure, 9, 2001
1G2D
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BU of 1g2d by Molmil
STRUCTURE OF A CYS2HIS2 ZINC FINGER/TATA BOX COMPLEX (CLONE #2)
分子名称: 5'-D(*GP*AP*CP*GP*CP*TP*AP*TP*AP*AP*AP*AP*GP*GP*AP*G)-3', 5'-D(*TP*CP*CP*TP*TP*TP*TP*AP*TP*AP*GP*CP*GP*TP*CP*C)-3', TATA BOX ZINC FINGER PROTEIN, ...
著者Wolfe, S.A, Grant, R.A, Elrod-Erickson, M, Pabo, C.O.
登録日2000-10-18
公開日2001-09-07
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Beyond the "recognition code": structures of two Cys2His2 zinc finger/TATA box complexes.
Structure, 9, 2001
1TF6
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CO-CRYSTAL STRUCTURE OF XENOPUS TFIIIA ZINC FINGER DOMAIN BOUND TO THE 5S RIBOSOMAL RNA GENE INTERNAL CONTROL REGION
分子名称: DNA (5'-D(*AP*CP*GP*GP*GP*CP*CP*TP*GP*GP*TP*TP*AP*GP*TP*AP*C P*CP*TP*GP*GP*AP* TP*GP*GP*GP*AP*GP*AP*CP*C)-3'), DNA (5'-D(*TP*GP*GP*TP*CP*TP*CP*CP*CP*AP*TP*CP*CP*AP*GP*GP*T P*AP*CP*TP*AP*AP* CP*CP*AP*GP*GP*CP*CP*CP*G)-3'), PROTEIN (TRANSCRIPTION FACTOR IIIA), ...
著者Nolte, R.T, Conlin, R.M, Harrison, S.C, Brown, R.S.
登録日1998-03-02
公開日1998-07-10
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Differing roles for zinc fingers in DNA recognition: structure of a six-finger transcription factor IIIA complex.
Proc.Natl.Acad.Sci.USA, 95, 1998
1A1J
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RADR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GCGT SITE)
分子名称: DNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*CP*GP*T)-3'), DNA (5'-D(*TP*AP*CP*GP*CP*CP*CP*AP*CP*GP*C)-3'), PROTEIN (RADR ZIF268 ZINC FINGER PEPTIDE), ...
著者Elrod-Erickson, M, Benson, T.E, Pabo, C.O.
登録日1997-12-10
公開日1998-06-17
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献High-resolution structures of variant Zif268-DNA complexes: implications for understanding zinc finger-DNA recognition.
Structure, 6, 1998
1A1I
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RADR (ZIF268 VARIANT) ZINC FINGER-DNA COMPLEX (GCAC SITE)
分子名称: DNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*CP*AP*C)-3'), DNA (5'-D(*TP*GP*TP*GP*CP*CP*CP*AP*CP*GP*C)-3'), RADR ZIF268 ZINC FINGER PEPTIDE, ...
著者Elrod-Erickson, M, Benson, T.E, Pabo, C.O.
登録日1997-12-10
公開日1998-06-17
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献High-resolution structures of variant Zif268-DNA complexes: implications for understanding zinc finger-DNA recognition.
Structure, 6, 1998
1A1L
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ZIF268 ZINC FINGER-DNA COMPLEX (GCAC SITE)
分子名称: DNA (5'-D(*AP*GP*CP*GP*TP*GP*GP*GP*CP*AP*C)-3'), DNA (5'-D(*TP*GP*TP*GP*CP*CP*CP*AP*CP*GP*C)-3'), PROTEIN (ZIF268 ZINC FINGER PEPTIDE), ...
著者Elrod-Erickson, M, Benson, T.E, Pabo, C.O.
登録日1997-12-10
公開日1998-06-17
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献High-resolution structures of variant Zif268-DNA complexes: implications for understanding zinc finger-DNA recognition.
Structure, 6, 1998
2ADR
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ADR1 DNA-BINDING DOMAIN FROM SACCHAROMYCES CEREVISIAE, NMR, 25 STRUCTURES
分子名称: ADR1, ZINC ION
著者Bowers, P.M, Kleivt, R.E.
登録日1998-03-20
公開日1998-06-17
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献A folding transition and novel zinc finger accessory domain in the transcription factor ADR1.
Nat.Struct.Biol., 6, 1999

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