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3NS6
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Crystal structure of hte RNA recognition motif of yeast eIF3b residues 76-170
分子名称: Eukaryotic translation initiation factor 3 subunit B, SULFATE ION
著者Khoshnevis, S, Neumann, P, Ficner, R.
登録日2010-07-01
公開日2010-10-06
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.25 Å)
主引用文献Crystal structure of the RNA recognition motif of yeast translation initiation factor eIF3b reveals differences to human eIF3b.
Plos One, 5, 2010
3MDF
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BU of 3mdf by Molmil
Crystal structure of the RRM domain of Cyclophilin 33
分子名称: Peptidyl-prolyl cis-trans isomerase E
著者Hom, R.A, Chang, P.Y, Roy, S, Mussleman, C.A, Glass, K.C, Seleznevia, A.I, Gozani, O, Ismagilov, R.F, Cleary, M.L, Kutateladze, T.G.
登録日2010-03-30
公開日2010-05-12
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Molecular mechanism of MLL PHD3 and RNA recognition by the Cyp33 RRM domain.
J.Mol.Biol., 400, 2010
3MD1
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Crystal Structure of the Second RRM Domain of Yeast Poly(U)-Binding Protein (Pub1)
分子名称: GLYCEROL, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1
著者Li, H, Shi, H, Li, Y, Cui, Y, Niu, L, Teng, M.
登録日2010-03-29
公開日2010-05-05
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Crystal Structure of the Second RRM Domain of Yeast Poly(U)-Binding Protein (Pub1)
To be published
3NS5
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Crystal structure of the RNA recognition motif of yeast eIF3b residues 76-161
分子名称: Eukaryotic translation initiation factor 3 subunit B
著者Khoshnevis, S, Neumann, P, Ficner, R.
登録日2010-07-01
公開日2010-10-06
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.598 Å)
主引用文献Crystal structure of the RNA recognition motif of yeast translation initiation factor eIF3b reveals differences to human eIF3b.
Plos One, 5, 2010
3MD3
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BU of 3md3 by Molmil
Crystal Structure of the First Two RRM Domains of Yeast Poly(U) Binding Protein (Pub1)
分子名称: GLYCEROL, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, SULFATE ION
著者Li, H, Shi, H, Zhu, Z, Wang, H, Niu, L, Teng, M.
登録日2010-03-29
公開日2010-05-05
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Crystal Structure of the First Two RRM Domains of Yeast Poly(U) Binding Protein (Pub1)
To be published
2A3J
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Structure of URNdesign, a complete computational redesign of human U1A protein
分子名称: U1 small nuclear ribonucleoprotein A
著者Varani, G, Dobson, N, Dantas, G, Baker, D.
登録日2005-06-24
公開日2006-06-06
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献High-Resolution Structural Validation of the Computational Redesign of Human U1A Protein
Structure, 14, 2006
3NNC
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Crystal Structure of CUGBP1 RRM1/2-RNA Complex
分子名称: CUGBP Elav-like family member 1, RNA (5'-R(*UP*GP*UP*GP*UP*GP*UP*UP*GP*UP*GP*UP*G)-3')
著者Teplova, M, Song, J, Gaw, H, Teplov, A, Patel, D.J.
登録日2010-06-23
公開日2010-10-27
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.2005 Å)
主引用文献Structural Insights into RNA Recognition by the Alternate-Splicing Regulator CUG-Binding Protein 1.
Structure, 18, 2010
3NNH
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Crystal Structure of the CUGBP1 RRM1 with GUUGUUUUGUUU RNA
分子名称: CUGBP Elav-like family member 1, RNA (5'-R(*GP*UP*UP*GP*UP*UP*UP*UP*GP*UP*UP*U)-3')
著者Teplova, M, Song, J, Gaw, H, Teplov, A, Patel, D.J.
登録日2010-06-23
公開日2010-10-27
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.7501 Å)
主引用文献Structural Insights into RNA Recognition by the Alternate-Splicing Regulator CUG-Binding Protein 1.
Structure, 18, 2010
1ZZN
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Crystal structure of a group I intron/two exon complex that includes all catalytic metal ion ligands.
分子名称: 197-MER, 5'-R(*AP*AP*GP*CP*CP*AP*CP*AP*CP*AP*AP*AP*CP*CP*AP*GP*AP*CP*GP*GP*CP*C)-3', 5'-R(*CP*AP*(5MU))-3', ...
著者Stahley, M.R, Strobel, S.A.
登録日2005-06-14
公開日2005-08-30
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (3.37 Å)
主引用文献Structural evidence for a two-metal-ion mechanism of group I intron splicing.
Science, 309, 2005
3MXH
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Native structure of a c-di-GMP riboswitch from V. cholerae
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), MAGNESIUM ION, U1 small nuclear ribonucleoprotein A, ...
著者Strobel, S.A, Smith, K.D.
登録日2010-05-07
公開日2010-08-25
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural and biochemical determinants of ligand binding by the c-di-GMP riboswitch .
Biochemistry, 49, 2010
3MUT
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Crystal Structure of the G20A/C92U mutant c-di-GMP riboswith bound to c-di-GMP
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), G20A/C92U mutant c-di-GMP riboswitch, MAGNESIUM ION, ...
著者Strobel, S.A, Smith, K.D.
登録日2010-05-03
公開日2010-08-25
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural and biochemical determinants of ligand binding by the c-di-GMP riboswitch .
Biochemistry, 49, 2010
3MUR
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Crystal Structure of the C92U mutant c-di-GMP riboswith bound to c-di-GMP
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), C92U mutant c-di-GMP riboswitch, MAGNESIUM ION, ...
著者Strobel, S.A, Smith, K.D.
登録日2010-05-03
公開日2010-08-25
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structural and biochemical determinants of ligand binding by the c-di-GMP riboswitch .
Biochemistry, 49, 2010
3MUM
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Crystal Structure of the G20A mutant c-di-GMP riboswith bound to c-di-GMP
分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), G20A mutant c-di-GMP Riboswitch, MAGNESIUM ION, ...
著者Strobel, S.A, Smith, K.D.
登録日2010-05-03
公開日2010-08-25
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献Structural and biochemical determinants of ligand binding by the c-di-GMP riboswitch .
Biochemistry, 49, 2010
3MUV
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BU of 3muv by Molmil
Crystal Structure of the G20A/C92U mutant c-di-GMP riboswith bound to c-di-AMP
分子名称: (2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide, G20A/C92U mutant c-di-GMP riboswitch, MAGNESIUM ION, ...
著者Strobel, S.A, Smith, K.D.
登録日2010-05-03
公開日2010-08-25
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.2 Å)
主引用文献Structural and biochemical determinants of ligand binding by the c-di-GMP riboswitch .
Biochemistry, 49, 2010
3P49
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Crystal Structure of a Glycine Riboswitch from Fusobacterium nucleatum
分子名称: GLYCINE, GLYCINE RIBOSWITCH, MAGNESIUM ION, ...
著者Butler, E.B, Wang, J, Xiong, Y, Strobel, S.
登録日2010-10-06
公開日2011-04-06
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (3.55 Å)
主引用文献Structural basis of cooperative ligand binding by the glycine riboswitch.
Chem.Biol., 18, 2011
2RNE
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BU of 2rne by Molmil
Solution structure of the second RNA recognition motif (RRM) of TIA-1
分子名称: Tia1 protein
著者Takahashi, M, Kuwasako, K, Abe, C, Tsuda, K, Inoue, M, Terada, T, Shirouzu, M, Kobayashi, N, Kigawa, T, Taguchi, S, Guntert, P, Hayashizaki, Y, Tanaka, A, Muto, Y, Yokoyama, S.
登録日2007-12-19
公開日2008-11-04
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the second RNA recognition motif (RRM) domain of murine T cell intracellular antigen-1 (TIA-1) and its RNA recognition mode
Biochemistry, 47, 2008
2RS8
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Solution structure of the N-terminal RNA recognition motif of NonO
分子名称: Non-POU domain-containing octamer-binding protein
著者Nagata, T, Muto, Y, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2011-11-29
公開日2012-12-19
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Solution structure of the N-terminal RNA recognition motif of NonO
To be Published
2RS2
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1H, 13C, and 15N Chemical Shift Assignments for Musashi1 RBD1:r(GUAGU) complex
分子名称: RNA (5'-R(*GP*UP*AP*GP*U)-3'), RNA-binding protein Musashi homolog 1
著者Ohyama, T, Nagata, T, Tsuda, K, Imai, T, Okano, H, Yamazaki, T, Katahira, M.
登録日2011-06-27
公開日2011-12-28
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structure of Musashi1 in a complex with target RNA: the role of aromatic stacking interactions
Nucleic Acids Res., 2011
2RRA
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Solution structure of RNA binding domain in human Tra2 beta protein in complex with RNA (GAAGAA)
分子名称: 5'-R(*GP*AP*AP*GP*AP*A)-3', cDNA FLJ40872 fis, clone TUTER2000283, ...
著者Tsuda, K, Kuwasako, K, Takahashi, M, Someya, T, Inoue, M, Kigawa, T, Terada, T, Shirouzu, M, Sugano, S, Muto, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2010-06-17
公開日2011-04-27
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structural basis for the dual RNA-recognition modes of human Tra2-beta RRM.
Nucleic Acids Res., 39, 2011
6Z29
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Structure of eIF4G1 (37-49) - PUB1 RRM3 chimera in solution
分子名称: Eukaryotic initiation factor 4F subunit p150,Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1
著者Chaves-Arquero, B, Martinez-Lumbreras, S, Perez-Canadillas, J.M.
登録日2020-05-15
公開日2021-05-26
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献eIF4G1 N-terminal intrinsically disordered domain is a multi-docking station for RNA, Pab1, Pub1, and self-assembly.
Front Mol Biosci, 9, 2022
2RQ4
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Refinement of RNA binding domain 3 in CUG triplet repeat RNA-binding protein 1
分子名称: CUG-BP- and ETR-3-like factor 1
著者Tsuda, K, Kuwasako, K, Takahashi, M, Someya, T, Inoue, M, Terada, T, Kobayashi, N, Shirouzu, M, Kigawa, T, Guntert, P, Muto, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2009-01-19
公開日2009-08-04
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Structural basis for the sequence-specific RNA-recognition mechanism of human CUG-BP1 RRM3
Nucleic Acids Res., 2009
2SXL
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SEX-LETHAL RBD1, NMR, MINIMIZED AVERAGE STRUCTURE
分子名称: SEX-LETHAL PROTEIN
著者Inoue, M, Muto, Y, Sakamoto, H, Kigawa, T, Takio, K, Shimura, Y, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日1997-07-16
公開日1998-07-22
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献A characteristic arrangement of aromatic amino acid residues in the solution structure of the amino-terminal RNA-binding domain of Drosophila sex-lethal.
J.Mol.Biol., 272, 1997
2UP1
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STRUCTURE OF UP1-TELOMERIC DNA COMPLEX
分子名称: DNA (5'-D(P*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*G)-3'), PROTEIN (HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN A1)
著者Ding, J, Hayashi, M.K, Krainer, A.R, Xu, R.-M.
登録日1998-07-10
公開日1999-11-10
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of the two-RRM domain of hnRNP A1 (UP1) complexed with single-stranded telomeric DNA.
Genes Dev., 13, 1999
2RT3
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Solution structure of the second RRM domain of Nrd1
分子名称: Negative regulator of differentiation 1
著者Kobayashi, A, Kanaba, T, Mishima, M.
登録日2013-04-16
公開日2014-04-16
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structure of the second RRM domain of Nrd1, a fission yeast MAPK target RNA binding protein, and implication for its RNA recognition and regulation
Biochem.Biophys.Res.Commun., 437, 2013
5M8I
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Solution structure of CUG-BP2 RRM3 in complex with 5'-UUUAA-3' RNA
分子名称: CUGBP Elav-like family member 2, RNA (5'-R(*UP*UP*UP*AP*A)-3')
著者Diarra dit Konte, N, Damberger, F.F, Allain, F.H.T.
登録日2016-10-28
公開日2017-10-11
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Aromatic side-chain conformational switch on the surface of the RNA Recognition Motif enables RNA discrimination.
Nat Commun, 8, 2017

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