PDB: 338 件ウェブページステータス検索Chemie searchBIRD

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5UCG	Structure of the PP2C Phosphatase Domain and a Fragment of the Regulatory Domain of the Cell Fate Determinant SpoIIE from Bacillus Subtilis 分子名称: Stage II sporulation protein E 著者 Bradshaw, N, Levdikov, V, Zimanyi, C, Gaudet, R, Wilkinson, A, Losick, R. 登録日 2016-12-22 公開日 2017-05-31 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (3.906 Å) 主引用文献 A widespread family of serine/threonine protein phosphatases shares a common regulatory switch with proteasomal proteases. Elife, 6, 2017
5MQH	Structure of the Phosphatase Domain of the Cell Fate Determinant SpoIIE from Bacillus subtilis in a crystal form without domain swapping 分子名称: Serine phosphatase 著者 Levdikov, V.M, Wilkinson, A.J, Blagova, E.V. 登録日 2016-12-20 公開日 2017-05-31 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (2.45 Å) 主引用文献 A widespread family of serine/threonine protein phosphatases shares a common regulatory switch with proteasomal proteases. Elife, 6, 2017
6EYC	Re-refinement of the MCM2-7 double hexamer using ISOLDE 分子名称: ADENOSINE-5'-DIPHOSPHATE, DNA replication licensing factor MCM2, DNA replication licensing factor MCM3, ... 著者 Croll, T.I. 登録日 2017-11-11 公開日 2018-06-20 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 ISOLDE: a physically realistic environment for model building into low-resolution electron-density maps. Acta Crystallogr D Struct Biol, 74, 2018
1ZY6	Membrane-bound dimer structure of Protegrin-1 (PG-1), a beta-Hairpin Antimicrobial Peptide in Lipid Bilayers from Rotational-Echo Double-Resonance Solid-State NMR 分子名称: Protegrin 1 著者 Wu, X, Mani, R, Tang, M, Buffy, J.J, Waring, A.J, Sherman, M.A, Hong, M. 登録日 2005-06-09 公開日 2006-06-13 最終更新日 2024-11-13 実験手法 SOLID-STATE NMR 主引用文献 Membrane-Bound Dimer Structure of a beta-Hairpin Antimicrobial Peptide from Rotational-Echo Double-Resonance Solid-State NMR. Biochemistry, 45, 2006
6ZXM	Diguanylate cyclase DgcR in complex with c-di-GMP 分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), MAGNESIUM ION, Putative GGDEF/response regulator receiver domain protein 著者 Teixeira, R.D, Schirmer, T. 登録日 2020-07-29 公開日 2021-03-31 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (3.3 Å) 主引用文献 Activation mechanism of a small prototypic Rec-GGDEF diguanylate cyclase. Nat Commun, 12, 2021
6ZXC	Diguanylate cyclase DgcR (I-site mutant) in activated state 分子名称: 3'-DEOXY-GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Putative GGDEF/response regulator receiver domain protein 著者 Teixeira, R.D, Schirmer, T. 登録日 2020-07-29 公開日 2021-03-31 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Activation mechanism of a small prototypic Rec-GGDEF diguanylate cyclase. Nat Commun, 12, 2021
6ZXB	Diguanylate cyclase DgcR (I-site mutant) in native state 分子名称: 1,2-ETHANEDIOL, 3'-DEOXY-GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... 著者 Teixeira, R.D, Schirmer, T. 登録日 2020-07-29 公開日 2021-03-31 最終更新日 2024-01-31 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Activation mechanism of a small prototypic Rec-GGDEF diguanylate cyclase. Nat Commun, 12, 2021
3E6R	Crystal structure of apo-ferritin from Pseudo-nitzschia multiseries 分子名称: Ferritin, SULFATE ION 著者 Murphy, M.E.P, Arrieta, A.L. 登録日 2008-08-15 公開日 2008-11-25 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Ferritin is used for iron storage in bloom-forming marine pennate diatoms. Nature, 457, 2009
3E6S	Crystal structure of ferritin soaked with iron from Pseudo-nitzschia multiseries 分子名称: FE (III) ION, Ferritin, SULFATE ION 著者 Murphy, M.E.P, Arrieta, A.L. 登録日 2008-08-15 公開日 2008-11-25 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Ferritin is used for iron storage in bloom-forming marine pennate diatoms. Nature, 457, 2009
2JTI	Solution structure of the yeast iso-1-cytochrome c (T12A) : yeast cytochrome c peroxidase complex 分子名称: Cytochrome c iso-1, Cytochrome c peroxidase, mitochondrial, ... 著者 Ubbink, M, Volkov, A.N. 登録日 2007-08-01 公開日 2008-07-22 最終更新日 2024-10-30 実験手法 SOLUTION NMR 主引用文献 Shifting the equilibrium between the encounter state and the specific form of a protein complex by interfacial point mutations. J.Am.Chem.Soc., 132, 2010
5IUL	Crystal structure of the DesK-DesR complex in the phosphotransfer state with high Mg2+ (150 mM) and BeF3 分子名称: MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, POTASSIUM ION, ... 著者 Trajtenberg, F, Imelio, J.A, Larrieux, N, Buschiazzo, A. 登録日 2016-03-18 公開日 2016-12-21 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (3.153 Å) 主引用文献 Regulation of signaling directionality revealed by 3D snapshots of a kinase:regulator complex in action. Elife, 5, 2016
5IUJ	Crystal structure of the DesK-DesR complex in the phosphotransfer state with low Mg2+ (20 mM) 分子名称: MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, POTASSIUM ION, ... 著者 Trajtenberg, F, Imelio, J.A, Larrieux, N, Buschiazzo, A. 登録日 2016-03-18 公開日 2016-12-21 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Regulation of signaling directionality revealed by 3D snapshots of a kinase:regulator complex in action. Elife, 5, 2016
5IUK	Crystal structure of the DesK-DesR complex in the phosphotransfer state with high Mg2+ (150 mM) 分子名称: MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, POTASSIUM ION, ... 著者 Trajtenberg, F, Imelio, J.A, Larrieux, N, Buschiazzo, A. 登録日 2016-03-18 公開日 2016-12-21 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Regulation of signaling directionality revealed by 3D snapshots of a kinase:regulator complex in action. Elife, 5, 2016
5IUM	Crystal structure of phosphorylated DesKC 分子名称: GLYCEROL, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ... 著者 Trajtenberg, F, Buschiazzo, A. 登録日 2016-03-18 公開日 2016-12-21 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (3.162 Å) 主引用文献 Regulation of signaling directionality revealed by 3D snapshots of a kinase:regulator complex in action. Elife, 5, 2016
4POY	Engineered Dual Specific VHH antibody 分子名称: VHH-metal 著者 Fanning, S.W, Walter, R, Horn, J.R. 登録日 2014-02-26 公開日 2014-09-24 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Structural basis of an engineered dual-specific antibody: conformational diversity leads to a hypervariable loop metal-binding site. Protein Eng.Des.Sel., 27, 2014
4PPT	Engineered Dual Specific VHH Antibody in Complex with a Nickel (II) Ion 分子名称: Engineered single domain VHH antibody, NICKEL (II) ION, SULFATE ION 著者 Fanning, S.W, Walter, R, Horn, J.R. 登録日 2014-02-27 公開日 2014-09-03 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Structural basis of an engineered dual-specific antibody: conformational diversity leads to a hypervariable loop metal-binding site. Protein Eng.Des.Sel., 27, 2014
4RYF	ClpP1/2 heterocomplex from Listeria monocytogenes 分子名称: ATP-dependent Clp protease proteolytic subunit, MALONATE ION, SODIUM ION 著者 Dahmen, M, Vielberg, M.-T, Groll, M, Sieber, S.A. 登録日 2014-12-15 公開日 2014-12-31 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.8 Å) 主引用文献 Structure and mechanism of the caseinolytic protease ClpP1/2 heterocomplex from Listeria monocytogenes. Angew.Chem.Int.Ed.Engl., 54, 2015
3PMI	PWWP Domain of Human Mutated Melanoma-Associated Antigen 1 分子名称: DI(HYDROXYETHYL)ETHER, PWWP domain-containing protein MUM1, SULFATE ION, ... 著者 Lam, R, Zeng, H, Loppnau, P, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Bochkarev, A, Min, J, Wu, H, Structural Genomics Consortium (SGC) 登録日 2010-11-17 公開日 2010-12-15 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (2.82 Å) 主引用文献 Structural and histone binding ability characterizations of human PWWP domains. Plos One, 6, 2011
2L9G	Solution structure of AS1p-Tar in 10% negatively charged bicelles 分子名称: Methyl-accepting chemotaxis protein II 著者 Unnerstale, S, von Heijne, G, Draheim, R.R, Maler, L. 登録日 2011-02-09 公開日 2011-09-14 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Structural characterization of AS1-membrane interactions from a subset of HAMP domains Biochim.Biophys.Acta, 1808, 2011
2N9U	Solution NMR structure of Erythrobacter litoralis PhyR response regulator REC domain 分子名称: Response regulator 著者 Correa, F, Gardner, K.H. 登録日 2015-12-09 公開日 2016-09-07 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Basis of Mutual Domain Inhibition in a Bacterial Response Regulator. Cell Chem Biol, 23, 2016
6QRJ	Crystal structure of ShkA full-length in complex with AMPPNP 分子名称: Hybrid kinase, MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER 著者 Dubey, B.N, Schirmer, T. 登録日 2019-02-19 公開日 2020-01-08 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.65 Å) 主引用文献 Hybrid histidine kinase activation by cyclic di-GMP-mediated domain liberation. Proc.Natl.Acad.Sci.USA, 117, 2020
6QRL	Crystal structure of ShkA _Rec1 in complex with c-di-GMP 分子名称: 9,9'-[(2R,3R,3aS,5S,7aR,9R,10R,10aS,12S,14aR)-3,5,10,12-tetrahydroxy-5,12-dioxidooctahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8]tetraoxadiphosphacyclododecine-2,9-diyl]bis(2-amino-1,9-dihydro-6H-purin-6-one), Hybrid kinase, SULFATE ION 著者 Dubey, B.N, Schirmer, T. 登録日 2019-02-19 公開日 2020-01-08 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.84 Å) 主引用文献 Hybrid histidine kinase activation by cyclic di-GMP-mediated domain liberation. Proc.Natl.Acad.Sci.USA, 117, 2020
6J93	Crystal structure of Peptidyl-tRNA hydrolase from Acinetobacter baumannii at 0.95 A resolution 分子名称: 1,2-ETHANEDIOL, Peptidyl-tRNA hydrolase 著者 Viswanathan, V, Sharma, P, Singh, P.K, Iqbal, N, Sharma, S, Singh, T.P. 登録日 2019-01-21 公開日 2019-02-06 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (0.95 Å) 主引用文献 Crystal structure of Peptidyl-tRNA hydrolase form apo at 0.95 A resolution. To Be Published
2LP0	The solution structure of homeodomain-protein complex 分子名称: Geminin, Homeobox protein Hox-C9 著者 Liu, C, Zhou, B, Xu, Z, Zhu, G. 登録日 2012-01-29 公開日 2012-06-06 最終更新日 2024-05-15 実験手法 SOLUTION NMR 主引用文献 Structural basis for homeodomain recognition by the cell-cycle regulator Geminin Proc.Natl.Acad.Sci.USA, 2012
6JKX	Crystal structure of peptidyl-tRNA hydrolase with multiple sodium and chloride ions at 1.08 A resolution. 分子名称: CHLORIDE ION, METHANOL, Peptidyl-tRNA hydrolase, ... 著者 Viswanathan, V, Sharma, P, Bhushan, A, Sharma, S, Singh, T.P. 登録日 2019-03-03 公開日 2019-03-13 最終更新日 2023-11-22 実験手法 X-RAY DIFFRACTION (1.08 Å) 主引用文献 Crystal structure of peptidyl-tRNA hydrolase with multiple sodium and chloride ions at 1.08 A resolution. To Be Published

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