PDB: 11035 件ウェブページステータス検索Chemie searchBIRD

---

3AXM	Structure of rice Rubisco in complex with 6PG 分子名称: 6-PHOSPHOGLUCONIC ACID, MAGNESIUM ION, Ribulose bisphosphate carboxylase large chain, ... 著者 Matsumura, H, Mizohata, E, Ishida, H, Kogami, A, Ueno, T, Makino, A, Inoue, T, Yokota, A, Mae, T, Kai, Y. 登録日 2011-04-11 公開日 2012-04-11 最終更新日 2013-06-05 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Crystal structure of rice Rubisco and implications for activation induced by positive effectors NADPH and 6-phosphogluconate J.Mol.Biol., 422, 2012
2Y6J	X-2 engineered mutated CBM4-2 Carbohydrate Binding Module from a Thermostable Rhodothermus marinus Xylanase 分子名称: CALCIUM ION, XYLANASE 著者 von Schantz, L, Hakansson, M, Logan, D.T, Walse, B, Osterlin, J, Nordberg-Karlsson, E, Ohlin, M. 登録日 2011-01-24 公開日 2012-03-07 最終更新日 2023-12-20 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structural basis for carbohydrate-binding specificity--a comparative assessment of two engineered carbohydrate-binding modules. Glycobiology, 22, 2012
3RKZ	Discovery of a stable macrocyclic o-aminobenzamide Hsp90 inhibitor capable of significantly decreasing tumor volume in a mouse xenograft model. 分子名称: (5R,6S)-3-(L-alanyl)-5,6,15,15,18-pentamethyl-17-oxo-2,3,4,5,6,7,14,15,16,17-decahydro-1H-12,8-(metheno)[1,5,9]triazacyclotetradecino[1,2-a]indole-9-carboxamide, Heat shock protein HSP 90-alpha 著者 Zapf, C.W, Bloom, J.D, Li, Z, Dushin, R.G, Nittoli, T, Otteng, M, Nikitenko, A, Golas, J.M, Liu, H, Lucas, J, Boschelli, F, Vogan, E, Olland, A, Johnson, M, Levin, J.I. 登録日 2011-04-18 公開日 2011-07-13 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (1.5693 Å) 主引用文献 Discovery of a stable macrocyclic o-aminobenzamide Hsp90 inhibitor which significantly decreases tumor volume in a mouse xenograft model. Bioorg.Med.Chem.Lett., 21, 2011
2Y6H	X-2 L110F CBM4-2 Carbohydrate Binding Module from a Thermostable Rhodothermus marinus Xylanase 分子名称: CALCIUM ION, XYLANASE 著者 von Schantz, L, Hakansson, M, Logan, D.T, Walse, B, Osterlin, J, Nordberg-Karlsson, E, Ohlin, M. 登録日 2011-01-21 公開日 2012-03-07 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (1.08 Å) 主引用文献 Structural basis for carbohydrate-binding specificity--a comparative assessment of two engineered carbohydrate-binding modules. Glycobiology, 22, 2012
2Z1I	Crystal structure of E.coli RNase HI surface charged mutant(Q4R/T40E/Q72H/Q76K/Q80E/T92K/Q105K/Q113R/Q115K) 分子名称: Ribonuclease HI 著者 You, D.J, Fukuchi, S, Nishikawa, K, Koga, Y, Takano, K, Kanaya, S. 登録日 2007-05-08 公開日 2007-11-13 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Protein Thermostabilization Requires a Fine-tuned Placement of Surface-charged Residues J.Biochem.(Tokyo), 142, 2007
2Z57	Crystal structure of G56E-propeptide:S324A-subtilisin complex 分子名称: CALCIUM ION, Tk-subtilisin, ZINC ION 著者 Pulido, M.A, Tanaka, S, Sringiew, C, You, D.J, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. 登録日 2007-06-29 公開日 2008-01-01 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Requirement of left-handed glycine residue for high stability of the Tk-subtilisin propeptide as revealed by mutational and crystallographic analyses J.Mol.Biol., 374, 2007
2Z6P	Crystal Structure of the Ufc1, Ufm1 conjugating enzyme 1 分子名称: Ufm1-conjugating enzyme 1 著者 Mizushima , T, Tatsumi, K, Ozaki, Y, Kawakami, T, Suzuki, A, Ogasahara, K, Komatsu, M, Kominami, E, Tanaka, K, Yamane, T. 登録日 2007-08-06 公開日 2007-09-25 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Crystal structure of Ufc1, the Ufm1-conjugating enzyme Biochem.Biophys.Res.Commun., 362, 2007
2ZP0	Human factor viia-tissue factor complexed with benzylsulfonamide-D-ile-gln-P-aminobenzamidine 分子名称: (2S)-N-[(4-carbamimidoylphenyl)methyl]-2-[[(2R,3R)-3-methyl-2-(phenylmethylsulfonylamino)pentanoyl]amino]pentanediamide, CALCIUM ION, Factor VII heavy chain, ... 著者 Kadono, S, Sakamoto, A, Kikuchi, Y, Oh-eda, M, Yabuta, N, Koga, T, Hattori, K, Shiraishi, T, Haramura, M, Kodama, H. 登録日 2008-06-20 公開日 2008-07-15 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Peptide Mimetic Factor VIIa Inhibitor: Importance of Hydrophilic Pocket in S2 Site to Improve Selectivity aganist Thrombin LETT.DRUG DES.DISCOVERY, 2, 2005
3B2K	Iodide derivative of human LFABP 分子名称: Fatty acid-binding protein, liver, IODIDE ION, ... 著者 Sharma, A, Yogavel, M, Sharma, A. 登録日 2011-08-03 公開日 2012-06-20 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.73 Å) 主引用文献 Utility of anion and cation combinations for phasing of protein structures. J.Struct.Funct.Genom., 13, 2012
3B2H	Iodide derivative of human LFABP at high resolution 分子名称: Fatty acid-binding protein, liver, IODIDE ION, ... 著者 Sharma, A, Yogavel, M, Sharma, A. 登録日 2011-08-03 公開日 2012-06-20 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Utility of anion and cation combinations for phasing of protein structures. J.Struct.Funct.Genom., 13, 2012
3PMO	The structure of LpxD from Pseudomonas aeruginosa at 1.3 A resolution 分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 著者 Badger, J, Chie-Leon, B, Logan, C, Sridhar, V, Sankaran, B, Zwart, P.H, Nienaber, V. 登録日 2010-11-17 公開日 2011-07-27 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 The structure of LpxD from Pseudomonas aeruginosa at 1.3 A resolution. Acta Crystallogr.,Sect.F, 67, 2011
3ATH	Crystal structure of Pyrococcus horikoshii kynurenine aminotransferase in complex with four AKGs as substrates and allosteric effectors 分子名称: 2-OXOGLUTARIC ACID, PYRIDOXAL-5'-PHOSPHATE, Putative uncharacterized protein PH0207 著者 Okada, K, Angkawidjaja, C, Koga, Y, Takano, K, Kanaya, S. 登録日 2011-01-05 公開日 2012-01-18 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.69 Å) 主引用文献 Characterization of kynurenine aminotransferase from hyperthermophilic archaeon: enzymatic activity for conversion to kynurenic acid is allosterically regulated by alpha-ketoglutaric acid cooperatively with kynurenine To be Published
3AXK	Structure of rice Rubisco in complex with NADP(H) 分子名称: GLYCEROL, MAGNESIUM ION, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ... 著者 Matsumura, H, Mizohata, E, Ishida, H, Kogami, A, Ueno, T, Makino, A, Inoue, T, Yokota, A, Mae, T, Kai, Y. 登録日 2011-04-11 公開日 2012-04-11 最終更新日 2013-06-05 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal structure of rice Rubisco and implications for activation induced by positive effectors NADPH and 6-phosphogluconate J.Mol.Biol., 422, 2012
3B09	Crystal structure of the N-domain of FKBP22 from Shewanella sp. SIB1 分子名称: Peptidyl-prolyl cis-trans isomerase 著者 Budiman, C, Angkawidjaja, C, Motoike, H, Koga, Y, Takano, K, Kanaya, S. 登録日 2011-06-07 公開日 2012-04-18 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal structure of N-domain of FKBP22 from Shewanella sp. SIB1: dimer dissociation by disruption of Val-Leu knot Protein Sci., 20, 2011
3RY5	Three-dimensional structure of glycosylated fcgammariia (high-responder polymorphism) 分子名称: LOW AFFINITY IMMUNOGLOBULIN GAMMA FC REGION RECEPTOR II-A 著者 Ramsland, P.A, Farrugia, W, Hogarth, P.M. 登録日 2011-05-11 公開日 2011-08-31 最終更新日 2011-09-21 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural Basis for Fc{gamma}RIIa Recognition of Human IgG and Formation of Inflammatory Signaling Complexes. J.Immunol., 187, 2011
3TFL	LytR-Cps2a-Psr family protein with bound octaprenyl pyrophosphate lipid 分子名称: (2Z,6Z,10Z,14Z,18Z,22Z,26Z)-3,7,11,15,19,23,27,31-octamethyldotriaconta-2,6,10,14,18,22,26,30-octaen-1-yl trihydrogen diphosphate, 1,2-ETHANEDIOL, CPS2A, ... 著者 Kawai, Y, Marles-Wright, J, Cleverley, R.M, Emmins, R, Ishikawa, S, Kuwano, M, Heinz, N, Khai Bui, N, Hoyland, C.N, Ogasawara, N, Lewis, R.J, Vollmer, W, Daniel, R.A, Errington, J. 登録日 2011-08-16 公開日 2011-10-12 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 A widespread family of bacterial cell wall assembly proteins. Embo J., 30, 2011
2Z8X	Crystal structure of extracellular lipase from Pseudomonas sp. MIS38 分子名称: CALCIUM ION, Lipase, ZINC ION 著者 Angkawidjaja, C, You, D.J, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. 登録日 2007-09-11 公開日 2007-10-30 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.48 Å) 主引用文献 Crystal structure of a family I.3 lipase from Pseudomonas sp. MIS38 in a closed conformation FEBS Lett., 581, 2007
2Z2Y	Crystal structure of autoprocessed form of Tk-subtilisin 分子名称: CALCIUM ION, Tk-subtilisin, ZINC ION 著者 Tanaka, S, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. 登録日 2007-05-29 公開日 2007-12-04 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.89 Å) 主引用文献 Four new crystal structures of Tk-subtilisin in unautoprocessed, autoprocessed and mature forms: insight into structural changes during maturation J.Mol.Biol., 372, 2007
3RCD	HER2 Kinase Domain Complexed with TAK-285 分子名称: N-{2-[4-({3-chloro-4-[3-(trifluoromethyl)phenoxy]phenyl}amino)-5H-pyrrolo[3,2-d]pyrimidin-5-yl]ethyl}-3-hydroxy-3-methylbutanamide, Receptor tyrosine-protein kinase erbB-2 著者 Aertgeerts, K, Skene, R, Sogabe, S. 登録日 2011-03-30 公開日 2011-11-23 最終更新日 2023-09-13 実験手法 X-RAY DIFFRACTION (3.21 Å) 主引用文献 Design and Synthesis of Novel Human Epidermal Growth Factor Receptor 2 (HER2)/Epidermal Growth Factor Receptor (EGFR) Dual Inhibitors Bearing a Pyrrolo[3,2-d]pyrimidine Scaffold. J.Med.Chem., 54, 2011
3B2I	Iodide derivative of human LFABP 分子名称: Fatty acid-binding protein, liver, IODIDE ION, ... 著者 Sharma, A, Yogavel, M, Sharma, A. 登録日 2011-08-03 公開日 2012-07-11 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.86 Å) 主引用文献 Utility of anion and cation combinations for phasing of protein structures. J.Struct.Funct.Genom., 13, 2012
3B2J	Iodide derivative of human LFABP 分子名称: Fatty acid-binding protein, liver, IODIDE ION, ... 著者 Sharma, A, Yogavel, M, Sharma, A. 登録日 2011-08-03 公開日 2012-06-20 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Utility of anion and cation combinations for phasing of protein structures. J.Struct.Funct.Genom., 13, 2012
3U3G	Structure of LC11-RNase H1 Isolated from Compost by Metagenomic Approach: Insight into the Structural Bases for Unusual Enzymatic Properties of Sto-RNase H1 分子名称: CHLORIDE ION, Ribonuclease H, UNKNOWN LIGAND 著者 Nguyen, T.N, Angkawidjaja, C, Kanaya, E, Koga, Y, Takano, K, Kanaya, S. 登録日 2011-10-05 公開日 2012-03-07 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Activity, stability, and structure of metagenome-derived LC11-RNase H1, a homolog of Sulfolobus tokodaii RNase H1 Protein Sci., 21, 2012
2ZVD	Crystal structure of Pseudomonas sp. MIS38 lipase in an open conformation 分子名称: CALCIUM ION, Lipase 著者 Angkawidjaja, C, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. 登録日 2008-11-05 公開日 2009-11-10 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 X-ray Crystallographic and MD Simulation Studies on the Mechanism of Interfacial Activation of a Family I.3 Lipase with Two Lids J.Mol.Biol., 2010
2ZWL	Human factor viia-tissue factor complexed with highly selective peptide inhibitor 分子名称: 2-[[(2R)-1-[[(2S)-5-amino-1-[(4-carbamimidoylphenyl)methylamino]-1,5-dioxo-pentan-2-yl]amino]-3-(1H-indol-3-yl)-1-oxo-propan-2-yl]sulfamoyl]ethanoic acid, CALCIUM ION, Factor VII heavy chain, ... 著者 Kadono, S, Sakamoto, A, Kikuchi, Y, Oh-Eda, M, Yabuta, N, Koga, T, Hattori, K, Shiraishi, T, Haramura, M, Sato, H, Ohta, M, Kozono, T. 登録日 2008-12-16 公開日 2009-01-20 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Human factor viia-tissue factor complexed with highly selective peptide inhibitor To be Published
2ZX0	Rhamnose-binding lectin CSL3 分子名称: CSL3, GLYCEROL, PHOSPHATE ION 著者 Shirai, T, Watababe, Y, Lee, M, Ogawa, T, Muramoto, K. 登録日 2008-12-19 公開日 2009-06-30 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Structure of rhamnose-binding lectin CSL3: unique pseudo-tetrameric architecture of a pattern recognition protein J.Mol.Biol., 391, 2009

<112113114115116117118119120121122123124125126127>