2Z8Z
 
 | | Crystal structure of a platinum-bound S445C mutant of Pseudomonas sp. MIS38 lipase | | 分子名称: | CALCIUM ION, Lipase, PLATINUM (II) ION, ... | | 著者 | Angkawidjaja, C, You, D.J, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | | 登録日 | 2007-09-13 | | 公開日 | 2007-10-30 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | | 主引用文献 | Crystal structure of a family I.3 lipase from Pseudomonas sp. MIS38 in a closed conformation
FEBS Lett., 581, 2007
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2Z1G
 | | Crystal structure of E.coli RNase HI surface charged mutant(Q4R/T40E/Q72H/Q76K/Q80E/T92K/Q105K) | | 分子名称: | Ribonuclease HI | | 著者 | You, D.J, Fukuchi, S, Nishikawa, K, Koga, Y, Takano, K, Kanaya, S. | | 登録日 | 2007-05-08 | | 公開日 | 2007-11-13 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | | 主引用文献 | Protein Thermostabilization Requires a Fine-tuned Placement of Surface-charged Residues
J.Biochem.(Tokyo), 142, 2007
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2Z58
 | | Crystal structure of G56W-propeptide:S324A-subtilisin complex | | 分子名称: | CALCIUM ION, Tk-subtilisin, ZINC ION | | 著者 | Pulido, M.A, Tanaka, S, Sringiew, C, You, D.J, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | | 登録日 | 2007-06-29 | | 公開日 | 2008-01-01 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (1.88 Å) | | 主引用文献 | Requirement of left-handed glycine residue for high stability of the Tk-subtilisin propeptide as revealed by mutational and crystallographic analyses
J.Mol.Biol., 374, 2007
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2Z6O
 | | Crystal Structure of the Ufc1, Ufm1 conjugating enzyme 1 | | 分子名称: | MAGNESIUM ION, Ufm1-conjugating enzyme 1 | | 著者 | Mizushima , T, Tatsumi, K, Ozaki, Y, Kawakami, T, Suzuki, A, Ogasahara, K, Komatsu, M, Kominami, E, Tanaka, K, Yamane, T. | | 登録日 | 2007-08-06 | | 公開日 | 2007-09-25 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (1.6 Å) | | 主引用文献 | Crystal structure of Ufc1, the Ufm1-conjugating enzyme
Biochem.Biophys.Res.Commun., 362, 2007
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2Z2X
 | | Crystal structure of mature form of Tk-subtilisin | | 分子名称: | CALCIUM ION, Tk-subtilisin | | 著者 | Tanaka, S, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | | 登録日 | 2007-05-29 | | 公開日 | 2007-12-04 | | 最終更新日 | 2023-11-15 | | 実験手法 | X-RAY DIFFRACTION (1.7 Å) | | 主引用文献 | Four new crystal structures of Tk-subtilisin in unautoprocessed, autoprocessed and mature forms: insight into structural changes during maturation
J.Mol.Biol., 372, 2007
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2ZRQ
 | | Crystal structure of S324A-subtilisin | | 分子名称: | CALCIUM ION, Tk-subtilisin | | 著者 | Tanaka, S, Takeuchi, Y, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | | 登録日 | 2008-08-28 | | 公開日 | 2009-03-03 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (2.16 Å) | | 主引用文献 | Crystal structure of Tk-subtilisin folded without propeptide: requirement of propeptide for acceleration of folding
Febs Lett., 582, 2008
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3R91
 | | Macrocyclic lactams as potent Hsp90 inhibitors with excellent tumor exposure and extended biomarker activity. | | 分子名称: | (6S)-4,6,15,15,18-pentamethyl-5,17-dioxo-2,3,4,5,6,7,14,15,16,17-decahydro-1H-12,8-(metheno)[1,4,9]triazacyclotetradecino[9,8-a]indole-9-carboxamide, Heat shock protein HSP 90-alpha | | 著者 | Zapf, C.W, Bloom, J.D, McBean, J.L, Dushin, R.G, Nittoli, T, Otteng, M, Ingalls, C, Golas, J.M, Liu, H, Lucas, J, Boschelli, F, Vogan, E, Hu, Y, Levin, J.I. | | 登録日 | 2011-03-24 | | 公開日 | 2011-05-11 | | 最終更新日 | 2023-09-13 | | 実験手法 | X-RAY DIFFRACTION (1.579 Å) | | 主引用文献 | Macrocyclic lactams as potent Hsp90 inhibitors with excellent tumor exposure and extended biomarker activity.
Bioorg.Med.Chem.Lett., 21, 2011
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2ZX2
 | | Rhamnose-binding lectin CSL3 | | 分子名称: | CSL3, PHOSPHATE ION, alpha-L-rhamnopyranose | | 著者 | Shirai, T, Watababe, Y, Lee, M, Ogawa, T, Muramoto, K. | | 登録日 | 2008-12-19 | | 公開日 | 2009-06-30 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | | 主引用文献 | Structure of rhamnose-binding lectin CSL3: unique pseudo-tetrameric architecture of a pattern recognition protein
J.Mol.Biol., 391, 2009
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3A3O
 | | Crystal structure of complex between SA-subtilisin and Tk-propeptide with deletion of the five C-terminal residues | | 分子名称: | CALCIUM ION, Tk-subtilisin, ZINC ION | | 著者 | Tanaka, S, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | | 登録日 | 2009-06-15 | | 公開日 | 2009-08-18 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | | 主引用文献 | Identification of the interactions critical for propeptide-catalyzed folding of Tk-subtilisin
J.Mol.Biol., 394, 2009
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3A70
 | | Crystal structure of Pseudomonas sp. MIS38 lipase in complex with diethyl phosphate | | 分子名称: | ACETATE ION, CALCIUM ION, DIETHYL PHOSPHONATE, ... | | 著者 | Angkawidjaja, C, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | | 登録日 | 2009-09-10 | | 公開日 | 2010-05-26 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (2.15 Å) | | 主引用文献 | X-ray Crystallographic and MD Simulation Studies on the Mechanism of Interfacial Activation of a Family I.3 Lipase with Two Lids
J.Mol.Biol., 2010
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2ZX1
 | | Rhamnose-binding lectin CSL3 | | 分子名称: | CSL3, PHOSPHATE ION | | 著者 | Shirai, T, Watababe, Y, Lee, M, Ogawa, T, Muramoto, K. | | 登録日 | 2008-12-19 | | 公開日 | 2009-06-30 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | | 主引用文献 | Structure of rhamnose-binding lectin CSL3: unique pseudo-tetrameric architecture of a pattern recognition protein
J.Mol.Biol., 391, 2009
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2ZXE
 | | Crystal structure of the sodium - potassium pump in the E2.2K+.Pi state | | 分子名称: | 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose, CHOLESTEROL, ... | | 著者 | Shinoda, T, Ogawa, H, Cornelius, F, Toyoshima, C. | | 登録日 | 2008-12-22 | | 公開日 | 2009-05-19 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (2.4 Å) | | 主引用文献 | Crystal structure of the sodium - potassium pump at 2.4 A resolution
Nature, 459, 2009
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2ZZU
 | | Human Factor VIIA-Tissue Factor Complexed with ethylsulfonamide-D-5-(3-carboxybenzyloxy)-Trp-Gln-p-aminobenzamidine | | 分子名称: | 3-[[3-[(2R)-3-[[(2S)-5-amino-1-[(4-carbamimidoylphenyl)methylamino]-1,5-dioxo-pentan-2-yl]amino]-2-(ethylsulfonylamino)-3-oxo-propyl]-1H-indol-5-yl]oxymethyl]benzoic acid, CALCIUM ION, Factor VII heavy chain, ... | | 著者 | Kadono, S, Sakamoto, A, Kikuchi, Y, Oh-Eda, M, Yabuta, N, Koga, T, Hattori, K, Shiraishi, T, Haramura, M, Sato, H, Ohta, M, Kozono, T. | | 登録日 | 2009-02-25 | | 公開日 | 2009-03-24 | | 最終更新日 | 2023-11-15 | | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | | 主引用文献 | Design and synthesis of peptidomimetic factor VIIa inhibitors
Chem.Pharm.Bull., 58, 2010
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3A3N
 | | Crystal structure of complex between SA-subtilisin and Tk-propeptide with deletion of the two C-terminal residues | | 分子名称: | CALCIUM ION, Tk-subtilisin, ZINC ION | | 著者 | Tanaka, S, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | | 登録日 | 2009-06-15 | | 公開日 | 2009-08-18 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | | 主引用文献 | Identification of the interactions critical for propeptide-catalyzed folding of Tk-subtilisin
J.Mol.Biol., 394, 2009
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2ZX4
 | | Rhamnose-binding lectin CSL3 | | 分子名称: | CSL3, PHOSPHATE ION, alpha-D-galactopyranose-(1-4)-beta-D-galactopyranose, ... | | 著者 | Shirai, T, Watababe, Y, Lee, M, Ogawa, T, Muramoto, K. | | 登録日 | 2008-12-19 | | 公開日 | 2009-06-30 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (2.7 Å) | | 主引用文献 | Structure of rhamnose-binding lectin CSL3: unique pseudo-tetrameric architecture of a pattern recognition protein
J.Mol.Biol., 391, 2009
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2ZYK
 | | Crystal structure of cyclo/maltodextrin-binding protein complexed with gamma-cyclodextrin | | 分子名称: | Cyclooctakis-(1-4)-(alpha-D-glucopyranose), Solute-binding protein | | 著者 | Tonozuka, T, Sogawa, A, Yamada, M, Matsumoto, N, Yoshida, H, Kamitori, S, Ichikawa, K, Mizuno, M, Nishikawa, A, Sakano, Y. | | 登録日 | 2009-01-26 | | 公開日 | 2009-02-10 | | 最終更新日 | 2024-04-03 | | 実験手法 | X-RAY DIFFRACTION (2.5 Å) | | 主引用文献 | Structural basis for cyclodextrin recognition by Thermoactinomyces vulgaris cyclo/maltodextrin-binding protein
Febs J., 274, 2007
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3ABD
 | | Structure of human REV7 in complex with a human REV3 fragment in a monoclinic crystal | | 分子名称: | DNA polymerase zeta catalytic subunit, Mitotic spindle assembly checkpoint protein MAD2B | | 著者 | Hara, K, Hashimoto, H, Murakumo, Y, Kobayashi, S, Kogame, T, Unzai, S, Akashi, S, Takeda, S, Shimizu, T, Sato, M. | | 登録日 | 2009-12-07 | | 公開日 | 2010-02-16 | | 最終更新日 | 2024-05-29 | | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | | 主引用文献 | Crystal structure of human REV7 in complex with a human REV3 fragment and structural implication of the interaction between DNA polymerase {zeta} and REV1
J.Biol.Chem., 285, 2010
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2ZX3
 | | Rhamnose-binding lectin CSL3 | | 分子名称: | CSL3, PHOSPHATE ION, alpha-D-galactopyranose-(1-6)-beta-D-glucopyranose | | 著者 | Shirai, T, Watababe, Y, Lee, M, Ogawa, T, Muramoto, K. | | 登録日 | 2008-12-19 | | 公開日 | 2009-06-30 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | | 主引用文献 | Structure of rhamnose-binding lectin CSL3: unique pseudo-tetrameric architecture of a pattern recognition protein
J.Mol.Biol., 391, 2009
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3A6Z
 | | Crystal structure of Pseudomonas sp. MIS38 lipase (PML) in the open conformation following dialysis against Ca-free buffer | | 分子名称: | CALCIUM ION, Lipase | | 著者 | Angkawidjaja, C, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | | 登録日 | 2009-09-10 | | 公開日 | 2010-05-26 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (2.15 Å) | | 主引用文献 | X-ray Crystallographic and MD Simulation Studies on the Mechanism of Interfacial Activation of a Family I.3 Lipase with Two Lids
J.Mol.Biol., 2010
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3RY6
 | | Complex of fcgammariia (CD32) and the FC of human IGG1 | | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCEROL, Ig gamma-1 chain C region, ... | | 著者 | Ramsland, P.A, Farrugia, W, Scott, A.M, Hogarth, P.M. | | 登録日 | 2011-05-11 | | 公開日 | 2011-08-31 | | 最終更新日 | 2023-09-13 | | 実験手法 | X-RAY DIFFRACTION (3.8 Å) | | 主引用文献 | Structural Basis for Fc{gamma}RIIa Recognition of Human IgG and Formation of Inflammatory Signaling Complexes.
J.Immunol., 187, 2011
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3RY4
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3A3P
 | | Crystal structure of complex between E201A/SA-subtilisin and Tk-propeptide | | 分子名称: | CALCIUM ION, Tk-subtilisin, ZINC ION | | 著者 | Tanaka, S, Matsumura, H, Koga, Y, Takano, K, Kanaya, S. | | 登録日 | 2009-06-15 | | 公開日 | 2009-08-18 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (1.9 Å) | | 主引用文献 | Identification of the interactions critical for propeptide-catalyzed folding of Tk-subtilisin
J.Mol.Biol., 394, 2009
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3AJY
 | | Crystal Structure of Ancestral Congerin Con-anc | | 分子名称: | Ancestral congerin Con-anc, beta-D-galactopyranose-(1-4)-beta-D-glucopyranose | | 著者 | Konno, A, Kitagawa, A, Watanabe, M, Ogawa, T, Shirai, T. | | 登録日 | 2010-06-29 | | 公開日 | 2011-05-18 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (2.01 Å) | | 主引用文献 | Tracing protein evolution through ancestral structures of fish galectin
Structure, 19, 2011
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3AV7
 | | Crystal structure of Pyrococcus horikoshii kynurenine aminotransferase in complex with PMP, KYN as substrates and KYA as products | | 分子名称: | (2S)-2-amino-4-(2-aminophenyl)-4-oxobutanoic acid, 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, 4-hydroxyquinoline-2-carboxylic acid, ... | | 著者 | Okada, K, Angkawidjaja, C, Koga, Y, Takano, K, Kanaya, S. | | 登録日 | 2011-02-23 | | 公開日 | 2012-03-07 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (1.84 Å) | | 主引用文献 | Structural insight into kynurenic acid excretion mechanisms of kynurenine aminotransferase in the hyperthermophilic archaeon Pyrococcus horikoshii
To be Published
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3AYQ
 | | Crystal structure of inhibitor bound lysozyme from Meretrix lusoria | | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-N-[(5S,6R)-5-hydroxy-6-(hydroxymethyl)-2-oxo-5,6-dihydro-2H-pyran-3-yl]acetamide, Lysozyme | | 著者 | Yoneda, K, Kuwano, Y, Usui, T, Ogata, M, Suzuki, A, Araki, T. | | 登録日 | 2011-05-13 | | 公開日 | 2012-05-23 | | 最終更新日 | 2023-11-01 | | 実験手法 | X-RAY DIFFRACTION (1.77 Å) | | 主引用文献 | Crystal structure of inhibitor bound lysozyme from Meretrix lusoria
To be Published
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