Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

4DPQ
DownloadVisualize
BU of 4dpq by Molmil
The structure of dihydrodipicolinate synthase 2 from Arabidopsis thaliana in complex with (S)-lysine
分子名称: Dihydrodipicolinate synthase 2, chloroplastic, LYSINE, ...
著者Griffin, M.D.W, Billakanti, J.M, Gerrard, J.A, Dobson, R.C.J, Pearce, F.G.
登録日2012-02-14
公開日2012-07-18
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.202 Å)
主引用文献Characterisation of the first enzymes committed to lysine biosynthesis in Arabidopsis thaliana
Plos One, 7, 2012
7ZMY
DownloadVisualize
BU of 7zmy by Molmil
Crystal structure of the light-driven inward proton pump xenorhodopsin BcXeR in the ground state at pH 8.2 in the presence of sodium at 100K
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, EICOSANE, OLEIC ACID, ...
著者Kovalev, K, Tsybrov, F, Alekseev, A, Bourenkov, G, Gordeliy, V.
登録日2022-04-20
公開日2023-05-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Mechanisms of inward transmembrane proton translocation.
Nat.Struct.Mol.Biol., 30, 2023
7ZN0
DownloadVisualize
BU of 7zn0 by Molmil
Crystal structure of the light-driven inward proton pump xenorhodopsin BcXeR in the M state at pH 8.2 in the presence of sodium at 100K
分子名称: EICOSANE, OLEIC ACID, PHOSPHATE ION, ...
著者Kovalev, K, Tsybrov, F, Alekseev, A, Bourenkov, G, Gordeliy, V.
登録日2022-04-20
公開日2023-05-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Mechanisms of inward transmembrane proton translocation.
Nat.Struct.Mol.Biol., 30, 2023
7ZN3
DownloadVisualize
BU of 7zn3 by Molmil
Crystal structure of the light-driven inward proton pump xenorhodopsin BcXeR in the L state at pH 8.2 in the presence of sodium at 100K
分子名称: EICOSANE, OLEIC ACID, PHOSPHATE ION, ...
著者Kovalev, K, Tsybrov, F, Alekseev, A, Bourenkov, G, Gordeliy, V.
登録日2022-04-20
公開日2023-05-10
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Mechanisms of inward transmembrane proton translocation.
Nat.Struct.Mol.Biol., 30, 2023
5G4J
DownloadVisualize
BU of 5g4j by Molmil
Phospholyase A1RDF1 from Arthrobacter in complex with phosphoethanolamine
分子名称: PUTATIVE AMINOTRANSFERASE CLASS III PROTEIN, SODIUM ION, {5-hydroxy-6-methyl-4-[(E)-{[2-(phosphonooxy)ethyl]imino}methyl]pyridin-3-yl}methyl dihydrogen phosphate
著者Cuetos, A, Tuan, A.N, Mangas Sanchez, J, Grogan, G.
登録日2016-05-13
公開日2016-10-19
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.87 Å)
主引用文献Structural Basis for Phospholyase Activity of a Class III Transaminase Homologue.
Chembiochem, 17, 2016
6BEL
DownloadVisualize
BU of 6bel by Molmil
Ternary complex crystal structure of DNA polymerase Beta with R-isomer of beta-gamma-CHF-dCTP
分子名称: 2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE, 2'-deoxy-5'-O-[(R)-{[(R)-[(R)-fluoro(phosphono)methyl](hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]cytidine, CHLORIDE ION, ...
著者Batra, V.K, Wilson, S.H.
登録日2017-10-25
公開日2018-10-31
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.898 Å)
主引用文献Mapping Functional Substrate-Enzyme Interactions in the pol beta Active Site through Chemical Biology: Structural Responses to Acidity Modification of Incoming dNTPs.
Biochemistry, 57, 2018
5GTK
DownloadVisualize
BU of 5gtk by Molmil
NAD+ complex structure of aldehyde dehydrogenase from bacillus cereus
分子名称: Betaine-aldehyde dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SODIUM ION
著者Ngo, H.P.T, Hong, S.H, Ho, T.H, Oh, D.K, Kang, L.W.
登録日2016-08-21
公開日2017-09-06
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Crystal structures of aldehyde dehydrogenase from Bacillus cereus having atypical bidirectional oxidizing and reducing activities for all-trans-retinal
To Be Published
6SXG
DownloadVisualize
BU of 6sxg by Molmil
Crystal Structure of the Voltage-Gated Sodium Channel NavMs in complex with 4-hydroxytamoxifen (2.4 Angstrom resolution)
分子名称: 4-HYDROXYTAMOXIFEN, DODECAETHYLENE GLYCOL, HEGA-10, ...
著者Sula, A, Hollingworth, D, Wallace, B.A.
登録日2019-09-25
公開日2021-02-03
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献A tamoxifen receptor within a voltage-gated sodium channel.
Mol.Cell, 81, 2021
6R8T
DownloadVisualize
BU of 6r8t by Molmil
Crystal structure of aIF2gamma subunit I181T from archaeon Sulfolobus solfataricus complexed with GDPCP
分子名称: FORMIC ACID, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, ...
著者Kravchenko, O, Arkhipova, V, Gabdulkhakov, A, Stolboushkina, E, Nikonov, O, Garber, M, Nikonov, S.
登録日2019-04-02
公開日2020-05-06
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of aIF2gamma subunit I181T from archaeon Sulfolobus solfataricus complexed with GDPCP
To Be Published
5GHI
DownloadVisualize
BU of 5ghi by Molmil
Crystal structure of human MTH1(G2K mutant) in complex with 8-oxo-dGTP
分子名称: 7,8-dihydro-8-oxoguanine triphosphatase, 8-OXO-2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, SODIUM ION
著者Nakamura, T, Waz, S, Hirata, K, Nakabeppu, Y, Yamagata, Y.
登録日2016-06-20
公開日2017-01-04
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.211 Å)
主引用文献Structural and Kinetic Studies of the Human Nudix Hydrolase MTH1 Reveal the Mechanism for Its Broad Substrate Specificity
J. Biol. Chem., 292, 2017
5FV6
DownloadVisualize
BU of 5fv6 by Molmil
KpFlo11 presents a novel member of the Flo11 family with a unique recognition pattern for homophilic interactions
分子名称: ACETATE ION, Flocculation protein FLO11, GLYCEROL, ...
著者Kraushaar, T, Brueckner, S, Mikolaiski, M, Schreiner, F, Veelders, M, Moesch, H.U, Essen, L.O.
登録日2016-02-03
公開日2017-02-22
最終更新日2021-06-30
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Kin discrimination in social yeast is mediated by cell surface receptors of the Flo11 adhesin family.
Elife, 9, 2020
6BTF
DownloadVisualize
BU of 6btf by Molmil
DNA Polymerase Beta I260Q Ternary Complex
分子名称: 2'-DEOXYURIDINE 5'-ALPHA,BETA-IMIDO-TRIPHOSPHATE, DNA Downstream Strand, DNA Primer Strand, ...
著者Eckenroth, B.E, Doublie, S.
登録日2017-12-06
公開日2018-09-26
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献I260Q DNA polymerase beta highlights precatalytic conformational rearrangements critical for fidelity.
Nucleic Acids Res., 46, 2018
5FAV
DownloadVisualize
BU of 5fav by Molmil
E491Q mutant of choline TMA-lyase
分子名称: Choline trimethylamine-lyase, MALONATE ION, SODIUM ION
著者Funk, M.A, Drennan, C.L.
登録日2015-12-12
公開日2016-09-28
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Molecular Basis of C-N Bond Cleavage by the Glycyl Radical Enzyme Choline Trimethylamine-Lyase.
Cell Chem Biol, 23, 2016
6AWS
DownloadVisualize
BU of 6aws by Molmil
Structure of PR 10 Allergen Ara h 8.01 in complex with quercetin
分子名称: 3,5,7,3',4'-PENTAHYDROXYFLAVONE, Ara h 8 allergen, CHLORIDE ION, ...
著者Offermann, L.R, McBride, J, Hurlburt, B.K, Maleki, S.J, Pote, S.S, Perdue, M, Chruszcz, M.
登録日2017-09-06
公開日2018-09-12
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Structure of PR-10 Allergen Ara h 8.01.
To Be Published
5W97
DownloadVisualize
BU of 5w97 by Molmil
Crystal Structure of CO-bound Cytochrome c Oxidase determined by Serial Femtosecond X-Ray Crystallography at Room Temperature
分子名称: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE, (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE, ...
著者Rousseau, D.L, Yeh, S.-R, Ishigami, I, Zatsepin, N.A, Grant, T.D, Fromme, P, Fromme, R.
登録日2017-06-22
公開日2017-08-09
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of CO-bound cytochrome c oxidase determined by serial femtosecond X-ray crystallography at room temperature.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5FHY
DownloadVisualize
BU of 5fhy by Molmil
Crystal structure of FliD (HAP2) from Pseudomonas aeruginosa PAO1
分子名称: B-type flagellar hook-associated protein 2, SODIUM ION
著者Postel, S, Bonsor, D, Diederichs, K, Sundberg, E.J.
登録日2015-12-22
公開日2016-10-05
最終更新日2024-04-03
実験手法X-RAY DIFFRACTION (2.201 Å)
主引用文献Bacterial flagellar capping proteins adopt diverse oligomeric states.
Elife, 5, 2016
5GHN
DownloadVisualize
BU of 5ghn by Molmil
Crystal structure of human MTH1(G2K/D120N mutant) in complex with 2-oxo-dATP
分子名称: 7,8-dihydro-8-oxoguanine triphosphatase, SODIUM ION, [[(2R,3S,5R)-5-(6-azanyl-2-oxidanylidene-1H-purin-9-yl)-3-oxidanyl-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate
著者Nakamura, T, Waz, S, Hirata, K, Nakabeppu, Y, Yamagata, Y.
登録日2016-06-20
公開日2017-01-04
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.391 Å)
主引用文献Structural and Kinetic Studies of the Human Nudix Hydrolase MTH1 Reveal the Mechanism for Its Broad Substrate Specificity
J. Biol. Chem., 292, 2017
6TFE
DownloadVisualize
BU of 6tfe by Molmil
Crystal structure of the ADP-binding domain of the NAD+ riboswitch with N6-Methyl-adenosine-5'-triphosphate (m6ATP)
分子名称: BROMIDE ION, Chains: A, MAGNESIUM ION, ...
著者Huang, L, Lilley, D.M.J.
登録日2019-11-14
公開日2020-09-23
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure and ligand binding of the ADP-binding domain of the NAD+ riboswitch.
Rna, 26, 2020
6TJJ
DownloadVisualize
BU of 6tjj by Molmil
Structure of Cerezyme at pH 4.6
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ACETATE ION, ...
著者Rowland, R.J, Davies, G.J.
登録日2019-11-26
公開日2020-06-10
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献A baculoviral system for the production of human beta-glucocerebrosidase enables atomic resolution analysis.
Acta Crystallogr D Struct Biol, 76, 2020
5YL8
DownloadVisualize
BU of 5yl8 by Molmil
The crystal structure of inactive dimeric peptidyl-tRNA hydrolase from Acinetobacter baumannii at 1.79 A resolution
分子名称: Peptidyl-tRNA hydrolase, SODIUM ION
著者Bairagya, H.R, Sharma, P, Iqbal, N, Singh, P.K, Kaur, P, Sharma, S, Singh, T.P.
登録日2017-10-17
公開日2017-11-01
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献The crystal structure of inactive dimeric peptidyl-tRNA hydrolase from Acinetobacter baumannii at 1.79 A resolution
To Be Published
4H1T
DownloadVisualize
BU of 4h1t by Molmil
X-RAY Structure of the Complex VchUPh with Phosphate ion at 1.92A Resolution.
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, DI(HYDROXYETHYL)ETHER, ...
著者Prokofev, I.I, Lashkov, A.A, Gabdoulkhakov, A.G, Sotnichenko, S.E, Betzel, C, Mikhailov, A.M.
登録日2012-09-11
公開日2013-09-11
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.924 Å)
主引用文献X-RAY Structure of the Complex VchUPh with Phosphate ion at 1.92A Resolution.
TO BE PUBLISHED
4DPP
DownloadVisualize
BU of 4dpp by Molmil
The structure of dihydrodipicolinate synthase 2 from Arabidopsis thaliana
分子名称: Dihydrodipicolinate synthase 2, chloroplastic, SODIUM ION
著者Griffin, M.D.W, Billakanti, J.M, Gerrard, J.A, Dobson, R.C.J, Pearce, F.G.
登録日2012-02-14
公開日2012-07-18
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Characterisation of the first enzymes committed to lysine biosynthesis in Arabidopsis thaliana
Plos One, 7, 2012
6BXR
DownloadVisualize
BU of 6bxr by Molmil
Crystal structure of Toxoplasma gondii Mitochondrial Association Factor 1 B (MAF1B)
分子名称: BROMIDE ION, GLYCEROL, Mitochondrial association factor 1, ...
著者Parker, M.L, Ramaswamy, R, Boulanger, M.J.
登録日2017-12-18
公開日2018-12-19
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献A Toxoplasma gondii locus required for the direct manipulation of host mitochondria has maintained multiple ancestral functions.
Mol. Microbiol., 108, 2018
5WAU
DownloadVisualize
BU of 5wau by Molmil
Crystal Structure of CO-bound Cytochrome c Oxidase determined by Synchrotron X-Ray Crystallography at 100 K
分子名称: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE, (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE, ...
著者Fromme, R, Ishigami, I, Yeh, S.Y, Zatsepin, N, Grant, T, Fromme, P, Rousseau, D.
登録日2017-06-27
公開日2017-08-09
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure of CO-bound cytochrome c oxidase determined by serial femtosecond X-ray crystallography at room temperature.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
6RP4
DownloadVisualize
BU of 6rp4 by Molmil
CDT of SidD, deAMPylase from Legionella pneumophila
分子名称: Adenosine monophosphate-protein hydrolase SidD, GLYCEROL, MAGNESIUM ION, ...
著者Tascon, I, Lucas, M, Rojas, A.L, Hierro, A.
登録日2019-05-13
公開日2020-10-07
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structural insight into the membrane targeting domain of the Legionella deAMPylase SidD.
Plos Pathog., 16, 2020

222415

件を2024-07-10に公開中

PDB statisticsPDBj update infoContact PDBjnumon