Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8UDV
DownloadVisualize
BU of 8udv by Molmil
The X-RAY co-crystal structure of human FGFR3 V555M and Compound 17
分子名称: 1,2-ETHANEDIOL, 3-[(6-chloro-1-cyclopropyl-1H-benzimidazol-5-yl)ethynyl]-1-[(3S,5S)-5-(methoxymethyl)-1-(prop-2-enoyl)pyrrolidin-3-yl]-5-(methylamino)-1H-pyrazole-4-carboxamide, Fibroblast growth factor receptor 3, ...
著者Tyhonas, J.S, Arnold, L.D, Cox, J, Franovic, A, Gardiner, E, Grandinetti, K, Kania, R, Kanouni, T, Lardy, M, Li, C, Martin, E.S, Miller, N, Mohan, A, Murphy, E.A, Perez, M, Soroceanu, L, Timple, N, Uryu, S, Womble, S, Kaldor, S.W.
登録日2023-09-29
公開日2024-02-07
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.348 Å)
主引用文献Discovery of KIN-3248, An Irreversible, Next Generation FGFR Inhibitor for the Treatment of Advanced Tumors Harboring FGFR2 and/or FGFR3 Gene Alterations.
J.Med.Chem., 67, 2024
8UDU
DownloadVisualize
BU of 8udu by Molmil
The X-RAY co-crystal structure of human FGFR3 and Compound 17
分子名称: 3-[(6-chloro-1-cyclopropyl-1H-benzimidazol-5-yl)ethynyl]-1-[(3S,5S)-5-(methoxymethyl)-1-(prop-2-enoyl)pyrrolidin-3-yl]-5-(methylamino)-1H-pyrazole-4-carboxamide, CHLORIDE ION, Fibroblast growth factor receptor 3
著者Tyhonas, J.S, Arnold, L.D, Cox, J, Franovic, A, Gardiner, E, Grandinetti, K, Kania, R, Kanouni, T, Lardy, M, Li, C, Martin, E.S, Miller, N, Mohan, A, Murphy, E.A, Perez, M, Soroceanu, L, Timple, N, Uryu, S, Womble, S, Kaldor, S.W.
登録日2023-09-29
公開日2024-02-07
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.737 Å)
主引用文献Discovery of KIN-3248, An Irreversible, Next Generation FGFR Inhibitor for the Treatment of Advanced Tumors Harboring FGFR2 and/or FGFR3 Gene Alterations.
J.Med.Chem., 67, 2024
8UDT
DownloadVisualize
BU of 8udt by Molmil
The X-RAY co-crystal structure of human FGFR3 and KIN-3248
分子名称: 3-[(1-cyclopropyl-4,6-difluoro-1H-benzimidazol-5-yl)ethynyl]-1-[(3R,5R)-5-(methoxymethyl)-1-propanoylpyrrolidin-3-yl]-5-(methylamino)-1H-pyrazole-4-carboxamide, D-MALATE, Fibroblast growth factor receptor 3
著者Tyhonas, J.S, Arnold, L.D, Cox, J, Franovic, A, Gardiner, E, Grandinetti, K, Kania, R, Kanouni, T, Lardy, M, Li, C, Martin, E.S, Miller, N, Mohan, A, Murphy, E.A, Perez, M, Soroceanu, L, Timple, N, Uryu, S, Womble, S, Kaldor, S.W.
登録日2023-09-29
公開日2024-02-07
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.829 Å)
主引用文献Discovery of KIN-3248, An Irreversible, Next Generation FGFR Inhibitor for the Treatment of Advanced Tumors Harboring FGFR2 and/or FGFR3 Gene Alterations.
J.Med.Chem., 67, 2024
8UDL
DownloadVisualize
BU of 8udl by Molmil
Human Mitochondrial DNA Polymerase Gamma Binary Complex
分子名称: DNA (5'-D(P*AP*AP*AP*AP*CP*GP*AP*CP*GP*GP*CP*CP*AP*GP*TP*GP*CP*CP*AP*TP*AP*C)-3'), DNA (5'-D(P*AP*GP*GP*TP*AP*TP*GP*GP*CP*AP*CP*TP*GP*GP*CP*CP*GP*TP*CP*GP*TP*TP*TP*T)-3'), DNA polymerase subunit gamma-1, ...
著者Park, J, Yin, Y.W.
登録日2023-09-28
公開日2024-06-05
実験手法ELECTRON MICROSCOPY (2.37 Å)
主引用文献An interaction network in the polymerase active site is a prerequisite for Watson-Crick base pairing in Pol gamma.
Sci Adv, 10, 2024
8UDK
DownloadVisualize
BU of 8udk by Molmil
Human Mitochondrial DNA Polymerase gamma R853A Ternary Complex
分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, DNA (24-MER), DNA (28-MER), ...
著者Park, J, Herrmann, G.K, Yin, Y.W.
登録日2023-09-28
公開日2024-06-05
実験手法X-RAY DIFFRACTION (3.43 Å)
主引用文献An interaction network in the polymerase active site is a prerequisite for Watson-Crick base pairing in Pol gamma.
Sci Adv, 10, 2024
8UDG
DownloadVisualize
BU of 8udg by Molmil
S1V2-72 Fab bound to EHA2 from influenza B/Malaysia/2506/2004
分子名称: Hemagglutinin, S1V2-72 heavy chain, S1V2-72 light chain
著者Finney, J, Kong, S, Walsh Jr, R.M, Harrison, S.C, Kelsoe, G.
登録日2023-09-28
公開日2023-11-15
最終更新日2024-01-10
実験手法ELECTRON MICROSCOPY (4.98 Å)
主引用文献Protective human antibodies against a conserved epitope in pre- and postfusion influenza hemagglutinin.
Proc.Natl.Acad.Sci.USA, 121, 2024
8UDC
DownloadVisualize
BU of 8udc by Molmil
Crystal structure of TcPINK1 in complex with CYC116
分子名称: (4P)-4-(2-amino-4-methyl-1,3-thiazol-5-yl)-N-[4-(morpholin-4-yl)phenyl]pyrimidin-2-amine, DI(HYDROXYETHYL)ETHER, SULFATE ION, ...
著者Veyron, S, Rasool, S, Trempe, J.F.
登録日2023-09-28
公開日2024-04-17
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural Characterization of a small-molecule inhibitor of PINK1, a precursor tool compound for the study of Parkinson's disease
To Be Published
8UD9
DownloadVisualize
BU of 8ud9 by Molmil
Structure of human constitutive 20S proteasome complexed with the inhibitor TDI-8304
分子名称: (7S,10S,13S)-N-cyclopentyl-10-[2-(morpholin-4-yl)ethyl]-9,12-dioxo-13-(2-oxopyrrolidin-1-yl)-2-oxa-8,11-diazabicyclo[13.3.1]nonadeca-1(19),15,17-triene-7-carboxamide, Proteasome subunit alpha type-1, Proteasome subunit alpha type-2, ...
著者Hsu, H.-C, Li, H.
登録日2023-09-28
公開日2023-12-20
最終更新日2024-01-03
実験手法ELECTRON MICROSCOPY (2.04 Å)
主引用文献Structures revealing mechanisms of resistance and collateral sensitivity of Plasmodium falciparum to proteasome inhibitors.
Nat Commun, 14, 2023
8UD8
DownloadVisualize
BU of 8ud8 by Molmil
Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolution
分子名称: (4S,5aS,8S,8aR)-4-(2-methylpropyl)-N-[(1R,5Z,7R,8R,9R,10R,11S,12R)-10,11,12-trihydroxy-7-methyl-13-oxa-2-thiabicyclo[7.3.1]tridec-5-en-8-yl]octahydro-2H-oxepino[2,3-c]pyrrole-8-carboxamide (non-preferred name), 16S Ribosomal RNA, 23S Ribosomal RNA, ...
著者Aleksandrova, E.V, Syroegin, E.A, Wu, K.J.Y, Tresco, B.I.C, Ramkissoon, A, See, D.N.Y, Liow, P, Dittemore, G.A, Yu, M, Testolin, G, Mitcheltree, M.J, Liu, R.Y, Svetlov, M.S, Myers, A.G, Polikanov, Y.S.
登録日2023-09-28
公開日2024-02-21
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献An antibiotic preorganized for ribosomal binding overcomes antimicrobial resistance.
Science, 383, 2024
8UD7
DownloadVisualize
BU of 8ud7 by Molmil
Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolution
分子名称: (4S,5aS,8S,8aR)-4-(2-methylpropyl)-N-[(1R,5Z,7R,8R,9R,10R,11S,12R)-10,11,12-trihydroxy-7-methyl-13-oxa-2-thiabicyclo[7.3.1]tridec-5-en-8-yl]octahydro-2H-oxepino[2,3-c]pyrrole-8-carboxamide (non-preferred name), 16S Ribosomal RNA, 23S Ribosomal RNA, ...
著者Aleksandrova, E.V, Syroegin, E.A, Wu, K.J.Y, Tresco, B.I.C, Ramkissoon, A, See, D.N.Y, Liow, P, Dittemore, G.A, Yu, M, Testolin, G, Mitcheltree, M.J, Liu, R.Y, Svetlov, M.S, Myers, A.G, Polikanov, Y.S.
登録日2023-09-28
公開日2024-02-21
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献An antibiotic preorganized for ribosomal binding overcomes antimicrobial resistance.
Science, 383, 2024
8UD6
DownloadVisualize
BU of 8ud6 by Molmil
Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolution
分子名称: (4S,5aS,8S,8aR)-4-(2-methylpropyl)-N-[(1R,5Z,7R,8R,9R,10R,11S,12R)-10,11,12-trihydroxy-7-methyl-13-oxa-2-thiabicyclo[7.3.1]tridec-5-en-8-yl]octahydro-2H-oxepino[2,3-c]pyrrole-8-carboxamide (non-preferred name), 16S Ribosomal RNA, 23S Ribosomal RNA, ...
著者Aleksandrova, E.V, Syroegin, E.A, Wu, K.J.Y, Tresco, B.I.C, Ramkissoon, A, See, D.N.Y, Liow, P, Dittemore, G.A, Yu, M, Testolin, G, Mitcheltree, M.J, Liu, R.Y, Svetlov, M.S, Myers, A.G, Polikanov, Y.S.
登録日2023-09-28
公開日2024-02-21
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献An antibiotic preorganized for ribosomal binding overcomes antimicrobial resistance.
Science, 383, 2024
8UD5
DownloadVisualize
BU of 8ud5 by Molmil
SARS-CoV-2 Nsp15 bound to poly(A/U) RNA, state 2
分子名称: Non-structural protein 15, RNA (35-MER)
著者Ito, F, Yang, H, Zhou, Z.H, Chen, X.S.
登録日2023-09-28
公開日2024-04-24
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.13 Å)
主引用文献Structural basis for polyuridine tract recognition by SARS-CoV-2 Nsp15.
Protein Cell, 15, 2024
8UD4
DownloadVisualize
BU of 8ud4 by Molmil
SARS-CoV-2 Nsp15 bound to poly(A/U) RNA, state 1
分子名称: Non-structural protein 15, RNA (35-MER)
著者Ito, F, Yang, H, Zhou, Z.H, Chen, X.S.
登録日2023-09-28
公開日2024-04-24
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (3.25 Å)
主引用文献Structural basis for polyuridine tract recognition by SARS-CoV-2 Nsp15.
Protein Cell, 15, 2024
8UD3
DownloadVisualize
BU of 8ud3 by Molmil
SARS-CoV-2 Nsp15 bound to poly(A/U) RNA, consensus form
分子名称: Non-structural protein 15, RNA (35-MER)
著者Ito, F, Yang, H, Zhou, Z.H, Chen, X.S.
登録日2023-09-28
公開日2024-04-24
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (2.67 Å)
主引用文献Structural basis for polyuridine tract recognition by SARS-CoV-2 Nsp15.
Protein Cell, 15, 2024
8UD2
DownloadVisualize
BU of 8ud2 by Molmil
SARS-CoV-2 Nsp15, apo-form
分子名称: Non-structural protein 15
著者Ito, F, Yang, H, Zhou, Z.H, Chen, X.S.
登録日2023-09-28
公開日2024-04-24
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (2.33 Å)
主引用文献Structural basis for polyuridine tract recognition by SARS-CoV-2 Nsp15.
Protein Cell, 15, 2024
8UD1
DownloadVisualize
BU of 8ud1 by Molmil
High resolution in-situ structure of complex I in respiratory supercomplex (composite)
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, CARDIOLIPIN, ...
著者Zheng, W, Zhu, J, Zhang, K.
登録日2023-09-27
公開日2024-06-19
最終更新日2024-07-17
実験手法ELECTRON MICROSCOPY (2.1 Å)
主引用文献High-resolution in situ structures of mammalian respiratory supercomplexes.
Nature, 631, 2024
8UD0
DownloadVisualize
BU of 8ud0 by Molmil
Sterile Alpha Motif (SAM) domain from Tric1 from Arabidopsis thaliana - G241E mutant
分子名称: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Chloroplastic import inner membrane translocase subunit HP30-1
著者Olasz, B, Vrielink, A, Smithers, L.
登録日2023-09-27
公開日2024-05-01
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Structural analysis of the SAM domain of the Arabidopsis mitochondrial tRNA import receptor.
J.Biol.Chem., 300, 2024
8UCZ
DownloadVisualize
BU of 8ucz by Molmil
Sterile Alpha Motif (SAM) domain from Tric1 from Arabidopsis thaliana - D235A mutant
分子名称: CHLORIDE ION, Chloroplastic import inner membrane translocase subunit HP30-1
著者Olasz, B, Vrielink, A, Smithers, L.
登録日2023-09-27
公開日2024-05-01
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Structural analysis of the SAM domain of the Arabidopsis mitochondrial tRNA import receptor.
J.Biol.Chem., 300, 2024
8UCY
DownloadVisualize
BU of 8ucy by Molmil
Sterile Alpha Motif (SAM) domain from Tric1, Arabidopsis thaliana
分子名称: CHLORIDE ION, Chloroplastic import inner membrane translocase subunit HP30-1
著者Olasz, B, Vrielink, A, Evans, G.L.
登録日2023-09-27
公開日2024-05-08
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Structural analysis of the SAM domain of the Arabidopsis mitochondrial tRNA import receptor.
J.Biol.Chem., 300, 2024
8UCX
DownloadVisualize
BU of 8ucx by Molmil
Dihydrofolate Reductase Complexed with Folate
分子名称: Dihydrofolate reductase, FOLIC ACID, MANGANESE (II) ION
著者Fried, S.D.E, Boxer, S.G.
登録日2023-09-27
公開日2023-10-11
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献Role of Electrostatics in Hydride Transfer by Dihydrofolate Reductase
To Be Published
8UCW
DownloadVisualize
BU of 8ucw by Molmil
Complete DNA termination subcomplex 2 of Xenopus laevis DNA polymerase alpha-primase
分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, DNA polymerase alpha catalytic subunit, DNA template, ...
著者Mullins, E.A, Chazin, W.C, Eichman, B.F.
登録日2023-09-27
公開日2023-10-11
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.64 Å)
主引用文献A mechanistic model of primer synthesis from catalytic structures of DNA polymerase alpha-primase.
Nat.Struct.Mol.Biol., 31, 2024
8UCV
DownloadVisualize
BU of 8ucv by Molmil
Complete DNA termination subcomplex 1 of Xenopus laevis DNA polymerase alpha-primase
分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, DNA polymerase alpha catalytic subunit, DNA primase large subunit, ...
著者Mullins, E.A, Chazin, W.C, Eichman, B.F.
登録日2023-09-27
公開日2023-10-11
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.81 Å)
主引用文献A mechanistic model of primer synthesis from catalytic structures of DNA polymerase alpha-primase.
Nat.Struct.Mol.Biol., 31, 2024
8UCU
DownloadVisualize
BU of 8ucu by Molmil
Partial DNA termination subcomplex of Xenopus laevis DNA polymerase alpha-primase
分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, DNA polymerase alpha catalytic subunit, DNA template, ...
著者Mullins, E.A, Chazin, W.J, Eichman, B.F.
登録日2023-09-27
公開日2023-10-11
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.85 Å)
主引用文献A mechanistic model of primer synthesis from catalytic structures of DNA polymerase alpha-primase.
Nat.Struct.Mol.Biol., 31, 2024
8UCT
DownloadVisualize
BU of 8uct by Molmil
Crystal structure of TcPINK1 in complex with PRT
分子名称: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, 2-{[(1R,2S)-2-aminocyclohexyl]amino}-4-{[3-(2H-1,2,3-triazol-2-yl)phenyl]amino}pyrimidine-5-carboxamide, SULFATE ION, ...
著者Veyron, S, Rasool, S, Trempe, J.F.
登録日2023-09-27
公開日2024-05-08
実験手法X-RAY DIFFRACTION (2.93 Å)
主引用文献Characterization of a new family of PINK1 inhibitors
To Be Published
8UCS
DownloadVisualize
BU of 8ucs by Molmil
Cryo-EM structure of the flagellar MotAB stator bound to FliG
分子名称: Flagellar motor switch protein FliG, Motility protein A, OmpA family protein
著者Deme, J.C, Johnson, S, Lea, S.M.
登録日2023-09-27
公開日2024-01-24
最終更新日2024-05-22
実験手法ELECTRON MICROSCOPY (2.4 Å)
主引用文献Structural basis of directional switching by the bacterial flagellum.
Nat Microbiol, 9, 2024

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon