PDB: 238582 件ウェブページステータス検索Chemie searchBIRD

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9OGK	Refinement of PDB-3J5R against EMD-8117 using EMAN2 分子名称: Transient receptor potential cation channel subfamily V member 1 著者 Chen, M. 登録日 2025-04-30 公開日 2025-06-04 実験手法 ELECTRON MICROSCOPY (4.2 Å) 主引用文献 Building molecular model series from heterogeneous CryoEM structures using Gaussian mixture models and deep neural networks. Commun Biol, 8, 2025
6XSJ	X-ray structure of a monoclinic form of alpha amylase from Aspergillus at 1.4 A resolution 分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 McPherson, A. 登録日 2020-07-15 公開日 2020-10-14 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Structures of two novel crystal forms of Aspergillus oryzae alpha amylase (taka-amylase). J.Biosci.Bioeng., 131, 2021
6HOR	Human protein kinase CK2 alpha in complex with feruloylmethane 分子名称: (~{E})-4-(3-methoxy-4-oxidanyl-phenyl)but-3-en-2-one, 1,2-ETHANEDIOL, Casein kinase II subunit alpha, ... 著者 Battistutta, R, Lolli, G. 登録日 2018-09-18 公開日 2019-10-02 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Biochemical and cellular mechanism of protein kinase CK2 inhibition by deceptive curcumin. Febs J., 287, 2020
9O38	Transmembrane domains of the human sweet receptor (TAS1R2 + TAS1R3) from Class 3 particles (rigidly fitted from PDB:9NOX and 9NOR) 分子名称: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Nanobody 35 (NB35), ... 著者 Juen, Z, Lu, Z, Yu, R, Chang, A.N, Wang, B, Fitzpatrick, A.W.P, Zuker, C.S. 登録日 2025-04-06 公開日 2025-05-14 最終更新日 2025-05-21 実験手法 ELECTRON MICROSCOPY (3 Å) 主引用文献 The structure of human sweetness. Cell, 2025
8I5S	Crystal structure of TxGH116 D593N acid/base mutant from Thermoanaerobacterium xylanolyticum with 2-deoxy-2-fluoroglucoside 分子名称: 1,2-ETHANEDIOL, 2,4-dinitrophenyl 2-deoxy-2-fluoro-beta-D-glucopyranoside, 2-deoxy-2-fluoro-alpha-D-glucopyranose, ... 著者 Pengthaisong, S, Ketudat Cairns, J.R. 登録日 2023-01-26 公開日 2023-05-03 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.45 Å) 主引用文献 Reaction Mechanism of Glycoside Hydrolase Family 116 Utilizes Perpendicular Protonation. Acs Catalysis, 13, 2023
3FUB	Crystal structure of GDNF-GFRalpha1 complex 分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Parkash, V, Goldman, A. 登録日 2009-01-14 公開日 2009-06-02 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (2.35 Å) 主引用文献 Comparison of GFL-GFRalpha complexes: further evidence relating GFL bend angle to RET signalling Acta Crystallogr.,Sect.F, 65, 2009
7O07	14-3-3sigma covalently bound to peptide (chloroacetamide-Cys interaction) 分子名称: 14-3-3 protein sigma, MAGNESIUM ION, Transcriptional coactivator YAP1 著者 Somsen, B.A, Ottmann, C. 登録日 2021-03-25 公開日 2021-10-13 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.2 Å) 主引用文献 Covalent flexible peptide docking in Rosetta. Chem Sci, 12, 2021
3EV0	Crystal Structure of Ribonuclease A in 70% Dimethyl Sulfoxide 分子名称: DIMETHYL SULFOXIDE, Ribonuclease pancreatic 著者 Dechene, M, Wink, G, Smith, M, Swartz, P, Mattos, C. 登録日 2008-10-12 公開日 2009-06-23 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (1.76 Å) 主引用文献 Multiple solvent crystal structures of ribonuclease A: An assessment of the method Proteins, 76, 2009
3EV3	Crystal Structure of Ribonuclease A in 70% t-Butanol 分子名称: Ribonuclease pancreatic, TERTIARY-BUTYL ALCOHOL 著者 Dechene, M, Wink, G, Smith, M, Swartz, P, Mattos, C. 登録日 2008-10-12 公開日 2009-06-23 最終更新日 2024-11-13 実験手法 X-RAY DIFFRACTION (1.68 Å) 主引用文献 Multiple solvent crystal structures of ribonuclease A: An assessment of the method Proteins, 76, 2009
3EUY	Crystal Structure of Ribonuclease A in 50% Dioxane 分子名称: 1,4-DIETHYLENE DIOXIDE, Ribonuclease pancreatic 著者 Dechene, M, Wink, G, Smith, M, Swartz, P, Mattos, C. 登録日 2008-10-12 公開日 2009-06-23 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Multiple solvent crystal structures of ribonuclease A: An assessment of the method Proteins, 76, 2009
3EV6	Crystal Structure of Ribonuclease A in 50% R,S,R-Bisfuranol 分子名称: (3R,3aS,6aR)-hexahydrofuro[2,3-b]furan-3-ol, Ribonuclease pancreatic 著者 Dechene, M, Wink, G, Smith, M, Swartz, P, Mattos, C. 登録日 2008-10-12 公開日 2009-06-23 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (1.76 Å) 主引用文献 Multiple solvent crystal structures of ribonuclease A: An assessment of the method Proteins, 76, 2009
3EUX	Crystal Structure of Crosslinked Ribonuclease A 分子名称: Ribonuclease pancreatic 著者 Dechene, M, Wink, G, Smith, M, Swartz, P, Mattos, C. 登録日 2008-10-12 公開日 2009-06-23 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Multiple solvent crystal structures of ribonuclease A: An assessment of the method Proteins, 76, 2009
3EV4	Crystal Structure of Ribonuclease A in 50% Trifluoroethanol 分子名称: Ribonuclease pancreatic, TRIFLUOROETHANOL 著者 Dechene, M, Wink, G, Smith, M, Swartz, P, Mattos, C. 登録日 2008-10-12 公開日 2009-06-23 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (1.93 Å) 主引用文献 Multiple solvent crystal structures of ribonuclease A: An assessment of the method Proteins, 76, 2009
3EUZ	Crystal Structure of Ribonuclease A in 50% Dimethylformamide 分子名称: DIMETHYLFORMAMIDE, Ribonuclease pancreatic 著者 Dechene, M, Wink, G, Smith, M, Swartz, P, Mattos, C. 登録日 2008-10-12 公開日 2009-06-23 最終更新日 2024-10-16 実験手法 X-RAY DIFFRACTION (1.84 Å) 主引用文献 Multiple solvent crystal structures of ribonuclease A: An assessment of the method Proteins, 76, 2009
3EV1	Crystal Structure of Ribonuclease A in 70% Hexanediol 分子名称: HEXANE-1,6-DIOL, Ribonuclease pancreatic 著者 Dechene, M, Wink, G, Smith, M, Swartz, P, Mattos, C. 登録日 2008-10-12 公開日 2009-06-23 最終更新日 2024-10-09 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 Multiple solvent crystal structures of ribonuclease A: An assessment of the method Proteins, 76, 2009
3EV2	Crystal Structure of Ribonuclease A in 70% Isopropanol 分子名称: ISOPROPYL ALCOHOL, Ribonuclease pancreatic 著者 Dechene, M, Wink, G, Smith, M, Swartz, P, Mattos, C. 登録日 2008-10-12 公開日 2009-06-23 最終更新日 2024-11-20 実験手法 X-RAY DIFFRACTION (2.02 Å) 主引用文献 Multiple solvent crystal structures of ribonuclease A: An assessment of the method Proteins, 76, 2009
3EV5	Crystal Structure of Ribonuclease A in 1M Trimethylamine N-Oxide 分子名称: Ribonuclease pancreatic, trimethylamine oxide 著者 Dechene, M, Wink, G, Smith, M, Swartz, P, Mattos, C. 登録日 2008-10-12 公開日 2009-06-23 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (1.68 Å) 主引用文献 Multiple solvent crystal structures of ribonuclease A: An assessment of the method Proteins, 76, 2009
6XSV	X-ray structure of a tetragonal crystal form of alpha amylase from Aspergillus oryzae (Tala-Amylase) at 1.65 A resolution 分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha-amylase, ... 著者 McPherson, A. 登録日 2020-07-16 公開日 2020-10-14 最終更新日 2024-10-23 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 Structures of two novel crystal forms of Aspergillus oryzae alpha amylase (taka-amylase). J.Biosci.Bioeng., 131, 2021
6TO0	Structure of E70A mutant of Rex8A from Paenibacillus barcinonensis complexed with 2(3)-alpha-L-arabinofuranosyl-xylotriose. 分子名称: GLYCEROL, Reducing-end xylose-releasing exo-oligoxylanase Rex8A, alpha-L-arabinofuranose-(1-2)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose-(1-4)-beta-D-xylopyranose 著者 Jimenez-Ortega, E, Ramirez-Escudero, M, Sanz-Aparicio, J. 登録日 2019-12-11 公開日 2020-05-27 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.88 Å) 主引用文献 Structural analysis of the reducing-end xylose-releasing exo-oligoxylanase Rex8A from Paenibacillus barcinonensis BP-23 deciphers its molecular specificity. Febs J., 287, 2020
7DFS	Crystal structure of a novel 4-O-alpha-L-rhamnosyl-beta-D-glucuronidase from Fusarium oxysporum 12S - Rha-GlcA complex 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-O-alpha-L-rhamnosyl-beta-D-glucuronidase, alpha-D-mannopyranose, ... 著者 Kondo, T, Arakawa, T, Fushinobu, S, Sakamoto, T. 登録日 2020-11-09 公開日 2021-03-17 最終更新日 2024-10-30 実験手法 X-RAY DIFFRACTION (1.49 Å) 主引用文献 Biochemical and structural characterization of a novel 4-O-alpha-l-rhamnosyl-beta-d-glucuronidase from Fusarium oxysporum. Febs J., 288, 2021
8D6K	Sco GlgEI-V279S in complex with cyclohexyl carbasugar 分子名称: (1R,4S,5S,6R)-4-(cyclohexylamino)-5,6-dihydroxy-2-(hydroxymethyl)cyclohex-2-en-1-yl alpha-D-glucopyranoside, Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase 1, DI(HYDROXYETHYL)ETHER 著者 Jayasinghe, T.J, Ronning, D.R. 登録日 2022-06-06 公開日 2022-10-19 最終更新日 2023-10-18 実験手法 X-RAY DIFFRACTION (2.73 Å) 主引用文献 Synthesis of C 7 /C 8 -cyclitols and C 7 N-aminocyclitols from maltose and X-ray crystal structure of Streptomyces coelicolor GlgEI V279S in a complex with an amylostatin GXG-like derivative. Front Chem, 10, 2022
6R35	Structure of the LecB lectin from Pseudomonas aeruginosa strain PAO1 in complex with lewis x tetrasaccharide 分子名称: 1,2-ETHANEDIOL, CALCIUM ION, Fucose-binding lectin PA-IIL, ... 著者 Lepsik, M, Sommer, R, Kuhaudomlarp, S, Lelimousin, M, Varrot, A, Titz, A, Imberty, A. 登録日 2019-03-19 公開日 2019-06-12 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Induction of rare conformation of oligosaccharide by binding to calcium-dependent bacterial lectin: X-ray crystallography and modelling study. Eur.J.Med.Chem., 177, 2019
5E4J	Acetylcholinesterase Methylene Blue no PEG 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Acetylcholinesterase, DECAMETHONIUM ION, ... 著者 Dym, O. 登録日 2015-10-06 公開日 2016-03-30 最終更新日 2024-11-06 実験手法 X-RAY DIFFRACTION (2.54 Å) 主引用文献 The impact of crystallization conditions on structure-based drug design: A case study on the methylene blue/acetylcholinesterase complex. Protein Sci., 25, 2016
3DV2	Crystal Structure of nicotinic acid mononucleotide adenylyltransferase from Bacillus anthracis 分子名称: Nicotinate (Nicotinamide) nucleotide adenylyltransferase, SULFATE ION 著者 Lu, S, Smith, C.D, Yang, Z, Pruett, P.S, Nagy, L, McCombs, D.P, DeLucas, L.J, Brouillette, W.J, Brouillette, C.G. 登録日 2008-07-18 公開日 2008-11-04 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structure of nicotinic acid mononucleotide adenylyltransferase from Bacillus anthracis. ACTA CRYSTALLOGR.,SECT.F, 64, 2008
3FSJ	Crystal structure of benzoylformate decarboxylase in complex with the inhibitor MBP 分子名称: 3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-2-{(S)-hydroxy[(R)-hydroxy(methoxy)phosphoryl]phenylmethyl}-5-(2-{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}ethyl)-4-methyl-1,3-thiazol-3-ium, Benzoylformate decarboxylase, CALCIUM ION 著者 Brandt, G.S, Kenyon, G.L, McLeish, M.J, Jordan, F, Petsko, G.A, Ringe, D. 登録日 2009-01-09 公開日 2009-01-27 最終更新日 2023-09-06 実験手法 X-RAY DIFFRACTION (1.37 Å) 主引用文献 Snapshot of a reaction intermediate: analysis of benzoylformate decarboxylase in complex with a benzoylphosphonate inhibitor. Biochemistry, 48, 2009

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