PDB: 71589 件ウェブページステータス検索Chemie searchBIRD

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1DUC	EIAV DUTPASE DUDP/STRONTIUM COMPLEX 分子名称: DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE, DEOXYURIDINE-5'-DIPHOSPHATE, STRONTIUM ION 著者 Dauter, Z, Persson, R, Rosengren, A.M, Nyman, P.O, Wilson, K.S, Cedergren-Zeppezauer, E.S. 登録日 1997-11-29 公開日 1998-06-03 最終更新日 2024-05-22 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Crystal structure of dUTPase from equine infectious anaemia virus; active site metal binding in a substrate analogue complex. J.Mol.Biol., 285, 1999
1DUP	DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDO HYDROLASE (D-UTPASE) 分子名称: DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE 著者 Dauter, Z, Wilson, K.S, Larsson, G, Nyman, P.O, Cedergren, E. 登録日 1995-09-01 公開日 1995-11-14 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal structure of a dUTPase. Nature, 355, 1992
1DUN	EIAV DUTPASE NATIVE 分子名称: DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE 著者 Dauter, Z, Persson, R, Rosengren, A.M, Nyman, P.O, Wilson, K.S, Cedergren-Zeppezauer, E.S. 登録日 1997-11-27 公開日 1998-05-27 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal structure of dUTPase from equine infectious anaemia virus; active site metal binding in a substrate analogue complex. J.Mol.Biol., 285, 1999
2F1V	Outer membrane protein OmpW 分子名称: GLYCEROL, Outer membrane protein W 著者 van den Berg, B. 登録日 2005-11-15 公開日 2006-01-24 最終更新日 2023-08-23 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 The outer membrane protein OmpW forms an eight-stranded beta-barrel with a hydrophobic channel. J.Biol.Chem., 281, 2006
2JQ8	Solution structure of the Somatomedin B domain from vitronectin produced in Pichia pastoris 分子名称: Vitronectin 著者 Gaardsvoll, H, Hirschberg, D, Nielbo, S, Mayasundari, A, Peterson, C.B, Jansson, A, Jorgensen, T.J.D, Poulsen, F.M. 登録日 2007-05-30 公開日 2007-09-11 最終更新日 2023-12-20 実験手法 SOLUTION NMR 主引用文献 Solution structure of recombinant somatomedin B domain from vitronectin produced in Pichia pastoris Protein Sci., 16, 2007
1E4X	crossreactive binding of a circularized peptide to an anti-TGFalpha antibody Fab-fragment 分子名称: CYCLIC PEPTIDE, TAB2 著者 Hahn, M, Winkler, D, Misselwitz, R, Wessner, H, Welfle, K, Zahn, G, Schneider-Mergener, J, Hoehne, W. 登録日 2000-07-12 公開日 2001-07-12 最終更新日 2024-05-01 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Cross-Reactive Binding of Cyclic Peptides to an Anti-Tgf Alpha Antibody Fab Fragment: An X-Ray Structural and Thermodynamic Analysis J.Mol.Biol., 314, 2001
1E4W	crossreactive binding of a circularized peptide to an anti-TGFalpha antibody Fab-fragment 分子名称: CHLORIDE ION, CYCLIC PEPTIDE, NICKEL (II) ION, ... 著者 Hahn, M, Winkler, D, Misselwitz, R, Wessner, H, Welfle, K, Zahn, G, Schneider-Mergener, J, Hoehne, W. 登録日 2000-07-12 公開日 2001-07-12 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Cross-Reactive Binding of Cyclic Peptides to an Anti-Tgf Alpha Antibody Fab Fragment: An X-Ray Structural and Thermodynamic Analysis J.Mol.Biol., 314, 2001
1NIK	Wild Type RNA Polymerase II 分子名称: DNA-directed RNA polymerase I, II and III 23 kDa polypeptide, DNA-directed RNA polymerase II, ... 著者 Bushnell, D.A, Kornberg, R.D. 登録日 2002-12-24 公開日 2003-04-29 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (4.1 Å) 主引用文献 Complete, 12-subunit RNA Polymerase II at 4.1-A resolution: implications for the initiation of transcription. Proc.Natl.Acad.Sci.USA, 100, 2003
3IBP	The Crystal Structure of the Dimerization Domain of Escherichia coli Structural Maintenance of Chromosomes Protein MukB 分子名称: AMMONIUM ION, Chromosome partition protein mukB 著者 Li, Y, Schoeffler, A.J, Berger, J.M, Oakley, M.G. 登録日 2009-07-16 公開日 2010-01-26 最終更新日 2017-11-01 実験手法 X-RAY DIFFRACTION (3.099 Å) 主引用文献 The crystal structure of the hinge domain of the Escherichia coli structural maintenance of chromosomes protein MukB. J.Mol.Biol., 395, 2010
2X7P	The Conserved Candida albicans CA3427 Gene Product Defines a New Family of Proteins Exhibiting the Generic Periplasmic Binding Protein Structural Fold 分子名称: 2-(2-ETHOXYETHOXY)ETHANOL, ACETIC ACID, CALCIUM ION, ... 著者 Santini, S, Monchois, V, Mouz, N, Rousselle, T, Claverie, J.M, Abergel, C. 登録日 2010-03-03 公開日 2011-03-16 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.34 Å) 主引用文献 The Conserved Candida Albicans Ca3427 Gene Product Defines a New Family of Proteins Exhibiting the Generic Periplasmic Binding Protein Structural Fold Plos One, 6, 2011
1ORT	ORNITHINE TRANSCARBAMOYLASE FROM PSEUDOMONAS AERUGINOSA 分子名称: ORNITHINE TRANSCARBAMOYLASE 著者 Villeret, V, Dideberg, O. 登録日 1995-08-24 公開日 1996-12-07 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (3 Å) 主引用文献 Crystal structure of Pseudomonas aeruginosa catabolic ornithine transcarbamoylase at 3.0-A resolution: a different oligomeric organization in the transcarbamoylase family. Proc.Natl.Acad.Sci.USA, 92, 1995
2IY3	Structure of the E. Coli Signal Regognition Particle 分子名称: 4.5S RNA, SIGNAL SEQUENCE, Signal recognition particle protein,Signal recognition particle 54 kDa protein 著者 Schaffitzel, C, Oswald, M, Berger, I, Ishikawa, T, Abrahams, J.P, Koerten, H.K, Koning, R.I, Ban, N. 登録日 2006-07-12 公開日 2006-11-02 最終更新日 2024-05-08 実験手法 ELECTRON MICROSCOPY (16 Å) 主引用文献 Structure of the E. Coli Signal Recognition Particle Bound to a Translating Ribosome Nature, 444, 2006
6YQ7	Taka-amylase 分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha-amylase, ... 著者 Armstrong, Z, Chen, Y, Artola, M, Overkleeft, H, Davies, G. 登録日 2020-04-16 公開日 2020-06-10 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.58 Å) 主引用文献 Activity-Based Protein Profiling of Retaining alpha-Amylases in Complex Biological Samples. J.Am.Chem.Soc., 143, 2021
6YQ9	Taka-amylase in complex with alpha-glucosyl epi-cyclophellitol epoxide inhibitor 分子名称: (1R,2R,3S,5R,6S)-2,3,5-trihydroxy-6-(hydroxymethyl)cyclohexyl alpha-D-glucopyranoside, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Armstrong, Z, Chen, Y, Artola, M, Overkleeft, H, Davies, G. 登録日 2020-04-16 公開日 2021-02-10 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 Activity-Based Protein Profiling of Retaining alpha-Amylases in Complex Biological Samples. J.Am.Chem.Soc., 143, 2021
6YQC	Taka-amylase in complex with alpha-glucosyl epi-cyclophellitol epoxide inhibitor 分子名称: (1~{R},2~{S},4~{R},5~{S},6~{R})-6-[(2~{S},3~{R},4~{R},5~{S},6~{R})-5-heptoxy-6-(hydroxymethyl)-3,4-bis(oxidanyl)oxan-2-yl]oxy-5-(hydroxymethyl)cyclohexane-1,2,4-triol, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Armstrong, Z, Chen, Y, Artola, M, Overkleeft, H, Davies, G. 登録日 2020-04-16 公開日 2021-02-10 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.35 Å) 主引用文献 Activity-Based Protein Profiling of Retaining alpha-Amylases in Complex Biological Samples. J.Am.Chem.Soc., 143, 2021
6YQB	Taka-amylase in complex with alpha-glucosyl epi-cyclophellitol cyclosulfate inhibitor 分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, Alpha-amylase, ... 著者 Armstrong, Z, Chen, Y, Artola, M, Overkleeft, H, Davies, G. 登録日 2020-04-16 公開日 2021-02-10 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.5 Å) 主引用文献 Activity-Based Protein Profiling of Retaining alpha-Amylases in Complex Biological Samples. J.Am.Chem.Soc., 143, 2021
6YQA	Taka-amylase in complex with alpha-glucosyl epi-cyclophellitol aziridine inhibitor 分子名称: (1~{S},2~{R},3~{R},4~{R},5~{R})-5-(8-azanyloctylamino)-4-(hydroxymethyl)cyclohexane-1,2,3-triol, 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Armstrong, Z, Chen, Y, Artola, M, Overkleeft, H, Davies, G. 登録日 2020-04-16 公開日 2021-02-24 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (1.67 Å) 主引用文献 Activity-Based Protein Profiling of Retaining alpha-Amylases in Complex Biological Samples. J.Am.Chem.Soc., 143, 2021
1PU9	Crystal Structure of Tetrahymena GCN5 with Bound Coenzyme A and a 19-residue Histone H3 Peptide 分子名称: COENZYME A, HAT A1, Histone H3 著者 Clements, A, Poux, A.N, Lo, W.S, Pillus, L, Berger, S.L, Marmorstein, R. 登録日 2003-06-24 公開日 2003-09-23 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural basis for histone and phospho-histone binding by the GCN5 histone acetyltransferase Mol.Cell, 12, 2003
1KVH	NCSi-gb-bulge-DNA complex induced formation of a DNA bulge structure by a molecular wedge ligand-post-activated neocarzinostatin chromophore 分子名称: 5'-D(*CP*CP*CP*GP*AP*TP*GP*C)-3', 5'-D(*GP*CP*AP*AP*TP*TP*CP*GP*GP*G)-3', SPIRO[[7-METHOXY-5-METHYL-1,2-DIHYDRO-NAPHTHALENE]-3,1'-[5-HYDROXY-9-[2-METHYLAMINO-2,6-DIDEOXYGALACTOPYRANOSYL-OXY]-5-(2-OXO-[1,3]DIOXOLAN-4-YL)-3A,5,9,9A-TETRAHYDRO-3H-1-OXA-CYCLOPENTA[A]-S-INDACEN-2-ONE]] 著者 Gao, X, Stassinopoulos, A, Ji, J, Kwon, Y, Bare, S, Goldberg, I.H. 登録日 2002-01-26 公開日 2002-06-19 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Induced formation of a DNA bulge structure by a molecular wedge ligand-postactivated neocarzinostatin chromophore. Biochemistry, 41, 2002
2X4Z	Crystal Structure of the Human p21-Activated Kinase 4 in Complex with PF-03758309 分子名称: GLYCEROL, PF-3758309, SERINE/THREONINE-PROTEIN KINASE PAK 4 著者 Knighton, D.R, Deng, Y, Murray, B, Guo, C, Piraino, J, Westwick, J, Zhang, C, Lamerdin, J, Dagostino, E, Loi, C.-M, Zager, M, Kraynov, E, Christensen, J, Martinez, R, Kephart, S, Marakovits, J, Karlicek, S, Bergqvist, S, Smeal, T. 登録日 2010-02-03 公開日 2010-05-19 最終更新日 2019-01-23 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Small-Molecule P21-Activated Kinase Inhibitor Pf- 3758309 is a Potent Inhibitor of Oncogenic Signaling and Tumor Growth. Proc.Natl.Acad.Sci.USA, 107, 2010
8KG8	Yeast replisome in state II 分子名称: ADENOSINE-5'-DIPHOSPHATE, Cell division control protein 45, DNA (61-mer), ... 著者 Dang, S, Zhai, Y, Feng, J, Yu, D, Xu, Z. 登録日 2023-08-17 公開日 2023-12-06 実験手法 ELECTRON MICROSCOPY (4.23 Å) 主引用文献 Synergism between CMG helicase and leading strand DNA polymerase at replication fork. Nat Commun, 14, 2023
2IJ0	Structural basis of T cell specificity and activation by the bacterial superantigen toxic shock syndrome toxin-1 分子名称: Toxic shock syndrome toxin-1, penultimate affinity-matured variant of hVbeta 2.1, D10 著者 Moza, B, Varma, A.K, Buonpane, R.A, Zhu, P, Herfst, C.A, Nicholson, M.J, Wilbuer, A.K, Nulifer, S, Wucherpfenning, K.W, McCormick, J.K, Kranz, D.M, Sundberg, E.J. 登録日 2006-09-28 公開日 2007-02-20 最終更新日 2011-07-13 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Structural basis of T-cell specificity and activation by the bacterial superantigen TSST-1. Embo J., 26, 2007
8KG9	Yeast replisome in state III 分子名称: ADENOSINE-5'-DIPHOSPHATE, Cell division control protein 45, DNA (61-mer), ... 著者 Dang, S, Zhai, Y, Feng, J, Yu, D, Xu, Z. 登録日 2023-08-17 公開日 2023-12-06 実験手法 ELECTRON MICROSCOPY (4.52 Å) 主引用文献 Synergism between CMG helicase and leading strand DNA polymerase at replication fork. Nat Commun, 14, 2023
8KG6	Yeast replisome in state I 分子名称: ADENOSINE-5'-DIPHOSPHATE, Cell division control protein 45, Chromosome segregation in meiosis protein 3, ... 著者 Dang, S, Zhai, Y, Feng, J, Yu, D, Xu, Z. 登録日 2023-08-17 公開日 2023-12-06 実験手法 ELECTRON MICROSCOPY (3.07 Å) 主引用文献 Synergism between CMG helicase and leading strand DNA polymerase at replication fork. Nat Commun, 14, 2023
3JCS	2.8 Angstrom cryo-EM structure of the large ribosomal subunit from the eukaryotic parasite Leishmania 分子名称: 26S alpha ribosomal RNA, 26S delta ribosomal RNA, 26S epsilon ribosomal RNA, ... 著者 Shalev-Benami, M, Zhang, Y, Matzov, D, Halfon, Y, Zackay, A, Rozenberg, H, Zimmerman, E, Bashan, A, Jaffe, C.L, Yonath, A, Skiniotis, G. 登録日 2016-01-21 公開日 2016-07-20 最終更新日 2018-07-18 実験手法 ELECTRON MICROSCOPY (2.8 Å) 主引用文献 2.8- angstrom Cryo-EM Structure of the Large Ribosomal Subunit from the Eukaryotic Parasite Leishmania. Cell Rep, 16, 2016

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