PDB: 35756 件ウェブページステータス検索Chemie searchBIRD

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4RQ6	Human DNA Polymerase Beta With Gapped DNA Containing an 8-oxo-7,8-dihydro-Guanine(8-oxoG) and dATP soaked with MgCl2 for 80 s 分子名称: ACETATE ION, DNA (5'-D(*CP*CP*GP*AP*CP*(8OG)P*GP*CP*GP*CP*AP*TP*CP*AP*GP*C)-3'), DNA (5'-D(*GP*CP*TP*GP*AP*TP*GP*CP*GP*CP*A)-3'), ... 著者 Vyas, R, Suo, Z. 登録日 2014-10-31 公開日 2015-04-15 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (2.25 Å) 主引用文献 Viewing Human DNA Polymerase beta Faithfully and Unfaithfully Bypass an Oxidative Lesion by Time-Dependent Crystallography. J.Am.Chem.Soc., 137, 2015
1G07	CRYSTAL STRUCTURE OF T4 LYSOZYME MUTANT V149C 分子名称: 2-HYDROXYETHYL DISULFIDE, CHLORIDE ION, PROTEIN (LYSOZYME) 著者 Xu, J, Baase, W.A, Quillin, M.L, Matthews, B.W. 登録日 2000-10-05 公開日 2001-05-23 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Structural and thermodynamic analysis of the binding of solvent at internal sites in T4 lysozyme. Protein Sci., 10, 2001
1G1W	T4 LYSOZYME MUTANT C54T/C97A/Q105M 分子名称: BETA-MERCAPTOETHANOL, CHLORIDE ION, LYSOZYME 著者 Quillin, M.L, Matthews, B.W. 登録日 2000-10-13 公開日 2001-05-09 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structural and thermodynamic analysis of the binding of solvent at internal sites in T4 lysozyme. Protein Sci., 10, 2001
2EUN	Cytochrome c peroxidase (CCP) in complex with 2,4-diaminopyrimidine 分子名称: PROTOPORPHYRIN IX CONTAINING FE, PYRIMIDINE-2,4-DIAMINE, cytochrome c peroxidase 著者 Brenk, R, Vetter, S.W, Boyce, S.E, Goodin, D.B, Shoichet, B.K. 登録日 2005-10-29 公開日 2006-04-11 最終更新日 2024-02-14 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 Probing molecular docking in a charged model binding site. J.Mol.Biol., 357, 2006
1XRX	Crystal structure of a DNA-binding protein 分子名称: CALCIUM ION, SeqA protein 著者 Guarne, A, Brendler, T, Zhao, Q, Ghirlando, R, Austin, S, Yang, W. 登録日 2004-10-16 公開日 2005-05-10 最終更新日 2013-03-06 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Crystal structure of a SeqA-N filament: implications for DNA replication and chromosome organization. Embo J., 24, 2005
1G51	ASPARTYL TRNA SYNTHETASE FROM THERMUS THERMOPHILUS AT 2.4 A RESOLUTION 分子名称: ADENOSINE MONOPHOSPHATE, ASPARTYL-ADENOSINE-5'-MONOPHOSPHATE, ASPARTYL-TRNA SYNTHETASE, ... 著者 Poterzsman, A, Delarue, M, Thierry, J.C, Moras, D. 登録日 2000-10-30 公開日 2000-12-06 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Synthesis and recognition of aspartyl-adenylate by Thermus thermophilus aspartyl-tRNA synthetase. J.Mol.Biol., 244, 1994
1HNL	CRYSTAL STRUCTURE OF A GLUTATHIONYLATED HUMAN LYSOZYME: A FOLDING INTERMEDIATE MIMIC IN THE FORMATION OF A DISULFIDE BOND 分子名称: GLUTATHIONE, HUMAN LYSOZYME 著者 Inaka, K, Matsushima, M, Miki, K. 登録日 1994-12-22 公開日 1995-02-14 最終更新日 2024-06-05 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Structure of a glutathionylated human lysozyme: a folding intermediate mimic in the formation of a disulfide bond. Acta Crystallogr.,Sect.D, 51, 1995
2Z4Z	S. cerevisiae geranylgeranyl pyrophosphate synthase in complex with magnesium and BPH-sc01 分子名称: (6E,11E)-HEPTADECA-6,11-DIENE-9,9-DIYLBIS(PHOSPHONIC ACID), Geranylgeranyl pyrophosphate synthetase, MAGNESIUM ION 著者 Chen, C.K.-M, Guo, R.T, Hudock, M, Cao, R, Oldfield, E, Wang, A.H.-J. 登録日 2007-06-26 公開日 2008-07-01 最終更新日 2023-11-01 実験手法 X-RAY DIFFRACTION (2.09 Å) 主引用文献 Inhibition of geranylgeranyl diphosphate synthase by bisphosphonates: a crystallographic and computational investigation J.Med.Chem., 51, 2008
1IEQ	CRYSTAL STRUCTURE OF BARLEY BETA-D-GLUCAN GLUCOHYDROLASE ISOENZYME EXO1 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-2)-alpha-D-mannopyranose-(1-6)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-3)]2-acetamido-2-deoxy-beta-D-glucopyranose, BETA-D-GLUCAN GLUCOHYDROLASE ISOENZYME EXO1, beta-D-glucopyranose, ... 著者 Hrmova, M, DeGori, R, Fincher, G.B, Varghese, J.N. 登録日 2001-04-11 公開日 2001-11-14 最終更新日 2023-08-09 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Catalytic mechanisms and reaction intermediates along the hydrolytic pathway of a plant beta-D-glucan glucohydrolase. Structure, 9, 2001
1IGO	Family 11 xylanase 分子名称: SULFATE ION, family 11 xylanase 著者 Oakley, A.J, Thomson, C, Heinrich, T, Dunlop, R, Wilce, M.C.J. 登録日 2001-04-18 公開日 2002-04-18 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Characterization of a family 11 xylanase from Bacillus subtillis B230 used for paper bleaching. Acta Crystallogr.,Sect.D, 59, 2003
1GA7	CRYSTAL STRUCTURE OF THE ADP-RIBOSE PYROPHOSPHATASE IN COMPLEX WITH GD+3 分子名称: GADOLINIUM ION, HYPOTHETICAL 23.7 KDA PROTEIN IN ICC-TOLC INTERGENIC REGION 著者 Gabelli, S.B, Bianchet, M.A, Bessman, M.J, Amzel, L.M. 登録日 2000-11-29 公開日 2001-05-02 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2.71 Å) 主引用文献 The structure of ADP-ribose pyrophosphatase reveals the structural basis for the versatility of the Nudix family. Nat.Struct.Biol., 8, 2001
1ZUX	EosFP Fluorescent Protein- Green Form 分子名称: green to red photoconvertible GPF-like protein EosFP 著者 Nar, H, Nienhaus, K, Wiedenmann, J, Nienhaus, G.U. 登録日 2005-06-01 公開日 2005-06-28 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Structural basis for photo-induced protein cleavage and green-to-red conversion of fluorescent protein EosFP. Proc.Natl.Acad.Sci.Usa, 102, 2005
1GBW	CRYSTAL STRUCTURE OF MUTANT HUMAN LYSOZYME SUBSTITUTED AT THE SURFACE POSITIONS 分子名称: LYSOZYME, SODIUM ION 著者 Funahashi, J, Takano, K, Yamagata, Y, Yutani, K. 登録日 2000-06-26 公開日 2000-07-27 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Role of surface hydrophobic residues in the conformational stability of human lysozyme at three different positions. Biochemistry, 39, 2000
4RWI	Crystal structure of V561M FGFR1 gatekeeper mutation (C488A, C584S, V561M), apo 分子名称: Fibroblast growth factor receptor 1 著者 Sohl, C.D, Anderson, K.S. 登録日 2014-12-04 公開日 2015-04-15 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.292 Å) 主引用文献 Illuminating the Molecular Mechanisms of Tyrosine Kinase Inhibitor Resistance for the FGFR1 Gatekeeper Mutation: The Achilles' Heel of Targeted Therapy. Acs Chem.Biol., 10, 2015
1ILW	Crystal Structure of Pyrazinamidase/Nicotinamidase of Pyrococcus horikoshii 分子名称: 180 aa long hypothetical Pyrazinamidase/nicotinamidase 著者 Du, X, Kim, S.-H, Berkeley Structural Genomics Center (BSGC) 登録日 2001-05-08 公開日 2001-12-12 最終更新日 2024-04-03 実験手法 X-RAY DIFFRACTION (2.05 Å) 主引用文献 Crystal structure and mechanism of catalysis of a pyrazinamidase from Pyrococcus horikoshii. Biochemistry, 40, 2001
1IMB	STRUCTURAL ANALYSIS OF INOSITOL MONOPHOSPHATASE COMPLEXES WITH SUBSTRATES 分子名称: GADOLINIUM ATOM, INOSITOL MONOPHOSPHATASE, L-MYO-INOSITOL-1-PHOSPHATE 著者 Bone, R. 登録日 1994-02-08 公開日 1995-02-27 最終更新日 2017-11-29 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Structural analysis of inositol monophosphatase complexes with substrates. Biochemistry, 33, 1994
4RPY	Human DNA Polymerase Beta With Gapped DNA Containing an 8-oxo-7,8-dihydro-Guanine(8-oxoG) and dCTP soaked with MgCl2 for 30 s 分子名称: 2'-DEOXYCYTIDINE-5'-TRIPHOSPHATE, ACETATE ION, CHLORIDE ION, ... 著者 Vyas, R, Suo, Z. 登録日 2014-10-31 公開日 2015-04-15 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Viewing Human DNA Polymerase beta Faithfully and Unfaithfully Bypass an Oxidative Lesion by Time-Dependent Crystallography. J.Am.Chem.Soc., 137, 2015
4NL5	Mycobacterium tuberculosis heme-degrading protein MhuD in complex with heme and cyanide 分子名称: ACETATE ION, CYANIDE ION, Heme-degrading monooxygenase HmoB, ... 著者 Morse, R.P, Chao, A, Goulding, C.W. 登録日 2013-11-13 公開日 2014-06-25 最終更新日 2024-02-28 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystallographic and Spectroscopic Insights into Heme Degradation by Mycobacterium tuberculosis MhuD. Inorg.Chem., 53, 2014
1GB0	CRYSTAL STRUCTURE OF MUTANT HUMAN LYSOZYME SUBSTITUTED AT THE SURFACE POSITIONS 分子名称: LYSOZYME, SODIUM ION 著者 Funahashi, J, Takano, K, Yamagata, Y, Yutani, K. 登録日 2000-06-26 公開日 2000-07-27 最終更新日 2023-11-29 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Role of surface hydrophobic residues in the conformational stability of human lysozyme at three different positions. Biochemistry, 39, 2000
4NLE	Crystal structure of apo Adenylosuccinate Lyase from Mycobacterium smegmatis 分子名称: Adenylosuccinate lyase 著者 Banerjee, S, Murthy, M.R.N. 登録日 2013-11-14 公開日 2014-03-05 最終更新日 2023-11-08 実験手法 X-RAY DIFFRACTION (2.16 Å) 主引用文献 Structural and kinetic studies on adenylosuccinate lyase from Mycobacterium smegmatis and Mycobacterium tuberculosis provide new insights on the catalytic residues of the enzyme. Febs J., 281, 2014
1GE3	CRYSTAL STRUCTURE OF MUTANT HUMAN LYSOZYME SUBSTITUTED AT LEFT-HANDED HELICAL POSITIONS 分子名称: LYSOZYME C, SODIUM ION 著者 Takano, K, Yamagata, Y, Yutani, K. 登録日 2000-10-06 公開日 2000-11-08 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Role of non-glycine residues in left-handed helical conformation for the conformational stability of human lysozyme Proteins, 44, 2001
1GEB	X-RAY CRYSTAL STRUCTURE AND CATALYTIC PROPERTIES OF THR252ILE MUTANT OF CYTOCHROME P450CAM 分子名称: CAMPHOR, CYTOCHROME P450-CAM, PROTOPORPHYRIN IX CONTAINING FE 著者 Hishiki, T, Shimada, H, Nagano, S, Park, S.-Y, Ishimura, Y. 登録日 2000-11-01 公開日 2000-11-15 最終更新日 2023-10-25 実験手法 X-RAY DIFFRACTION (2.03 Å) 主引用文献 X-ray crystal structure and catalytic properties of Thr252Ile mutant of cytochrome P450cam: roles of Thr252 and water in the active center. J.Biochem., 128, 2000
4NMO	CFTR Associated Ligand (CAL) PDZ domain bound to peptide iCAL36(Ac-K-1)(ANSRWPTS[Ac-K]I) 分子名称: GLYCEROL, Golgi-associated PDZ and coiled-coil motif-containing protein, iCAL36(Ac-K-1) peptide 著者 Amacher, J.F, Madden, D.R. 登録日 2013-11-15 公開日 2014-10-01 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 Chemically Modified Peptide Scaffolds Target the CFTR-Associated Ligand PDZ Domain. Plos One, 9, 2014
1IUU	P-HYDROXYBENZOATE HYDROXYLASE COMPLEXED WITH 4-AMINOBENZOATE AT PH 9.4 分子名称: 4-AMINOBENZOIC ACID, FLAVIN-ADENINE DINUCLEOTIDE, P-HYDROXYBENZOATE HYDROXYLASE 著者 Gatti, D.L, Entsch, B, Ballou, D.P, Ludwig, M.L. 登録日 1995-11-22 公開日 1996-04-03 最終更新日 2024-02-07 実験手法 X-RAY DIFFRACTION (2 Å) 主引用文献 pH-dependent structural changes in the active site of p-hydroxybenzoate hydroxylase point to the importance of proton and water movements during catalysis. Biochemistry, 35, 1996
1GFA	CRYSTAL STRUCTURE OF MUTANT HUMAN LYSOZYME SUBSTITUTED AT THE SURFACE POSITIONS 分子名称: LYSOZYME, SODIUM ION 著者 Funahashi, J, Takano, K, Yamagata, Y, Yutani, K. 登録日 2000-12-04 公開日 2000-12-20 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (1.8 Å) 主引用文献 Positive contribution of hydration structure on the surface of human lysozyme to the conformational stability. J.Biol.Chem., 277, 2002

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