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7L30
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Binjari virus (BinJV)
分子名称: Envelope protein E, prM protein
著者Hardy, J.M, Venugopal, H.V, Newton, N.D, Watterson, D, Coulibaly, F.J.
登録日2020-12-17
公開日2021-03-10
最終更新日2021-05-26
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献The structure of an infectious immature flavivirus redefines viral architecture and maturation.
Sci Adv, 7, 2021
7KPL
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Crystal structure of hEphB1 in apo form
分子名称: Ephrin type-B receptor 1
著者Ahmed, M, Wang, P, Sadek, H.
登録日2020-11-11
公開日2021-03-10
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.705 Å)
主引用文献Identification of tetracycline combinations as EphB1 tyrosine kinase inhibitors for treatment of neuropathic pain.
Proc.Natl.Acad.Sci.USA, 118, 2021
1OLT
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Coproporphyrinogen III oxidase (HemN) from Escherichia coli is a Radical SAM enzyme.
分子名称: IRON/SULFUR CLUSTER, OXYGEN-INDEPENDENT COPROPORPHYRINOGEN III OXIDASE, S-ADENOSYLMETHIONINE
著者Layer, G, Moser, J, Heinz, D.W, Jahn, D, Schubert, W.-D.
登録日2003-08-13
公開日2003-12-04
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Crystal Structure of Coproporphyrinogen III Oxidase Reveals Cofactor Geometry of Radical Sam Enzymes
Embo J., 22, 2003
7KIZ
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reduced human peroxiredoxin 2
分子名称: Peroxiredoxin-2
著者Kean, K.M, Karplus, P.A.
登録日2020-10-25
公開日2021-03-10
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Modifying the resolving cysteine affects the structure and hydrogen peroxide reactivity of peroxiredoxin 2.
J.Biol.Chem., 296, 2021
3ALF
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BU of 3alf by Molmil
Crystal Structure of Class V Chitinase from Nicotiana tobaccum
分子名称: 1,2-ETHANEDIOL, Chitinase, class V, ...
著者Numata, T, Osawa, T, Ohnuma, T, Fukamizo, T.
登録日2010-08-03
公開日2011-03-23
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Crystal structure and mode of action of a class V chitinase from Nicotiana tabacum
Plant Mol.Biol., 75, 2011
7QIR
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BU of 7qir by Molmil
CRYSTAL STRUCTURE OF THE P1 monofluorethylglycine(MfeGly) BPTI MUTANT- BOVINE CHYMOTRYPSIN COMPLEX
分子名称: Chymotrypsin A chain A, Chymotrypsin A chain B, Chymotrypsin A chain C, ...
著者Dimos, N, Leppkes, J, Koksch, B, Wahl, M.C, Loll, B.
登録日2021-12-15
公開日2022-03-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Fluorine-induced polarity increases inhibitory activity of BPTI towards chymotrypsin.
Rsc Chem Biol, 3, 2022
5FYI
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Crystal structure of human JMJD2A in complex with pyruvate
分子名称: (2-hydroxyethoxy)acetaldehyde, 1,2-ETHANEDIOL, DIMETHYL SULFOXIDE, ...
著者Nowak, R, Kopec, J, Johansson, C, Szykowska, A, von Delft, F, Arrowsmith, C.H, Bountra, C, Edwards, A, Oppermann, U.
登録日2016-03-07
公開日2016-03-16
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.096 Å)
主引用文献Crystal Structure of Human Jmjd2A in Complex with Pyruvate
To be Published
5C3T
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BU of 5c3t by Molmil
PD-1 binding domain from human PD-L1
分子名称: Programmed cell death 1 ligand 1
著者Zak, K.M, Dubin, G, Holak, T.A.
登録日2015-06-17
公開日2015-11-04
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of the Complex of Human Programmed Death 1, PD-1, and Its Ligand PD-L1.
Structure, 23, 2015
7KOX
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Alpha-7 nicotinic acetylcholine receptor bound to epibatidine and PNU-120596 in the activated state
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Noviello, C.M, Hibbs, R.E, Gharpure, A, Mukhtasimova, N, Baxter, L, Cabuco, R, Borek, D, Sine, S.
登録日2020-11-10
公開日2021-03-17
最終更新日2021-05-12
実験手法ELECTRON MICROSCOPY (2.7 Å)
主引用文献Structure and gating mechanism of the alpha 7 nicotinic acetylcholine receptor.
Cell, 184, 2021
5FZ6
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Crystal structure of the catalytic domain of human JARID1B in complex with Maybridge fragment N05859b (ligand modelled based on PANDDA event map, SGC - Diamond I04-1 fragment screening)
分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, 4-CARBOXYPIPERIDINE, ...
著者Nowak, R, Krojer, T, Johansson, C, Kupinska, K, Szykowska, A, Pearce, N, Talon, R, Collins, P, Gileadi, C, Strain-Damerell, C, Burgess-Brown, N.A, Arrowsmith, C.H, Bountra, C, Edwards, A.M, von Delft, F, Brennan, P.E, Oppermann, U.
登録日2016-03-11
公開日2016-03-23
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.33 Å)
主引用文献Crystal Structure of the Catalytic Domain of Human Jarid1B in Complex with Maybridge Fragment N05859B (Ligand Modelled Based on Pandda Event Map, Sgc - Diamond I04-1 Fragment Screening)
To be Published
5FY5
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Crystal structure of the catalytic domain of human JARID1B in complex with fumarate
分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, FUMARIC ACID, ...
著者Nowak, R, Srikannathasan, V, Johansson, C, Gileadi, C, Kupinska, K, Strain-Damerell, C, Szykowska, A, von Delft, F, Burgess-Brown, N.A, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Oppermann, U.
登録日2016-03-04
公開日2017-03-22
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.47 Å)
主引用文献Crystal Structure of the Catalytic Domain of Human Jarid1B in Complex with Fumarate
To be Published
4HZC
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BU of 4hzc by Molmil
Crystal structure of Serine acetyltransferase from Brucella abortus strain S19
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, CysE, ...
著者Kumar, S, Samudrala, G.
登録日2012-11-15
公開日2014-02-19
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (1.97 Å)
主引用文献Crystal structure of serine acetyl transferase from Brucella abortus and its complex with coenzyme A.
Biochim.Biophys.Acta, 1844, 2014
5FYH
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Crystal structure of human JMJD2A in complex with fumarate
分子名称: 1,2-ETHANEDIOL, FUMARIC ACID, LYSINE-SPECIFIC DEMETHYLASE 4A, ...
著者Nowak, R, Kopec, J, Johansson, C, Szykowska, A, von Delft, F, Arrowsmith, C.H, Bountra, C, Edwards, A, Oppermann, U.
登録日2016-03-07
公開日2016-03-23
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.348 Å)
主引用文献Crystal Structure of Human Jmjd2A in Complex with Fumarate
To be Published
4MPY
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BU of 4mpy by Molmil
1.85 Angstrom resolution crystal structure of betaine aldehyde dehydrogenase (betB) from Staphylococcus aureus (IDP00699) in complex with NAD+
分子名称: Betaine aldehyde dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, SODIUM ION
著者Halavaty, A.S, Minasov, G, Shuvalova, L, Winsor, J, Peterson, S.N, Anderson, W.F, Center for Structural Genomics of Infectious Diseases (CSGID)
登録日2013-09-14
公開日2013-10-09
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Structure-based mutational studies of substrate inhibition of betaine aldehyde dehydrogenase BetB from Staphylococcus aureus.
Appl.Environ.Microbiol., 80, 2014
3CZF
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BU of 3czf by Molmil
Crystal structure of HLA-B*2709 complexed with the glucagon receptor (GR) peptide (residues 412-420)
分子名称: BETA-2-MICROGLOBULIN, GLUCAGON RECEPTOR PEPTIDE, GLYCEROL, ...
著者Loll, B, Fiorillo, M.T, Rueckert, C, Saenger, W, Sorrentino, R, Ziegler, A, Uchanska-Ziegler, B.
登録日2008-04-29
公開日2009-04-07
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Conformational Plasticity of HLA-B27 Molecules Correlates Inversely With Efficiency of Negative T Cell Selection.
Front Immunol, 11, 2020
7KPM
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BU of 7kpm by Molmil
Crystal structure of hEphB1 bound with ADP
分子名称: ADENOSINE-5'-DIPHOSPHATE, Ephrin type-B receptor 1
著者Ahmed, M, Wang, P, Sadek, H.
登録日2020-11-11
公開日2021-03-10
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.608 Å)
主引用文献Identification of tetracycline combinations as EphB1 tyrosine kinase inhibitors for treatment of neuropathic pain.
Proc.Natl.Acad.Sci.USA, 118, 2021
7KUI
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BU of 7kui by Molmil
Cryo-EM structure of Rous sarcoma virus cleaved synaptic complex (CSC) with HIV-1 integrase strand transfer inhibitor MK-2048. CIC region of a cluster identified by 3-dimensional variability analysis in cryoSPARC.
分子名称: (6S)-2-(3-chloro-4-fluorobenzyl)-8-ethyl-10-hydroxy-N,6-dimethyl-1,9-dioxo-1,2,6,7,8,9-hexahydropyrazino[1',2':1,5]pyrrolo[2,3-d]pyridazine-4-carboxamide, DNA (5'-D(*AP*AP*TP*GP*TP*TP*GP*TP*CP*TP*TP*AP*TP*GP*CP*AP*AP*T)-3'), DNA (5'-D(*AP*TP*TP*GP*CP*AP*TP*AP*AP*GP*AP*CP*AP*AP*CP*A)-3'), ...
著者Pandey, K.K, Bera, S, Shi, K, Aihara, H, Grandgenett, D.P.
登録日2020-11-25
公開日2021-03-17
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Cryo-EM structure of the Rous sarcoma virus octameric cleaved synaptic complex intasome.
Commun Biol, 4, 2021
7QDV
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BU of 7qdv by Molmil
Crystal structure of outer surface protein BBA14 (OrfD) from Borrelia burgdorferi
分子名称: BBA14 (OrfD)
著者Brangulis, K.
登録日2021-11-30
公開日2022-03-09
最終更新日2024-06-19
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Structural Analysis of the Outer Membrane Lipoprotein BBA14 (OrfD) and the Corresponding Paralogous Gene Family 143 (PFam143) from Borrelia burgdorferi.
Pathogens, 11, 2022
5FYC
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BU of 5fyc by Molmil
Crystal structure of human JMJD2A in complex with succinate
分子名称: 1,2-ETHANEDIOL, FUMARIC ACID, LYSINE-SPECIFIC DEMETHYLASE 4A, ...
著者Nowak, R, Kopec, J, Johansson, C, Szykowska, A, von Delft, F, Arrowsmith, C.H, Bountra, C, Edwards, A, Oppermann, U.
登録日2016-03-07
公開日2016-03-16
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.261 Å)
主引用文献Crystal Structure of Human Jmjd2A in Complex with Succinate
To be Published
5FY4
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Crystal structure of the catalytic domain of human JARID1B in complex with succinate
分子名称: 1,2-ETHANEDIOL, FUMARIC ACID, LYSINE-SPECIFIC DEMETHYLASE 5B, ...
著者Nowak, R, Srikannathasan, V, Johansson, C, Gileadi, C, Kupinska, K, Strain-Damerell, C, Szykowska, A, von Delft, F, Burgess-Brown, N.A, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Oppermann, U.
登録日2016-03-04
公開日2017-03-22
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal Structure of the Catalytic Domain of Human Jarid1B in Complex with Succinate
To be Published
2VJJ
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BU of 2vjj by Molmil
TAILSPIKE PROTEIN OF E.COLI BACTERIOPHAGE HK620 IN COMPLEX WITH HEXASACCHARIDE
分子名称: CALCIUM ION, CHLORIDE ION, GLYCEROL, ...
著者Mueller, J.J, Barbirz, S, Uetrecht, C, Seckler, R, Heinemann, U.
登録日2007-12-11
公開日2008-07-01
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.59 Å)
主引用文献Crystal Structure of Escherichia Coli Phage Hk620 Tailspike: Podoviral Tailspike Endoglycosidase Modules are Evolutionarily Related.
Mol.Microbiol., 69, 2008
2EE4
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BU of 2ee4 by Molmil
Solution structure of the RhoGAP domain from human Rho GTPase activating protein 5 variant
分子名称: Rho GTPase activating protein 5 variant
著者Tomizawa, T, Tochio, N, Koshiba, S, Watanabe, S, Harada, T, Kigawa, T, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
登録日2007-02-15
公開日2007-08-21
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Solution structure of the RhoGAP domain from human Rho GTPase activating protein 5 variant
To be Published
5FY9
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Crystal structure of the catalytic domain of human JARID1B in complex with pyruvate
分子名称: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, LYSINE-SPECIFIC DEMETHYLASE 5B, ...
著者Nowak, R, Srikannathasan, V, Johansson, C, Gileadi, C, Kupinska, K, Strain-Damerell, C, Szykowska, A, von Delft, F, Burgess-Brown, N.A, Arrowsmith, C.H, Bountra, C, Edwards, A.M, Oppermann, U.
登録日2016-03-04
公開日2017-03-22
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Crystal Structure of the Catalytic Domain of Human Jarid1B in Complex with Pyruvate
To be Published
7KJ1
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human peroxiredoxin 2 - C172S mutant
分子名称: Peroxiredoxin-2
著者Kean, K.M, Karplus, P.A.
登録日2020-10-25
公開日2021-03-10
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Modifying the resolving cysteine affects the structure and hydrogen peroxide reactivity of peroxiredoxin 2.
J.Biol.Chem., 296, 2021
7QIS
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CRYSTAL STRUCTURE OF THE P1 difluoroethylglycine (DfeGly) BPTI MUTANT- BOVINE CHYMOTRYPSIN COMPLEX
分子名称: Chymotrypsin A chain A, Chymotrypsin A chain B, Chymotrypsin A chain C, ...
著者Dimos, N, Leppkes, J, Koksch, B, Wahl, M.C, Loll, B.
登録日2021-12-15
公開日2022-03-09
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Fluorine-induced polarity increases inhibitory activity of BPTI towards chymotrypsin.
Rsc Chem Biol, 3, 2022

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件を2024-08-14に公開中

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