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3UN7
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Crystal structure of PBPA from MYCOBACTERIUM TUBERCULOSIS
分子名称: Penicillin-binding protein A
著者Fedarovich, A, Davies, C.
登録日2011-11-15
公開日2012-10-24
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The role of the beta5-alpha11 loop in the active-site dynamics of acylated penicillin-binding protein A from Mycobacterium tuberculosis
J.Mol.Biol., 418, 2012
1A69
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PURINE NUCLEOSIDE PHOSPHORYLASE IN COMPLEX WITH FORMYCIN B AND SULPHATE (PHOSPHATE)
分子名称: FORMYCIN B, PURINE NUCLEOSIDE PHOSPHORYLASE, SULFATE ION
著者Koellner, G, Luic, M, Shugar, D, Saenger, W, Bzowska, A.
登録日1998-03-08
公開日1998-10-14
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of the ternary complex of E. coli purine nucleoside phosphorylase with formycin B, a structural analogue of the substrate inosine, and phosphate (Sulphate) at 2.1 A resolution.
J.Mol.Biol., 280, 1998
3H0G
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BU of 3h0g by Molmil
RNA Polymerase II from Schizosaccharomyces pombe
分子名称: DNA-directed RNA polymerase II subunit RPB11, DNA-directed RNA polymerase II subunit RPB2, DNA-directed RNA polymerase II subunit RPB3, ...
著者Spahr, H, Calero, G, Bushnell, D.A, Kornberg, R.D.
登録日2009-04-09
公開日2009-08-25
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (3.65 Å)
主引用文献Schizosacharomyces pombe RNA polymerase II at 3.6-A resolution.
Proc.Natl.Acad.Sci.USA, 106, 2009
8DW8
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BU of 8dw8 by Molmil
Host-guest structure of BLMA2 partially bound to 5'-ATTAGTTATAACTAAT-3'
分子名称: BLEOMYCIN A2, DNA (5'-D(*AP*TP*TP*AP*GP*TP*TP*A)-3'), DNA (5'-D(P*TP*AP*AP*CP*TP*AP*AP*T)-3'), ...
著者Georgiadis, M.M.
登録日2022-07-31
公開日2023-01-11
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.58 Å)
主引用文献Two distinct rotations of bithiazole DNA intercalation revealed by direct comparison of crystal structures of Co(III)•bleomycin A 2 and B 2 bound to duplex 5'-TAGTT sites.
Bioorg.Med.Chem., 77, 2023
7PIB
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BU of 7pib by Molmil
70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
分子名称: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
著者Xue, L, Lenz, S, Rappsilber, J, Mahamid, J.
登録日2021-08-19
公開日2022-05-25
最終更新日2022-10-19
実験手法ELECTRON MICROSCOPY (4.7 Å)
主引用文献Visualizing translation dynamics at atomic detail inside a bacterial cell.
Nature, 610, 2022
6JW8
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The crystal structure of KanD2 in complex with NADH and 3"-deamino-3"-hydroxykanamycin B
分子名称: (2S,3R,4S,5S,6R)-2-[(1S,2S,3R,4S,6R)-3-[(2R,3R,4R,5S,6R)-6-(aminomethyl)-3-azanyl-4,5-bis(oxidanyl)oxan-2-yl]oxy-4,6-bis(azanyl)-2-oxidanyl-cyclohexyl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol, 1,4-DIHYDRONICOTINAMIDE ADENINE DINUCLEOTIDE, Dehydrogenase
著者Kudo, F, Kitayama, Y, Miyanaga, A, Hirayama, A, Eguchi, T.
登録日2019-04-18
公開日2020-04-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Biochemical and structural analysis of a dehydrogenase, KanD2, and an aminotransferase, KanS2, that are responsible for the construction of the kanosamine moiety in kanamycin biosynthesis.
Biochemistry, 59, 2020
7F0B
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BU of 7f0b by Molmil
Crystal structure of capreomycin phosphotransferase in complex with ATP
分子名称: ADENOSINE-5'-TRIPHOSPHATE, Capreomycin phosphotransferase
著者Chang, C.Y, Pan, Y.C, Wang, Y.L, Toh, S.I.
登録日2021-06-03
公開日2022-05-11
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.14 Å)
主引用文献Dual-Mechanism Confers Self-Resistance to the Antituberculosis Antibiotic Capreomycin.
Acs Chem.Biol., 17, 2022
5UUG
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Bacillus cereus DNA glycosylase AlkD bound to a yatakemycin-adenine nucleobase adduct and DNA containing an abasic site (9-mer product complex)
分子名称: CALCIUM ION, DNA (5'-D(*AP*GP*GP*CP*AP*(ORP)P*AP*GP*C)-3'), DNA (5'-D(*TP*GP*CP*TP*TP*TP*GP*CP*C)-3'), ...
著者Mullins, E.A, Eichman, B.F.
登録日2017-02-16
公開日2017-07-19
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.712 Å)
主引用文献Toxicity and repair of DNA adducts produced by the natural product yatakemycin.
Nat. Chem. Biol., 13, 2017
5V3D
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Crystal structure of fosfomycin resistance protein from Klebsiella pneumoniae with bound fosfomycin
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, FOSFOMYCIN, ...
著者Klontz, E, Guenther, S, Silverstein, Z, Sundberg, E.
登録日2017-03-07
公開日2017-08-30
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.539 Å)
主引用文献Structure and Dynamics of FosA-Mediated Fosfomycin Resistance in Klebsiella pneumoniae and Escherichia coli.
Antimicrob. Agents Chemother., 61, 2017
5O0Z
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Structure of laspartomycin C in complex with geranyl-phosphate
分子名称: ACETIC ACID, CALCIUM ION, CHLORIDE ION, ...
著者Vlieg, H.C, Kleijn, L.H.J, Martin, N.I, Janssen, B.J.C.
登録日2017-05-17
公開日2017-11-15
最終更新日2024-08-07
実験手法X-RAY DIFFRACTION (1.28 Å)
主引用文献A High-Resolution Crystal Structure that Reveals Molecular Details of Target Recognition by the Calcium-Dependent Lipopeptide Antibiotic Laspartomycin C.
Angew. Chem. Int. Ed. Engl., 56, 2017
5UUF
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BU of 5uuf by Molmil
Bacillus cereus DNA glycosylase AlkD bound to a yatakemycin-adenine nucleobase adduct and DNA containing an abasic site (12-mer product complex)
分子名称: DNA (5'-D(*CP*CP*CP*CP*AP*(ORP)P*AP*GP*CP*CP*CP*G)-3'), DNA (5'-D(*CP*GP*GP*GP*CP*TP*TP*TP*GP*GP*GP*G)-3'), DNA-7-methylguanine glycosylase, ...
著者Mullins, E.A, Eichman, B.F.
登録日2017-02-16
公開日2017-07-19
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.612 Å)
主引用文献Toxicity and repair of DNA adducts produced by the natural product yatakemycin.
Nat. Chem. Biol., 13, 2017
5UUH
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BU of 5uuh by Molmil
Bacillus cereus DNA glycosylase AlkD bound to a yatakemycin-adenine nucleobase adduct and DNA containing a fluorinated abasic site (9-mer product complex)
分子名称: CALCIUM ION, DNA (5'-D(*AP*GP*GP*CP*AP*(ORF)P*AP*GP*C)-3'), DNA (5'-D(*TP*GP*CP*TP*TP*TP*GP*CP*C)-3'), ...
著者Mullins, E.A, Eichman, B.F.
登録日2017-02-16
公開日2017-07-19
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.569 Å)
主引用文献Toxicity and repair of DNA adducts produced by the natural product yatakemycin.
Nat. Chem. Biol., 13, 2017
5MQ6
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BU of 5mq6 by Molmil
Polycyclic Ketone Monooxygenase from the Thermophilic Fungus Thermothelomyces thermophila
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, GLYCEROL, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
著者Savino, S, Furst, M.J.L.J, Fraaije, M.W, Mattevi, A.
登録日2016-12-20
公開日2017-01-11
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Polycyclic Ketone Monooxygenase from the Thermophilic Fungus Thermothelomyces thermophila: A Structurally Distinct Biocatalyst for Bulky Substrates.
J. Am. Chem. Soc., 139, 2017
4XNG
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BU of 4xng by Molmil
Central Domain of Mycoplasma Genitalium Terminal Organelle protein MG491
分子名称: Uncharacterized protein MG218.1
著者Martinelli, L, Fita, I.
登録日2015-01-15
公開日2016-03-30
最終更新日2016-04-27
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Structure-Guided Mutations in the Terminal Organelle Protein MG491 Cause Major Motility and Morphologic Alterations on Mycoplasma genitalium.
Plos Pathog., 12, 2016
4OI3
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BU of 4oi3 by Molmil
Crystal structure analysis of SCO4226 from Streptomyces coelicolor A3(2)
分子名称: Nickel responsive protein
著者Lu, M, Jiang, Y.L, Wang, S, Cheng, W, Zhang, R.G, Virolle, M.J, Chen, Y, Zhou, C.Z.
登録日2014-01-18
公開日2014-09-17
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Streptomyces coelicolor SCO4226 Is a Nickel Binding Protein.
Plos One, 9, 2014
1UP3
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Structure of the endoglucanase Cel6 from Mycobacterium tuberculosis in complex with METHYL-CELLOBIOSYL-4-DEOXY-4-THIO-BETA-D-CELLOBIOSIDE at 1.6 angstrom
分子名称: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, PUTATIVE CELLULASE CEL6, SULFATE ION, ...
著者Varrot, A, Leydier, S, Pell, G, Gilbert, H.J, Davies, G.J.
登録日2003-09-26
公開日2004-11-18
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Mycobacterium Tuberculosis Strains Possess Functional Cellulases.
J.Biol.Chem., 280, 2005
1UOZ
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Structure of the endoglucanase Cel6 from Mycobacterium tuberculosis in complex with thiocellopentaose at 1.1 angstrom
分子名称: 4-thio-beta-D-glucopyranose, GLYCEROL, PUTATIVE CELLULASE, ...
著者Varrot, A, Leydier, S, Pell, G, Gilbert, H.J, Davies, G.J.
登録日2003-09-26
公開日2004-11-18
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献Mycobacterium Tuberculosis Strains Possess Functional Cellulases.
J.Biol.Chem., 280, 2005
6I5S
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BU of 6i5s by Molmil
AH, Bottromycin amidohydrolase
分子名称: CHLORIDE ION, GLYCEROL, ZINC ION, ...
著者Koehnke, J, Sikandar, A.
登録日2018-11-14
公開日2019-09-25
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Thiazoline-Specific Amidohydrolase PurAH Is the Gatekeeper of Bottromycin Biosynthesis.
J.Am.Chem.Soc., 141, 2019
4X9M
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BU of 4x9m by Molmil
Oxidized L-alpha-Glycerophosphate Oxidase from Mycoplasma pneumoniae with FAD bound
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, L-alpha-glycerophosphate oxidase, NICKEL (II) ION, ...
著者Elkhal, C.K, Kean, K.M, Parsonage, D, Claiborne, A, Karplus, P.A.
登録日2014-12-11
公開日2015-03-04
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structure and proposed mechanism of l-alpha-glycerophosphate oxidase from Mycoplasma pneumoniae.
Febs J., 282, 2015
4X9N
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BU of 4x9n by Molmil
Dithionite reduced L-alpha-Glycerophosphate Oxidase from Mycoplasma pneumoniae with FAD bound
分子名称: FLAVIN-ADENINE DINUCLEOTIDE, L-alpha-glycerophosphate oxidase, NICKEL (II) ION
著者Elkhal, C.K, Kean, K.M, Parsonage, D, Claiborne, A, Karplus, P.A.
登録日2014-12-11
公開日2015-03-04
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.499 Å)
主引用文献Structure and proposed mechanism of l-alpha-glycerophosphate oxidase from Mycoplasma pneumoniae.
Febs J., 282, 2015
6J36
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BU of 6j36 by Molmil
crystal structure of Mycoplasma hyopneumoniae Enolase
分子名称: Enolase, GLYCEROL, SULFATE ION
著者Chen, R, Zhang, S, Gan, R, Xie, X, Feng, Z, Wang, W, Ran, T, Zhang, W, Xiang, Q, Shao, G.
登録日2019-01-04
公開日2019-05-15
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.301 Å)
主引用文献Featured Species-Specific Loops Are Found in the Crystal Structure ofMhpEno, a Cell Surface Adhesin FromMycoplasma hyopneumoniae.
Front Cell Infect Microbiol, 9, 2019
1UP0
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Structure of the endoglucanase Cel6 from Mycobacterium tuberculosis in complex with cellobiose at 1.75 angstrom
分子名称: 2-(2-{2-[2-(2-METHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHANOL, ACETATE ION, PUTATIVE CELLULASE CEL6, ...
著者Varrot, A, Leydier, S, Pell, G, Gilbert, H.J, Davies, G.J.
登録日2003-09-26
公開日2004-11-18
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Mycobacterium Tuberculosis Strains Possess Functional Cellulases.
J.Biol.Chem., 280, 2005
6J6F
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Ligand binding domain 1 and 2 of Talaromyces marneffei Mp1 protein
分子名称: Envelope glycoprotein, NICKEL (II) ION
著者Lam, W.H, Zhang, H, Hao, Q.
登録日2019-01-15
公開日2019-03-06
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (4.2 Å)
主引用文献Talaromyces marneffeiMp1 Protein, a Novel Virulence Factor, Carries Two Arachidonic Acid-Binding Domains To Suppress Inflammatory Responses in Hosts.
Infect. Immun., 87, 2019
4OI6
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Crystal structure analysis of nickel-bound form SCO4226 from Streptomyces coelicolor A3(2)
分子名称: CITRIC ACID, NICKEL (II) ION, Nickel responsive protein
著者Lu, M, Jiang, Y.L, Wang, S, Cheng, W, Zhang, R.G, Virolle, M.J, Chen, Y, Zhou, C.Z.
登録日2014-01-18
公開日2014-09-10
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Streptomyces coelicolor SCO4226 Is a Nickel Binding Protein.
Plos One, 9, 2014
7VO0
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Streptomyces coelicolor zinc uptake regulator complexed with zinc and DNA (trimer of dimers)
分子名称: DNA_NT (84-MER), DNA_T (84-MER), Putative metal uptake regulation protein, ...
著者Yang, X, Zheng, J.
登録日2021-10-12
公開日2022-08-03
最終更新日2024-06-19
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Structural basis of Streptomyces transcription activation by zinc uptake regulator.
Nucleic Acids Res., 50, 2022

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