Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

7NVY
DownloadVisualize
BU of 7nvy by Molmil
RNA polymerase II pre-initiation complex with closed promoter DNA in proximal position
分子名称: CDK-activating kinase assembly factor MAT1, DNA-directed RNA polymerase II subunit E, DNA-directed RNA polymerase II subunit F, ...
著者Aibara, S, Schilbach, S, Cramer, P.
登録日2021-03-16
公開日2021-05-05
最終更新日2024-07-10
実験手法ELECTRON MICROSCOPY (7.3 Å)
主引用文献Structures of mammalian RNA polymerase II pre-initiation complexes.
Nature, 594, 2021
7O1P
DownloadVisualize
BU of 7o1p by Molmil
[FeFe]-hydrogenase maturase HydE from T. Maritima (C-ter stretch absent)
分子名称: 3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE, CARBONATE ION, CHLORIDE ION, ...
著者Rohac, R, Martin, L, Liu, L, Basu, D, Tao, L, Britt, R.D, Rauchfuss, T, Nicolet, Y.
登録日2021-03-30
公開日2021-05-26
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.58 Å)
主引用文献Crystal Structure of the [FeFe]-Hydrogenase Maturase HydE Bound to Complex-B.
J.Am.Chem.Soc., 143, 2021
7NSI
DownloadVisualize
BU of 7nsi by Molmil
55S mammalian mitochondrial ribosome with mtRRF (pre) and tRNA(P/E)
分子名称: 12S rRNA, 16S rRNA, 28S ribosomal protein S10, ...
著者Kummer, E, Schubert, K, Ban, N.
登録日2021-03-07
公開日2021-06-02
最終更新日2024-11-06
実験手法ELECTRON MICROSCOPY (4.6 Å)
主引用文献Structural basis of translation termination, rescue, and recycling in mammalian mitochondria.
Mol.Cell, 81, 2021
7NS9
DownloadVisualize
BU of 7ns9 by Molmil
Triphosphate tunnel metalloenzyme from Sulfolobus acidocaldarius in complex with triphosphate and calcium
分子名称: ACETATE ION, CALCIUM ION, DI(HYDROXYETHYL)ETHER, ...
著者Vogt, M.S, Essen, L.-O, Banerjee, A.
登録日2021-03-05
公開日2021-06-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献The archaeal triphosphate tunnel metalloenzyme SaTTM defines structural determinants for the diverse activities in the CYTH protein family.
J.Biol.Chem., 297, 2021
7NSD
DownloadVisualize
BU of 7nsd by Molmil
Triphosphate tunnel metalloenzyme from Sulfolobus acidocaldarius in complex with ATP and calcium
分子名称: ACETATE ION, ADENOSINE-5'-TRIPHOSPHATE, CALCIUM ION, ...
著者Vogt, M.S, Essen, L.-O, Banerjee, A.
登録日2021-03-05
公開日2021-06-02
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献The archaeal triphosphate tunnel metalloenzyme SaTTM defines structural determinants for the diverse activities in the CYTH protein family.
J.Biol.Chem., 297, 2021
7N5U
DownloadVisualize
BU of 7n5u by Molmil
ZBTB7A Zinc Finger Domain Bound to DNA Duplex Containing GGACCC (Oligo 21)
分子名称: DNA Strain II, DNA Strand I, ZINC ION, ...
著者Horton, J.R, Ren, R, Cheng, X.
登録日2021-06-06
公開日2022-06-08
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.86 Å)
主引用文献Structural basis for transcription factor ZBTB7A recognition of DNA and effects of ZBTB7A somatic mutations that occur in human acute myeloid leukemia.
J.Biol.Chem., 299, 2023
7N5W
DownloadVisualize
BU of 7n5w by Molmil
ZBTB7A Zinc Finger Domain Bound to DNA Duplex Containing GGACCC (Oligo 23)
分子名称: 1,2-ETHANEDIOL, DNA Strand I, DNA Strand II, ...
著者Horton, J.R, Ren, R, Cheng, X.
登録日2021-06-06
公開日2022-06-08
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.24 Å)
主引用文献Structural basis for transcription factor ZBTB7A recognition of DNA and effects of ZBTB7A somatic mutations that occur in human acute myeloid leukemia.
J.Biol.Chem., 299, 2023
7N5V
DownloadVisualize
BU of 7n5v by Molmil
ZBTB7A Zinc Finger Domain Bound to DNA Duplex Containing GGACCC (Oligo 20)
分子名称: DNA Strand I, DNA Strand II, ZINC ION, ...
著者Horton, J.R, Ren, R, Cheng, X.
登録日2021-06-06
公開日2022-06-08
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.08 Å)
主引用文献Structural basis for transcription factor ZBTB7A recognition of DNA and effects of ZBTB7A somatic mutations that occur in human acute myeloid leukemia.
J.Biol.Chem., 299, 2023
7MVX
DownloadVisualize
BU of 7mvx by Molmil
Crystal structure of the Chaetomium thermophilum Nup188-Nic96 complex (Nup188 residues 1-1858; Nic96 residues 240-301)
分子名称: Nucleoporin NIC96, Nucleoporin NUP188
著者Petrovic, S, Samanta, D, Perriches, T, Bley, C.J, Thierbach, K, Brown, B, Nie, S, Mobbs, G.W, Stevens, T.A, Liu, X, Tomaleri, G.P, Schaus, L, Hoelz, A.
登録日2021-05-15
公開日2022-06-15
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (4.35 Å)
主引用文献Architecture of the linker-scaffold in the nuclear pore.
Science, 376, 2022
3CK9
DownloadVisualize
BU of 3ck9 by Molmil
B. thetaiotaomicron SusD with maltoheptaose
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, SusD, ...
著者Koropatkin, N.M, Martens, E.C, Gordon, J.I, Smith, T.J.
登録日2008-03-14
公開日2008-05-20
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Starch catabolism by a prominent human gut symbiont is directed by the recognition of amylose helices.
Structure, 16, 2008
7MVW
DownloadVisualize
BU of 7mvw by Molmil
Crystal structure of Chaetomium thermophilum Nup188 NTD (residues 1-1134)
分子名称: GLYCEROL, Nucleoporin NUP188
著者Petrovic, S, Samanta, D, Perriches, T, Bley, C.J, Thierbach, K, Brown, B, Nie, S, Mobbs, G.W, Stevens, T.A, Liu, X, Tomaleri, G.P, Schaus, L, Hoelz, A.
登録日2021-05-15
公開日2022-06-15
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (2.76 Å)
主引用文献Architecture of the linker-scaffold in the nuclear pore.
Science, 376, 2022
7MVT
DownloadVisualize
BU of 7mvt by Molmil
Crystal structure of the Chaetomium thermophilum Nup192-Nic96 complex (Nup192 residues 185-1756; Nic96 residues 187-301)
分子名称: Nucleoporin NIC96, Nucleoporin NUP192
著者Petrovic, S, Samanta, D, Perriches, T, Bley, C.J, Thierbach, K, Brown, B, Nie, S, Mobbs, G.W, Stevens, T.A, Liu, X, Tomaleri, G.P, Schaus, L, Hoelz, A.
登録日2021-05-15
公開日2022-06-15
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Architecture of the linker-scaffold in the nuclear pore.
Science, 376, 2022
7MVV
DownloadVisualize
BU of 7mvv by Molmil
Single particle cryo-EM structure of the Chaetomium thermophilum Nup192-Nic96-Nup53-Nup145N complex (Nup192 residues 1-1756; Nic96 residues 240-301; Nup53 31-67; Nup145N 616-683)
分子名称: Nucleoporin NIC96, Nucleoporin NUP145N, Nucleoporin NUP192, ...
著者Petrovic, S, Samanta, D, Perriches, T, Bley, C.J, Thierbach, K, Brown, B, Nie, S, Mobbs, G.W, Stevens, T.A, Liu, X, Tomaleri, G.P, Schaus, L, Hoelz, A.
登録日2021-05-15
公開日2022-06-15
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.22 Å)
主引用文献Architecture of the linker-scaffold in the nuclear pore.
Science, 376, 2022
7N4F
DownloadVisualize
BU of 7n4f by Molmil
Ni-bound crystal structure of the engineered cyt cb562 variant, AB2-H100A, crystallized in the presence of Ni(II)
分子名称: HEME C, NICKEL (II) ION, Soluble cytochrome b562
著者Choi, T.S, Tezcan, F.A.
登録日2021-06-04
公開日2022-06-15
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Overcoming universal restrictions on metal selectivity by protein design.
Nature, 603, 2022
7N4G
DownloadVisualize
BU of 7n4g by Molmil
Co-bound crystal structure of the engineered cyt cb562 variant, AB2-H100A, crystallized in the presence of Co(II)
分子名称: COBALT (II) ION, HEME C, Soluble cytochrome b562
著者Choi, T.S, Tezcan, F.A.
登録日2021-06-04
公開日2022-06-15
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献Overcoming universal restrictions on metal selectivity by protein design.
Nature, 603, 2022
7N4P
DownloadVisualize
BU of 7n4p by Molmil
Crystal Structure of Lizard Cadherin-23 EC1-2
分子名称: CALCIUM ION, Cadherin 23, SODIUM ION
著者Nisler, C.R, Sotomayor, M.
登録日2021-06-04
公開日2022-06-15
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.097 Å)
主引用文献Interpreting the Evolutionary Echoes of a Protein Complex Essential for Inner-Ear Mechanosensation.
Mol.Biol.Evol., 40, 2023
7MVZ
DownloadVisualize
BU of 7mvz by Molmil
Single particle cryo-EM structure of the Chaetomium thermophilum Nup188-Nic96-Nup145N complex (Nup188 residues 1-1858; Nic96 residues 240-301; Nup145N residues 640-732)
分子名称: Nucleoporin NIC96, Nucleoporin NUP145N, Nucleoporin NUP188
著者Petrovic, S, Samanta, D, Perriches, T, Bley, C.J, Thierbach, K, Brown, B, Nie, S, Mobbs, G.W, Stevens, T.A, Liu, X, Tomaleri, G.P, Schaus, L, Hoelz, A.
登録日2021-05-15
公開日2022-06-15
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.81 Å)
主引用文献Architecture of the linker-scaffold in the nuclear pore.
Science, 376, 2022
7MW1
DownloadVisualize
BU of 7mw1 by Molmil
Crystal structure of the Homo sapiens NUP93-NUP53 complex (NUP93 residues 174-819; NUP53 residues 84-150)
分子名称: Nuclear pore complex protein Nup93, Nucleoporin Nup35
著者Petrovic, S, Samanta, D, Perriches, T, Bley, C.J, Thierbach, K, Brown, B, Nie, S, Mobbs, G.W, Stevens, T.A, Liu, X, Tomaleri, G.P, Schaus, L, Hoelz, A.
登録日2021-05-15
公開日2022-06-15
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Architecture of the linker-scaffold in the nuclear pore.
Science, 376, 2022
7N4E
DownloadVisualize
BU of 7n4e by Molmil
Escherichia coli sigma 70-dependent paused transcription elongation complex
分子名称: 5'-R(*UP*UP*CP*GP*GP*AP*GP*AP*GP*GP*UP*A)-3', DNA (61-MER), DNA-directed RNA polymerase subunit alpha, ...
著者Molodtsov, V, Su, M, Ebright, R.H.
登録日2021-06-04
公開日2022-06-15
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structural and mechanistic basis of sigma-dependent transcriptional pausing.
Proc.Natl.Acad.Sci.USA, 119, 2022
7MVY
DownloadVisualize
BU of 7mvy by Molmil
Single particle cryo-EM structure of the Chaetomium thermophilum Nup188-Nic96 complex (Nup188 residues 1-1858; Nic96 residues 240-301)
分子名称: Nucleoporin NIC96, Nucleoporin NUP188
著者Petrovic, S, Samanta, D, Perriches, T, Bley, C.J, Thierbach, K, Brown, B, Nie, S, Mobbs, G.W, Stevens, T.A, Liu, X, Tomaleri, G.P, Schaus, L, Hoelz, A.
登録日2021-05-15
公開日2022-06-15
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (2.39 Å)
主引用文献Architecture of the linker-scaffold in the nuclear pore.
Science, 376, 2022
7MVU
DownloadVisualize
BU of 7mvu by Molmil
Single particle cryo-EM structure of the Chaetomium thermophilum Nup192-Nic96 complex (Nup192 residues 1-1756; Nic96 residues 240-301)
分子名称: Nucleoporin NIC96, Nucleoporin NUP192
著者Petrovic, S, Samanta, D, Perriches, T, Bley, C.J, Thierbach, K, Brown, B, Nie, S, Mobbs, G.W, Stevens, T.A, Liu, X, Tomaleri, G.P, Schaus, L, Hoelz, A.
登録日2021-05-15
公開日2022-06-15
最終更新日2024-05-29
実験手法ELECTRON MICROSCOPY (3.77 Å)
主引用文献Architecture of the linker-scaffold in the nuclear pore.
Science, 376, 2022
7N8U
DownloadVisualize
BU of 7n8u by Molmil
Crystal structure of Triosephosphate isomerase from Candidatus Prometheoarchaeum syntrophicum
分子名称: Triosephosphate isomerase
著者Vickers, C.J, Patrick, W.M, Fraga, D.
登録日2021-06-15
公開日2022-06-15
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献Structure of PsyTPI - Candidatus Prometheoarchaeum syntrophicum triosephosphate isomerase.
To Be Published
7N6A
DownloadVisualize
BU of 7n6a by Molmil
Pre-fusion state 1 of EEEV with localized reconstruction
分子名称: Spike glycoprotein E1, Spike glycoprotein E2
著者Chen, C.-L, Kuhn, R.J, Klose, T.
登録日2021-06-07
公開日2022-06-22
最終更新日2024-10-30
実験手法ELECTRON MICROSCOPY (14.3 Å)
主引用文献Cryo-EM structures of alphavirus conformational intermediates in low pH-triggered prefusion states.
Proc.Natl.Acad.Sci.USA, 119, 2022
3D11
DownloadVisualize
BU of 3d11 by Molmil
Crystal Structures of the Nipah G Attachment Glycoprotein
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Hemagglutinin-neuraminidase, ...
著者Xu, K, Rajashankar, K.R, Chan, Y.P, Himanen, P, Broder, C.C, Nikolov, D.B.
登録日2008-05-02
公開日2008-08-19
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.306 Å)
主引用文献Host cell recognition by the henipaviruses: crystal structures of the Nipah G attachment glycoprotein and its complex with ephrin-B3.
Proc.Natl.Acad.Sci.USA, 105, 2008
7MW0
DownloadVisualize
BU of 7mw0 by Molmil
Crystal structure of Homo sapiens NUP93 solenoid (residues 174-819)
分子名称: 1,2-ETHANEDIOL, Nuclear pore complex protein Nup93
著者Petrovic, S, Samanta, D, Perriches, T, Bley, C.J, Thierbach, K, Brown, B, Nie, S, Mobbs, G.W, Stevens, T.A, Liu, X, Tomaleri, G.P, Schaus, L, Hoelz, A.
登録日2021-05-15
公開日2022-06-15
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Architecture of the linker-scaffold in the nuclear pore.
Science, 376, 2022

238582

件を2025-07-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon