Loading
PDBj
メニューPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

1TA4
DownloadVisualize
BU of 1ta4 by Molmil
Crystal Structure Of Aspartate-Semialdehyde Dehydrogenase From Haemophilus Influenzae with a Bound Arsenate
分子名称: ARSENATE, Aspartate-semialdehyde dehydrogenase
著者Viola, R.E.
登録日2004-05-19
公開日2004-12-07
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Structural basis for discrimination between oxyanion substrates or inhibitors in aspartate-beta-semialdehyde dehydrogenase.
Acta Crystallogr.,Sect.D, 60, 2004
3T8J
DownloadVisualize
BU of 3t8j by Molmil
Structural analysis of thermostable S. solfataricus pyrimidine-specific nucleoside hydrolase
分子名称: Purine nucleosidase, (IunH-1), SODIUM ION
著者Minici, C, Cacciapuoti, G, De Leo, E, Porcelli, M, Degano, M.
登録日2011-08-01
公開日2012-05-16
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献New Determinants in the Catalytic Mechanism of Nucleoside Hydrolases from the Structures of Two Isozymes from Sulfolobus solfataricus.
Biochemistry, 51, 2012
3UU6
DownloadVisualize
BU of 3uu6 by Molmil
The GLIC pentameric Ligand-Gated Ion Channel Loop2-22' mutant reduced in solution
分子名称: CHLORIDE ION, DIUNDECYL PHOSPHATIDYL CHOLINE, DODECYL-BETA-D-MALTOSIDE, ...
著者Sauguet, L, Nury, H, Corringer, P.J, Delarue, M.
登録日2011-11-28
公開日2012-05-16
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.98 Å)
主引用文献A locally closed conformation of a bacterial pentameric proton-gated ion channel.
Nat.Struct.Mol.Biol., 19, 2012
1TDY
DownloadVisualize
BU of 1tdy by Molmil
DISSECTION OF THE FUNCTIONAL ROLE OF STRUCTURAL ELEMENTS OF TYROSINE-63 IN THE CATALYTIC ACTION OF HUMAN LYSOZYME
分子名称: HUMAN LYSOZYME
著者Harata, K, Muraki, M, Jigami, Y.
登録日1992-08-06
公開日1993-01-15
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Dissection of the functional role of structural elements of tyrosine-63 in the catalytic action of human lysozyme.
Biochemistry, 31, 1992
3V3L
DownloadVisualize
BU of 3v3l by Molmil
Crystal structure of human RNF146 WWE domain in complex with iso-ADPRibose
分子名称: 2'-O-(5-O-phosphono-alpha-D-ribofuranosyl)adenosine 5'-(dihydrogen phosphate), E3 ubiquitin-protein ligase RNF146
著者Wang, Z, Cheng, Z, Xu, W.
登録日2011-12-13
公開日2012-02-15
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Recognition of the iso-ADP-ribose moiety in poly(ADP-ribose) by WWE domains suggests a general mechanism for poly(ADP-ribosyl)ation-dependent ubiquitination.
Genes Dev., 26, 2012
4HZM
DownloadVisualize
BU of 4hzm by Molmil
Crystal structure of Salmonella typhimurium family 3 glycoside hydrolase (NagZ) bound to N-[(3S,4R,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)piperidin-3-yl]butanamide
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Beta-hexosaminidase, N-[(3S,4R,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)piperidin-3-yl]butanamide
著者Bacik, J.P, Mark, B.L.
登録日2012-11-15
公開日2013-06-19
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.45 Å)
主引用文献The Development of Selective Inhibitors of NagZ: Increased Susceptibility of Gram-Negative Bacteria to beta-Lactams.
Chembiochem, 14, 2013
3CXF
DownloadVisualize
BU of 3cxf by Molmil
Crystal structure of transthyretin variant Y114H
分子名称: Transthyretin
著者Cendron, L, Zanotti, G, Folli, C, Alfieri, B, Pasquato, N, Berni, R.
登録日2008-04-24
公開日2009-04-07
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structural and mutational analyses of protein-protein interactions between transthyretin and retinol-binding protein.
Febs J., 275, 2008
3OA5
DownloadVisualize
BU of 3oa5 by Molmil
The structure of chi1, a chitinase from Yersinia entomophaga
分子名称: Chi1, GLYCEROL, NONAETHYLENE GLYCOL
著者Busby, J.N, Lott, J.S, Hurst, M.R.H.
登録日2010-08-04
公開日2011-08-10
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Structural analysis of Chi1 Chitinase from Yen-Tc: the multisubunit insecticidal ABC toxin complex of Yersinia entomophaga
J.Mol.Biol., 415, 2012
3OE9
DownloadVisualize
BU of 3oe9 by Molmil
Crystal structure of the chemokine CXCR4 receptor in complex with a small molecule antagonist IT1t in P1 spacegroup
分子名称: (6,6-dimethyl-5,6-dihydroimidazo[2,1-b][1,3]thiazol-3-yl)methyl N,N'-dicyclohexylimidothiocarbamate, C-X-C chemokine receptor type 4, Lysozyme Chimera
著者Wu, B, Mol, C.D, Han, G.W, Katritch, V, Chien, E.Y.T, Liu, W, Cherezov, V, Stevens, R.C, Accelerated Technologies Center for Gene to 3D Structure (ATCG3D), GPCR Network (GPCR)
登録日2010-08-12
公開日2010-10-27
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structures of the CXCR4 chemokine GPCR with small-molecule and cyclic peptide antagonists.
Science, 330, 2010
1TKK
DownloadVisualize
BU of 1tkk by Molmil
The Structure of a Substrate-Liganded Complex of the L-Ala-D/L-Glu Epimerase from Bacillus subtilis
分子名称: ALANINE, GLUTAMIC ACID, MAGNESIUM ION, ...
著者Klenchin, V.A, Schmidt, D.M, Gerlt, J.A, Rayment, I.
登録日2004-06-08
公開日2004-08-31
最終更新日2023-08-23
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Evolution of Enzymatic Activities in the Enolase Superfamily: Structure of a Substrate-Liganded Complex of the l-Ala-d/l-Glu Epimerase from Bacillus subtilis(,).
Biochemistry, 43, 2004
4I5F
DownloadVisualize
BU of 4i5f by Molmil
Crystal structure of Ralstonia sp. alcohol dehydrogenase mutant N15G, G37D, R38V, R39S
分子名称: Alclohol dehydrogenase/short-chain dehydrogenase
著者Jarasch, A, Lerchner, A, Meining, W, Schiefner, A, Skerra, A.
登録日2012-11-28
公開日2013-06-12
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystallographic analysis and structure-guided engineering of NADPH-dependent Ralstonia sp. Alcohol dehydrogenase toward NADH cosubstrate specificity.
Biotechnol.Bioeng., 110, 2013
8XOU
DownloadVisualize
BU of 8xou by Molmil
Prohead portal vertex of bacteriophage lambda
分子名称: Major capsid protein, Portal protein B
著者Wang, J.W, Gu, Z.W.
登録日2024-01-02
公開日2024-04-10
最終更新日2024-11-27
実験手法ELECTRON MICROSCOPY (5.58 Å)
主引用文献Structural morphing in the viral portal vertex of bacteriophage lambda.
J.Virol., 98, 2024
3TH7
DownloadVisualize
BU of 3th7 by Molmil
Crystal structure of unliganded Co2+2-HAI (pH 7.0)
分子名称: Arginase-1, COBALT (II) ION
著者D'Antonio, E.L, Christianson, D.W.
登録日2011-08-18
公開日2011-09-14
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structures of complexes with cobalt-reconstituted human arginase I.
Biochemistry, 50, 2011
1B7G
DownloadVisualize
BU of 1b7g by Molmil
GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE
分子名称: PROTEIN (GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE), SULFATE ION
著者Isupov, M.N, Littlechild, J.A.
登録日1999-01-22
公開日1999-10-08
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Crystal structure of the glyceraldehyde-3-phosphate dehydrogenase from the hyperthermophilic archaeon Sulfolobus solfataricus.
J.Mol.Biol., 291, 1999
8XQB
DownloadVisualize
BU of 8xqb by Molmil
Mature virion portal vertex of bacteriophage lambda
分子名称: Capsid decoration protein, Head completion protein, Head-tail connector protein FII, ...
著者Wang, J.W, Gu, Z.W.
登録日2024-01-05
公開日2024-04-10
最終更新日2024-10-30
実験手法ELECTRON MICROSCOPY (4.07 Å)
主引用文献Structural morphing in the viral portal vertex of bacteriophage lambda.
J.Virol., 98, 2024
1AVK
DownloadVisualize
BU of 1avk by Molmil
CRYSTAL STRUCTURES OF THE COPPER-CONTAINING AMINE OXIDASE FROM ARTHROBACTER GLOBIFORMIS IN THE HOLO-AND APO-FORMS: IMPLICATIONS FOR THE BIOGENESIS OF TOPA QUINONE
分子名称: AMINE OXIDASE
著者Wilce, M.C.J, Guss, J.M, Freeman, H.C, Tanizawa, K, Yamaguchi, H.
登録日1997-09-16
公開日1998-03-18
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Crystal structures of the copper-containing amine oxidase from Arthrobacter globiformis in the holo and apo forms: implications for the biogenesis of topaquinone.
Biochemistry, 36, 1997
3ODU
DownloadVisualize
BU of 3odu by Molmil
The 2.5 A structure of the CXCR4 chemokine receptor in complex with small molecule antagonist IT1t
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (6,6-dimethyl-5,6-dihydroimidazo[2,1-b][1,3]thiazol-3-yl)methyl N,N'-dicyclohexylimidothiocarbamate, C-X-C chemokine receptor type 4, ...
著者Wu, B, Mol, C.D, Han, G.W, Katritch, V, Chien, E.Y.T, Liu, W, Cherezov, V, Stevens, R.C, Accelerated Technologies Center for Gene to 3D Structure (ATCG3D), GPCR Network (GPCR)
登録日2010-08-11
公開日2010-10-27
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Structures of the CXCR4 chemokine GPCR with small-molecule and cyclic peptide antagonists.
Science, 330, 2010
4I7P
DownloadVisualize
BU of 4i7p by Molmil
T4 Lysozyme L99A/M102H with 4-bromoimidazole bound
分子名称: 2-HYDROXYETHYL DISULFIDE, 4-bromo-1H-imidazole, ACETATE ION, ...
著者Merski, M, Shoichet, B.K.
登録日2012-11-30
公開日2013-03-27
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献The impact of introducing a histidine into an apolar cavity site on docking and ligand recognition.
J.Med.Chem., 56, 2013
1B8J
DownloadVisualize
BU of 1b8j by Molmil
ALKALINE PHOSPHATASE COMPLEXED WITH VANADATE
分子名称: MAGNESIUM ION, PROTEIN (ALKALINE PHOSPHATASE), SULFATE ION, ...
著者Holtz, K.M, Stec, B, Kantrowitz, E.R.
登録日1999-02-01
公開日1999-02-18
最終更新日2024-10-16
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A model of the transition state in the alkaline phosphatase reaction.
J.Biol.Chem., 274, 1999
4I8D
DownloadVisualize
BU of 4i8d by Molmil
Crystal Structure of Beta-D-glucoside glucohydrolase from Trichoderma reesei
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Beta-D-glucoside glucohydrolase, alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Helmich, K.E, Banerjee, G, Bianchetti, C.M, Gudmundsson, M, Sandgren, M, Walton, J.D, Phillips Jr, G.N, Center for Eukaryotic Structural Genomics (CESG)
登録日2012-12-03
公開日2012-12-19
最終更新日2024-11-20
実験手法X-RAY DIFFRACTION (2.48 Å)
主引用文献Biochemical Characterization and Crystal Structures of a Fungal Family 3 beta-Glucosidase, Cel3A from Hypocrea jecorina.
J.Biol.Chem., 289, 2014
4I9N
DownloadVisualize
BU of 4i9n by Molmil
Crystal structure of rabbit LDHA in complex with AP28161 and AP28122
分子名称: 6-({2-[(5-chloro-4-{[(2S)-2,3-dihydroxypropyl]oxy}-2-methoxyphenyl)amino]-2-oxoethyl}sulfanyl)pyridine-3-carboxylic acid, 6-[3-(carboxymethoxy)-5-fluorophenyl]pyridine-3-carboxylic acid, L-lactate dehydrogenase A chain
著者Zhou, T, Kohlmann, A, Stephan, Z.G, Li, F, Commodore, L, Greenfield, M.T, Shakespeare, W.C, Zhu, X, Dalgarno, D.C.
登録日2012-12-05
公開日2013-01-23
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Fragment growing and linking lead to novel nanomolar lactate dehydrogenase inhibitors.
J.Med.Chem., 56, 2013
4IAP
DownloadVisualize
BU of 4iap by Molmil
Crystal structure of PH domain of Osh3 from Saccharomyces cerevisiae
分子名称: Oxysterol-binding protein homolog 3,Endolysin,Oxysterol-binding protein homolog 3, SULFATE ION
著者Tong, J, Im, Y.J.
登録日2012-12-07
公開日2013-07-31
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure of osh3 reveals a conserved mode of phosphoinositide binding in oxysterol-binding proteins
Structure, 21, 2013
3COQ
DownloadVisualize
BU of 3coq by Molmil
Structural Basis for Dimerization in DNA Recognition by Gal4
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, DNA (5'-D(*DAP*DCP*DCP*DGP*DGP*DAP*DGP*DGP*DAP*DCP*DAP*DGP*DTP*DCP*DCP*DTP*DCP*DCP*DGP*DG)-3'), DNA (5'-D(*DTP*DCP*DCP*DGP*DGP*DAP*DGP*DGP*DAP*DCP*DTP*DGP*DTP*DCP*DCP*DTP*DCP*DCP*DGP*DG)-3'), ...
著者Hong, M, Fitzgerald, M.X, Harper, S, Luo, C, Speicher, D.W.
登録日2008-03-29
公開日2008-07-01
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Structural basis for dimerization in DNA recognition by gal4.
Structure, 16, 2008
2WPR
DownloadVisualize
BU of 2wpr by Molmil
Salmonella enterica SadA 483-523 fused to GCN4 adaptors (SadAK3b-V1, out-of-register fusion)
分子名称: CHLORIDE ION, TRIMERIC AUTOTRANSPORTER ADHESIN FRAGMENT
著者Hartmann, M.D, Ridderbusch, O, Lupas, A.N, Hernandez Alvarez, B.
登録日2009-08-09
公開日2009-11-03
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献A Coiled-Coil Motif that Sequesters Ions to the Hydrophobic Core.
Proc.Natl.Acad.Sci.USA, 106, 2009
1O16
DownloadVisualize
BU of 1o16 by Molmil
RECOMBINANT SPERM WHALE MYOGLOBIN H64D/V68S/D122N MUTANT (MET)
分子名称: MYOGLOBIN, PROTOPORPHYRIN IX CONTAINING FE, SULFATE ION
著者Phillips Jr, G.N.
登録日2002-10-25
公開日2003-11-04
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Molecular engineering of myoglobin: influence of residue 68 on the rate and the enantioselectivity of oxidation reactions catalyzed by H64D/V68X myoglobin
Biochemistry, 42, 2003

236060

件を2025-05-14に公開中

PDB statisticsPDBj update infoContact PDBjnumon