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4Z4R
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BU of 4z4r by Molmil
Crystal structure of GII.10 P domain in complex with 300mM fucose
分子名称: 1,2-ETHANEDIOL, Capsid protein, beta-L-fucopyranose
著者Koromyslova, A.D, Leuthold, M.M, Hansman, G.S.
登録日2015-04-02
公開日2015-05-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.801 Å)
主引用文献The sweet quartet: Binding of fucose to the norovirus capsid.
Virology, 483, 2015
7B8U
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BU of 7b8u by Molmil
Notum-Fragment 201
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 4-(piperidin-1-yl)-1,2,5-oxadiazol-3-amine, Palmitoleoyl-protein carboxylesterase NOTUM, ...
著者Zhao, Y, Jonees, E.Y.
登録日2020-12-13
公開日2022-01-12
最終更新日2024-11-06
実験手法X-RAY DIFFRACTION (1.54 Å)
主引用文献Structural Analysis and Development of Notum Fragment Screening Hits.
Acs Chem Neurosci, 13, 2022
6E9W
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BU of 6e9w by Molmil
Crystal structure of Rock1 with a pyridinylbenzamide based inhibitor
分子名称: N-[(2,3-dihydro-1,4-benzodioxin-5-yl)methyl]-4-(pyridin-4-yl)benzamide, Rho-associated protein kinase 1, SULFATE ION
著者Judge, R.A, Hobson, A.D.
登録日2018-08-01
公開日2018-11-14
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.96 Å)
主引用文献Identification of Selective Dual ROCK1 and ROCK2 Inhibitors Using Structure Based Drug Design.
J. Med. Chem., 61, 2018
5GMU
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BU of 5gmu by Molmil
Crystal structure of chorismate mutase like domain of bifunctional DAHP synthase of Bacillus subtilis in complex with Chlorogenic acid
分子名称: (1R,3R,4S,5R)-3-[3-[3,4-bis(oxidanyl)phenyl]propanoyloxy]-1,4,5-tris(oxidanyl)cyclohexane-1-carboxylic acid, Protein AroA(G), SULFATE ION
著者Pratap, S, Dev, A, Sharma, V, Yadav, R, Narwal, M, Tomar, S, Kumar, P.
登録日2016-07-16
公開日2017-07-26
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structure of Chorismate Mutase-like Domain of DAHPS from Bacillus subtilis Complexed with Novel Inhibitor Reveals Conformational Plasticity of Active Site.
Sci Rep, 7, 2017
6QB3
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BU of 6qb3 by Molmil
Apo Mcl1 in a complex with a scFv
分子名称: Induced myeloid leukemia cell differentiation protein Mcl-1, scFv55
著者Kazmirski, S, Hargreaves, D.
登録日2018-12-20
公開日2019-11-06
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Antibody fragments structurally enable a drug-discovery campaign on the cancer target Mcl-1.
Acta Crystallogr D Struct Biol, 75, 2019
6HMN
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BU of 6hmn by Molmil
POLYADPRIBOSYL GLYCOSIDASE IN COMPLEX WITH PDD00014909
分子名称: 3-methyl-6-[[(1-methylcyclopropyl)amino]-bis(oxidanyl)-$l^{4}-sulfanyl]-1-(phenylmethyl)quinazoline-2,4-dione, DIMETHYL SULFOXIDE, GLYCEROL, ...
著者Tucker, J.A, Brassington, C, Hassall, G.
登録日2018-09-12
公開日2018-11-14
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.87 Å)
主引用文献Cell-Active Small Molecule Inhibitors of the DNA-Damage Repair Enzyme Poly(ADP-ribose) Glycohydrolase (PARG): Discovery and Optimization of Orally Bioavailable Quinazolinedione Sulfonamides.
J.Med.Chem., 61, 2018
8OM1
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BU of 8om1 by Molmil
Mitochondrial complex I from Mus musculus in the active state
分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, ...
著者Grba, D.N, Chung, I, Bridges, H.R, Agip, A.N.A, Hirst, J.
登録日2023-03-31
公開日2023-08-09
最終更新日2023-08-16
実験手法ELECTRON MICROSCOPY (2.39 Å)
主引用文献Investigation of hydrated channels and proton pathways in a high-resolution cryo-EM structure of mammalian complex I.
Sci Adv, 9, 2023
7B8A
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BU of 7b8a by Molmil
Notum-Fragment 110
分子名称: 1,2-ETHANEDIOL, 1-cyclohexyl-3-(2-pyridin-4-ylethyl)urea, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Zhao, Y, Jonees, E.Y.
登録日2020-12-12
公開日2022-01-12
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (1.23 Å)
主引用文献Notum Fragment Screen
To Be Published
4IV5
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BU of 4iv5 by Molmil
X-ray crystal structure of a putative aspartate carbamoyltransferase from Trypanosoma cruzi
分子名称: 1,2-ETHANEDIOL, Aspartate carbamoyltransferase, putative, ...
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2013-01-22
公開日2013-04-10
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献X-ray crystal structure of a putative aspartate carbamoyltransferase from Trypanosoma cruzi
TO BE PUBLISHED
6TA3
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BU of 6ta3 by Molmil
Human kinesin-5 motor domain in the GSK-1 state bound to microtubules (Conformation 1)
分子名称: 6-[4-(trifluoromethyl)phenyl]-3,4-dihydro-1~{H}-quinolin-2-one, Kinesin-like protein KIF11, MAGNESIUM ION, ...
著者Pena, A, Sweeney, A, Cook, A.D, Moores, C.A, Topf, M.
登録日2019-10-29
公開日2020-04-22
最終更新日2025-10-01
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Structure of Microtubule-Trapped Human Kinesin-5 and Its Mechanism of Inhibition Revealed Using Cryoelectron Microscopy.
Structure, 28, 2020
6JVU
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BU of 6jvu by Molmil
Crystal structure of Klebsiella pneumoniae CysE in complex with L-cysteine
分子名称: 1,2-ETHANEDIOL, CYSTEINE, PHOSPHATE ION, ...
著者Verma, D, Gupta, V.
登録日2019-04-17
公開日2020-02-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Allosteric inhibition and kinetic characterization of Klebsiella pneumoniae CysE: An emerging drug target.
Int.J.Biol.Macromol., 151, 2020
5K0F
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BU of 5k0f by Molmil
Crystal Structure of COMT in complex with 5-[5-[1-(4-methoxyphenyl)ethyl]-1H-pyrazol-3-yl]-2,4-dimethyl-1,3-thiazole
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, 5-{3-[(1R)-1-(4-methoxyphenyl)ethyl]-1H-pyrazol-5-yl}-2,4-dimethyl-1,3-thiazole, Catechol O-methyltransferase, ...
著者Ehler, A, Rodriguez-Sarmiento, R.M, Rudolph, M.G.
登録日2016-05-17
公開日2016-09-07
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.81 Å)
主引用文献Design of Potent and Druglike Nonphenolic Inhibitors for Catechol O-Methyltransferase Derived from a Fragment Screening Approach Targeting the S-Adenosyl-l-methionine Pocket.
J. Med. Chem., 59, 2016
9YFB
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BU of 9yfb by Molmil
Crystal Structure UTP--glucose-1-phosphate uridylyltransferase from Bordetella pertussis in complex with UTP
分子名称: MAGNESIUM ION, URIDINE 5'-TRIPHOSPHATE, UTP--glucose-1-phosphate uridylyltransferase
著者Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2025-09-25
公開日2025-10-08
実験手法X-RAY DIFFRACTION (1.82 Å)
主引用文献Crystal Structure UTP--glucose-1-phosphate uridylyltransferase from Bordetella pertussis in complex with UTP
To be published
5K9V
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BU of 5k9v by Molmil
Protein Tyrosine Phosphatase 1B (1-301), open state
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CHLORIDE ION, GLYCEROL, ...
著者Choy, M.S, Peti, W, Page, R.
登録日2016-06-01
公開日2017-03-01
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.898 Å)
主引用文献Conformational Rigidity and Protein Dynamics at Distinct Timescales Regulate PTP1B Activity and Allostery.
Mol. Cell, 65, 2017
7QTZ
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BU of 7qtz by Molmil
Crystal structure of Iripin-1 serpin from tick Ixodes ricinus
分子名称: MAGNESIUM ION, Putative salivary serpin
著者Kascakova, B, Kuta Smatanova, I, Chmelar, J, Prudnikova, T.
登録日2022-01-17
公開日2023-01-25
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Iripin-1, a new anti-inflammatory tick serpin, inhibits leukocyte recruitment in vivo while altering the levels of chemokines and adhesion molecules.
Front Immunol, 14, 2023
7BF5
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BU of 7bf5 by Molmil
Crystal structure of SARS-CoV-2 macrodomain in complex with ADP-ribose-phosphate (ADP-ribose-2'-phosphate, ADPRP)
分子名称: 1,2-ETHANEDIOL, MAGNESIUM ION, NSP3 macrodomain, ...
著者Ni, X, Knapp, S, Chaikuad, A, Structural Genomics Consortium, Structural Genomics Consortium (SGC)
登録日2020-12-31
公開日2021-01-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural Insights into Plasticity and Discovery of Remdesivir Metabolite GS-441524 Binding in SARS-CoV-2 Macrodomain.
Acs Med.Chem.Lett., 12, 2021
7WU1
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BU of 7wu1 by Molmil
Crystal structure of phospholipase D from Moritella sp. JT01
分子名称: 1,2-ETHANEDIOL, Phospholipase D, SODIUM ION
著者Wang, Y.H, Mao, X.J, Wang, J, Wang, F.H.
登録日2022-02-05
公開日2023-02-08
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Crystal structure of phospholipase D from Moritella sp. JT01
To Be Published
4ZC4
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BU of 4zc4 by Molmil
Crystal structure of LARP1-unique domain DM15
分子名称: La-related protein 1, SULFATE ION
著者Lahr, R.M, Berman, A.J.
登録日2015-04-15
公開日2015-08-05
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献The La-related protein 1-specific domain repurposes HEAT-like repeats to directly bind a 5'TOP sequence.
Nucleic Acids Res., 43, 2015
4Z4T
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BU of 4z4t by Molmil
Crystal structure of GII.10 P domain in complex with 75mM fucose
分子名称: 1,2-ETHANEDIOL, Capsid protein, NITRATE ION, ...
著者Koromyslova, A.D, Leuthold, M.M, Hansman, G.S.
登録日2015-04-02
公開日2015-05-27
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The sweet quartet: Binding of fucose to the norovirus capsid.
Virology, 483, 2015
9YH9
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BU of 9yh9 by Molmil
Crystal structure of a phage catechol 1,2-deoxygenase identified from a soil metagenomic survey.
分子名称: Catechol 1,2-deoxygenase, FE (III) ION
著者Seattle Structural Genomics Center for Infectious Disease, Seattle Structural Genomics Center for Infectious Disease (SSGCID)
登録日2025-09-30
公開日2025-10-08
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structure of a phage catechol 1,2-deoxygenase identified from a soil metagenomic survey.
To be published
6Q11
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BU of 6q11 by Molmil
Crystal structure of MurA from Clostridium difficile, mutation C116S, in the presence of URIDINE-DIPHOSPHATE-2(N-ACETYLGLUCOSAMINYL) BUTYRIC ACID
分子名称: 1,2-ETHANEDIOL, SODIUM ION, UDP-N-acetylglucosamine 1-carboxyvinyltransferase, ...
著者Dopkins, B.J, Call, C.J, Thoden, J.B, Holden, H.M.
登録日2019-08-02
公開日2019-11-27
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of MurA from Clostridium difficile, mutation C116S, in the presence of URIDINE-DIPHOSPHATE-2(N-ACETYLGLUCOSAMINYL) BUTYRIC ACID
To Be Published
5K6T
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BU of 5k6t by Molmil
Crystal structure of Arabidopsis thaliana acetohydroxyacid synthase in complex with a sulfonylamino-carbonyl-triazolinone herbicide, propoxycarbazone-sodium
分子名称: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, 2-{3-[(4-AMINO-2-METHYLPYRIMIDIN-5-YL)METHYL]-4-METHYL-2-OXO-2,3-DIHYDRO-1,3-THIAZOL-5-YL}ETHYL TRIHYDROGEN DIPHOSPHATE, Acetolactate synthase, ...
著者Garcia, M.D, Lonhienne, T, Guddat, L.W.
登録日2016-05-25
公開日2017-02-08
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.763 Å)
主引用文献Comprehensive understanding of acetohydroxyacid synthase inhibition by different herbicide families.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5DTJ
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BU of 5dtj by Molmil
Crystal Structure of dfp-inhibited mouse acetylcholinesterase in complex with the reactivator SP-134
分子名称: 1-[5-(2,4-dichlorophenoxy)pentyl]-1H-imidazole, Acetylcholinesterase
著者Tran, T.H, Tong, L.
登録日2015-09-18
公開日2015-10-21
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.71 Å)
主引用文献Discovery of New Classes of Compounds that Reactivate Acetylcholinesterase Inhibited by Organophosphates.
Chembiochem, 16, 2015
5MMV
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BU of 5mmv by Molmil
Crystal structure of human Caspase-1 with 2-((2-naphthoyl)-L-valyl)-4-hydroxy-N-((3S)-2-hydroxy-5-oxotetrahydrofuran-3-yl)-2-azabicyclo[2.2.2]octane-3-carboxamide (Compound 1)
分子名称: (3~{S})-3-[[(3~{S})-2-[(2~{S})-3-methyl-2-(naphthalen-2-ylcarbonylamino)butanoyl]-4-oxidanyl-2-azabicyclo[2.2.2]octan-3-yl]carbonylamino]-4-oxidanyl-butanoic acid, Caspase-1
著者Brethon, A, Chantalat, L, Christin, O, Clary, L, Fournier, J.F, Gastreich, M, Harris, C, Pascau, J, Isabet, T, Rodeschin, V, Thoreau, E, Roche, D.
登録日2016-12-12
公開日2017-12-20
最終更新日2024-11-13
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献Crystal structure of human Caspase-1 with 2-((2-naphthoyl)-L-valyl)-4-hydroxy-N-((3S)-2-hydroxy-5-oxotetrahydrofuran-3-yl)-2-azabicyclo[2.2.2]octane-3-carboxamide (Compound 1)
To Be Published
6I6M
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BU of 6i6m by Molmil
Papaver somniferum O-methyltransferase 1
分子名称: (13aS)-3,10-dimethoxy-5,8,13,13a-tetrahydro-6H-isoquino[3,2-a]isoquinoline-2,9-diol, O-methyltransferase 1, S-ADENOSYL-L-HOMOCYSTEINE
著者Cabry, M.P, Offen, W.A, Winzer, T, Li, Y, Graham, I.A, Davies, G.J, Saleh, P.
登録日2018-11-15
公開日2019-03-27
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.2 Å)
主引用文献Structure of Papaver somniferum O-Methyltransferase 1 Reveals Initiation of Noscapine Biosynthesis with Implications for Plant Natural Product Methylation
Acs Catalysis, 2019

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