PDB: 183105 件ウェブページステータス検索Chemie searchBIRD

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5I0Y	COPPER-BOUND E46Q VARIANT OF UROPATHOGENIC ESCHERICHIA COLI STRAIN F11 FETP 分子名称: COPPER (II) ION, Periplasmic protein-probably involved in high-affinity Fe2+ transport 著者 Chan, A.C, Murphy, M.E. 登録日 2016-02-04 公開日 2017-02-08 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.4 Å) 主引用文献 A copper site is required for iron transport by the periplasmic proteins P19 and FetP. Metallomics, 12, 2020
2RH2	High Resolution DHFR R-67 分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, Dihydrofolate reductase type 2 著者 Krahn, J.M, London, R.E. 登録日 2007-10-05 公開日 2008-06-03 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (0.96 Å) 主引用文献 Crystal Structure of a Type II Dihydrofolate Reductase Catalytic Ternary Complex Biochemistry, 46, 2007
6ORM	Crystal Structure of Peruvianin-I (Cysteine peptidase from Thevetia peruviana latex) 分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Peruvianin-I, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... 著者 Cruz, W.T, Bezerra, E.H.S, da Silva, F.M.S, Freire, V.N, Ramos, M.V, Rocha, B.A.M, Freitas, C.D.T. 登録日 2019-04-30 公開日 2020-05-06 最終更新日 2023-10-11 実験手法 X-RAY DIFFRACTION (2.15 Å) 主引用文献 Crystal structure and specific location of a germin-like protein with proteolytic activity from Thevetia peruviana. Plant Sci., 298, 2020
5LLO	Crystal structure of human carbonic anhydrase isozyme XII with 3-[(1S)-2,3-Dihydro-1H-inden-1-ylamino]-2,5,6-trifluoro-4-[(2-hy-droxyethyl)sulfonyl]benzenesulfonamide 分子名称: 1,2-ETHANEDIOL, 3-[(1S)-2,3-dihydro-1H-inden-1-ylamino]-2,5,6-trifluoro-4-[(2-hydroxyethyl)sulfonyl]benzenesulfonamide, Carbonic anhydrase 12, ... 著者 Smirnov, A, Manakova, E, Grazulis, S. 登録日 2016-07-28 公開日 2017-08-16 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Crystal structure correlations with the intrinsic thermodynamics of human carbonic anhydrase inhibitor binding. PeerJ, 6, 2018
5ID2	Asymmetry in the active site of Mycobacterium tuberculosis AhpE upon exposure to Mycothiol 分子名称: ACETATE ION, GLYCEROL, Putative peroxiredoxin Rv2238c 著者 Kumar, A, Balakrishna, A.M, Gruber, G. 登録日 2016-02-23 公開日 2016-08-03 最終更新日 2023-11-15 実験手法 X-RAY DIFFRACTION (2.43 Å) 主引用文献 Redox chemistry of Mycobacterium tuberculosis alkylhydroperoxide reductase E (AhpE): Structural and mechanistic insight into a mycoredoxin-1 independent reductive pathway of AhpE via mycothiol Free Radic. Biol. Med., 97, 2016
5ICV	Crystal structure of human NatF (hNaa60) bound to a bisubstrate analogue 分子名称: MET-LYS-ALA-VAL-LIG, N-alpha-acetyltransferase 60, [5-(6-amino-9H-purin-9-yl)-4-hydroxy-3-(phosphonooxy)furan-2-yl]methyl (3R)-4-{[3-({(E)-2-[(2,2-dihydroxyethyl)sulfanyl]ethenyl}amino)-3-oxopropyl]amino}-3-hydroxy-2,2-dimethyl-4-oxobutyl dihydrogen diphosphate 著者 Stove, S.I, Magin, R.S, Marmorstein, R, Arnesen, T. 登録日 2016-02-23 公開日 2016-06-22 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.53 Å) 主引用文献 Crystal Structure of the Golgi-Associated Human N alpha-Acetyltransferase 60 Reveals the Molecular Determinants for Substrate-Specific Acetylation. Structure, 24, 2016
5I0V	IRON AND COPPER-BOUND P19 FROM CAMPYLOBACTER JEJUNI UNDER OXIDIZING CONDITIONS 分子名称: CHLORIDE ION, COPPER (II) ION, FE (III) ION, ... 著者 Chan, A.C, Murphy, M.E. 登録日 2016-02-04 公開日 2017-02-08 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.65 Å) 主引用文献 A copper site is required for iron transport by the periplasmic proteins P19 and FetP. Metallomics, 12, 2020
5LLP	Crystal structure of human carbonic anhydrase isozyme XII with 3-[(1S)-1,2,3,4-Tetrahydronapthalen-1-ylamino)-2,5,6-trifluoro-4-[(2-hydroxyethyl)sulfonyl]benzenesulfonamide 分子名称: 3-[(1S)-1,2,3,4-Tetrahydronapthalen-1-ylamino)-2,5,6-trifluoro-4-[(2-hydroxyethyl)sulfonyl]benzenesulfonamide, Carbonic anhydrase 12, ZINC ION 著者 Smirnov, A, Manakova, E, Grazulis, S. 登録日 2016-07-28 公開日 2017-08-16 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.48 Å) 主引用文献 Crystal structure correlations with the intrinsic thermodynamics of human carbonic anhydrase inhibitor binding. PeerJ, 6, 2018
5IDI	Structure of beta glucosidase 1A from Thermotoga neapolitana, mutant E349A 分子名称: 1,4-beta-D-glucan glucohydrolase, ACETATE ION 著者 Kulkarni, T, Nordberg Karlsson, E, Logan, D.T. 登録日 2016-02-24 公開日 2017-02-08 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.9 Å) 主引用文献 Crystal structure of beta-glucosidase 1A from Thermotoga neapolitana and comparison of active site mutants for hydrolysis of flavonoid glucosides. Proteins, 85, 2017
5LLC	Crystal structure of human carbonic anhydrase isozyme II with 3-(Methylamino)-2,5,6-trifluoro-4-[(2-phenylethyl)sulfonyl]benzenesulfonamide 分子名称: 1,2-ETHANEDIOL, 2,3,6-tris(fluoranyl)-5-(methylamino)-4-(2-phenylethylsulfonyl)benzenesulfonamide, Carbonic anhydrase 2, ... 著者 Manakova, E, Smirnov, A, Grazulis, S. 登録日 2016-07-27 公開日 2017-08-16 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (1.1 Å) 主引用文献 Crystal structure correlations with the intrinsic thermodynamics of human carbonic anhydrase inhibitor binding. PeerJ, 6, 2018
5WGT	Crystal Structure of MalA' H253A, premalbrancheamide complex 分子名称: (5aS,12aS,13aS)-12,12-dimethyl-2,3,11,12,12a,13-hexahydro-1H,5H,6H-5a,13a-(epiminomethano)indolizino[7,6-b]carbazol-14-one, CADMIUM ION, CHLORIDE ION, ... 著者 Fraley, A.E, Smith, J.L. 登録日 2017-07-14 公開日 2017-08-16 最終更新日 2023-10-04 実験手法 X-RAY DIFFRACTION (2.093 Å) 主引用文献 Function and Structure of MalA/MalA', Iterative Halogenases for Late-Stage C-H Functionalization of Indole Alkaloids. J. Am. Chem. Soc., 139, 2017
6SG9	Head domain of the mt-SSU assemblosome from Trypanosoma brucei 分子名称: 9S rRNA, GUANOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ... 著者 Saurer, M, Ramrath, D.J.F, Niemann, M, Calderaro, S, Prange, C, Mattei, S, Scaiola, A, Leitner, A, Bieri, P, Horn, E.K, Leibundgut, M, Boehringer, D, Schneider, A, Ban, N. 登録日 2019-08-03 公開日 2019-09-18 最終更新日 2024-05-22 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Mitoribosomal small subunit biogenesis in trypanosomes involves an extensive assembly machinery. Science, 365, 2019
5EL7	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycin 分子名称: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ... 著者 Rozov, A, Demeshkina, N, Khusainov, I, Yusupov, M, Yusupova, G. 登録日 2015-11-04 公開日 2016-01-27 最終更新日 2024-01-10 実験手法 X-RAY DIFFRACTION (3.15 Å) 主引用文献 Novel base-pairing interactions at the tRNA wobble position crucial for accurate reading of the genetic code. Nat Commun, 7, 2016
1P8N	Structural and Functional Importance of First-Shell Metal Ligands in the Binuclear Manganese Cluster of Arginase I. 分子名称: Arginase 1, GLYCEROL, MANGANESE (II) ION 著者 Cama, E, Emig, F.A, Ash, D.E, Christianson, D.W. 登録日 2003-05-07 公開日 2003-06-17 最終更新日 2023-08-16 実験手法 X-RAY DIFFRACTION (2.9 Å) 主引用文献 Structural and functional importance of first-shell metal ligands in the binuclear manganese cluster of arginase I Biochemistry, 42, 2003
5I0W	IRON AND COPPER-BOUND P19 FROM CAMPYLOBACTER JEJUNI UNDER REDUCING CONDITIONS 分子名称: CHLORIDE ION, COPPER (I) ION, FE (II) ION, ... 著者 Chan, A.C, Murphy, M.E. 登録日 2016-02-04 公開日 2017-02-08 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.55 Å) 主引用文献 A copper site is required for iron transport by the periplasmic proteins P19 and FetP. Metallomics, 12, 2020
2IDO	Structure of the E. coli Pol III epsilon-Hot proofreading complex 分子名称: 1,2-ETHANEDIOL, DNA polymerase III epsilon subunit, Hot protein, ... 著者 Kirby, T.W, Harvey, S, DeRose, E.F, Chalov, S, Chikova, A.K, Perrino, F.W, Schaaper, R.M, London, R.E, Pedersen, L.C. 登録日 2006-09-15 公開日 2006-11-14 最終更新日 2023-08-30 実験手法 X-RAY DIFFRACTION (2.1 Å) 主引用文献 Structure of the Escherichia coli DNA polymerase III epsilon-HOT proofreading complex. J.Biol.Chem., 281, 2006
1E1V	HUMAN CYCLIN DEPENDENT KINASE 2 COMPLEXED WITH THE INHIBITOR NU2058 分子名称: 6-O-CYCLOHEXYLMETHYL GUANINE, CYCLIN-DEPENDENT PROTEIN KINASE 2 著者 Endicott, J.A, Noble, M.E.M, Johnson, L.N. 登録日 2000-05-11 公開日 2001-05-10 最終更新日 2023-12-06 実験手法 X-RAY DIFFRACTION (1.95 Å) 主引用文献 Identification of Novel Purine and Pyrimidine Cyclin-Dependent Kinase Inhibitors with Distinct Molecular Interactions and Tumor Cell Growth Inhibition Profiles. J.Med.Chem., 43, 2000
6EUD	Crystal structure of E. coli DExH-box NTPase HrpB 分子名称: 1,2-ETHANEDIOL, ATP-dependent RNA helicase HrpB 著者 Pietrzyk-Brzezinska, A.J, Wahl, M.C. 登録日 2017-10-30 公開日 2018-09-12 最終更新日 2024-05-08 実験手法 X-RAY DIFFRACTION (2.4 Å) 主引用文献 Crystal Structure of the Escherichia coli DExH-Box NTPase HrpB. Structure, 26, 2018
5MSB	Crystal structure of human carbonic anhydrase isozyme XII with 2,3,5,6-tetrafluoro-4[(2-hydroxyethyl)sulfonyl]benzenesulfonamide 分子名称: 1,2-ETHANEDIOL, 2,3,5,6-tetrafluoro-4-[(2-hydroxyethyl)sulfonyl]benzenesulfonamide, Carbonic anhydrase 12, ... 著者 Smirnov, A, Manakova, E, Grazulis, S. 登録日 2017-01-02 公開日 2018-01-17 最終更新日 2024-01-17 実験手法 X-RAY DIFFRACTION (1.3 Å) 主引用文献 Crystal structure correlations with the intrinsic thermodynamics of human carbonic anhydrase inhibitor binding. PeerJ, 6, 2018
5IXG	Crystal Structure of Burkholderia cenocepacia BcnB 分子名称: (2E,6E,10E,14E,18E,22E,26E)-3,7,11,15,19,23,27,31-OCTAMETHYLDOTRIACONTA-2,6,10,14,18,22,26,30-OCTAENYL TRIHYDROGEN DIPHOSPHATE, DI(HYDROXYETHYL)ETHER, YceI 著者 Loutet, S.A, Murphy, M.E.P. 登録日 2016-03-23 公開日 2017-03-22 最終更新日 2023-09-27 実験手法 X-RAY DIFFRACTION (1.6 Å) 主引用文献 Antibiotic Capture by Bacterial Lipocalins Uncovers an Extracellular Mechanism of Intrinsic Antibiotic Resistance. MBio, 8, 2017
6UWO	Crystal structure of receptor binding domain 2 from Clostridium difficile translocase CDTb 分子名称: ADP-ribosyltransferase binding component 著者 Pozharski, E. 登録日 2019-11-05 公開日 2020-01-22 最終更新日 2024-03-06 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structure of the cell-binding component of theClostridium difficilebinary toxin reveals a di-heptamer macromolecular assembly. Proc.Natl.Acad.Sci.USA, 117, 2020
2WBB	FRUCTOSE-1,6-BISPHOSPHATASE(D-FRUCTOSE-1,6-BISPHOSPHATE-1- PHOSPHOHYDROLASE) (E.C.3.1.3.11) COMPLEXED WITH AN AMP SITE INHIBITOR 分子名称: FRUCTOSE-1,6-BISPHOSPHATASE 1, N-{[(2Z)-5-BROMO-1,3-THIAZOL-2(3H)-YLIDENE]CARBAMOYL}-4-METHYLBENZENESULFONAMIDE 著者 Ruf, A, Joseph, C, Benz, J, Fol, B, Tetaz, T, Kitas, E, Mohr, P, Kuhn, B, Wessel, H.P, Hebeisen, P, Haap, W, Huber, W, Alvarez Sanchez, R, Paehler, A, Bernadeau, A, Gubler, M, Schott, B, Tozzo, E. 登録日 2009-02-26 公開日 2009-12-22 最終更新日 2023-12-13 実験手法 X-RAY DIFFRACTION (2.22 Å) 主引用文献 Sulfonylureido Thiazoles as Fructose-1,6-Bisphosphatase Inhibitors for the Treatment of Type-2 Diabetes. Bioorg.Med.Chem.Lett., 20, 2010
6SGA	Body domain of the mt-SSU assemblosome from Trypanosoma brucei 分子名称: 9S rRNA, MAGNESIUM ION, PHOSPHATE ION, ... 著者 Saurer, M, Ramrath, D.J.F, Niemann, M, Calderaro, S, Prange, C, Mattei, S, Scaiola, A, Leitner, A, Bieri, P, Horn, E.K, Leibundgut, M, Boehringer, D, Schneider, A, Ban, N. 登録日 2019-08-03 公開日 2019-09-18 最終更新日 2019-09-25 実験手法 ELECTRON MICROSCOPY (3.1 Å) 主引用文献 Mitoribosomal small subunit biogenesis in trypanosomes involves an extensive assembly machinery. Science, 365, 2019
7ZMH	CryoEM structure of mitochondrial complex I from Chaetomium thermophilum (state 1) - membrane arm 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ... 著者 Laube, E, Kuehlbrandt, W. 登録日 2022-04-19 公開日 2022-11-30 最終更新日 2022-12-07 実験手法 ELECTRON MICROSCOPY (2.47 Å) 主引用文献 Conformational changes in mitochondrial complex I of the thermophilic eukaryote Chaetomium thermophilum. Sci Adv, 8, 2022
7ZM7	CryoEM structure of mitochondrial complex I from Chaetomium thermophilum (inhibited by DDM) 分子名称: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 1,2-Distearoyl-sn-glycerophosphoethanolamine, Acyl carrier protein, ... 著者 Laube, E, Kuehlbrandt, W. 登録日 2022-04-19 公開日 2022-11-30 最終更新日 2022-12-07 実験手法 ELECTRON MICROSCOPY (2.77 Å) 主引用文献 Conformational changes in mitochondrial complex I of the thermophilic eukaryote Chaetomium thermophilum. Sci Adv, 8, 2022

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