PDB: 13252 件ウェブページステータス検索Chemie searchBIRD

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3NPN	Structure of the s-adenosylhomocysteine riboswitch at 3.0A 分子名称: S-ADENOSYL-L-HOMOCYSTEINE, S-ADENOSYLHOMOCYSTEINE RIBOSWITCH 著者 Reyes, F.E, Edwards, A.E, Batey, R.T. 登録日 2010-06-28 公開日 2010-10-06 最終更新日 2023-12-27 実験手法 X-RAY DIFFRACTION (2.792 Å) 主引用文献 Structural basis for recognition of S-adenosylhomocysteine by riboswitches. Rna, 16, 2010
6T7X	Crystal structure of PCNA from P. abyssi 分子名称: DNA polymerase sliding clamp 著者 Madru, C, Raia, P, Hugonneau Beaufet, I, Delarue, M, Carroni, M, Sauguet, L. 登録日 2019-10-23 公開日 2020-03-04 最終更新日 2024-01-24 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Structural basis for the increased processivity of D-family DNA polymerases in complex with PCNA. Nat Commun, 11, 2020
2QH4	Solution structure of the U85 C/D-H/ACA scaRNA 5' terminal hairpin loop 分子名称: Human U85 C/D-H/ACA scaRNA 著者 Feigon, J, Theimer, C.A, Chim, N, Breece, K.E. 登録日 2007-06-29 公開日 2007-09-25 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Structural and functional characterization of human telomerase RNA processing and cajal body localization signals. Mol.Cell, 27, 2007
2QH3	Solution structure of the U64 H/ACA snoRNA 3' terminal hairpin loop 分子名称: Human U64 H/ACA snoRNA 著者 Feigon, J, Theimer, C.A, Chim, N, Breece, K.E. 登録日 2007-06-29 公開日 2007-09-25 最終更新日 2024-05-22 実験手法 SOLUTION NMR 主引用文献 Structural and functional characterization of human telomerase RNA processing and cajal body localization signals. Mol.Cell, 27, 2007
2QH2	Solution structure of the CR7 terminal hairpin loop from human telomerase RNA 分子名称: Human telomerase RNA CR7 terminal hairpin loop 著者 Feigon, J, Theimer, C.A, Chim, N, Breece, K.E. 登録日 2007-06-29 公開日 2007-09-25 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 Structural and functional characterization of human telomerase RNA processing and cajal body localization signals. Mol.Cell, 27, 2007
2M17	ubiquitin-like domain-containing C-terminal domain phosphatase (UBLCP1) 分子名称: Ubiquitin-like domain-containing CTD phosphatase 1 著者 Lee, W, Yun, J. 登録日 2012-11-19 公開日 2013-06-05 最終更新日 2023-06-14 実験手法 SOLUTION NMR 主引用文献 Solution Structure and Rpn1 Interaction of the UBL Domain of Human RNA Polymerase II C-Terminal Domain Phosphatase. Plos One, 8, 2013
2M1V	NMR solution structure of the d3'-hairpin from the Sc.ai5gamma group II intron including the EBS1:dIBS1 RNA:DNA hybrid 分子名称: DNA_(5'-D(*CP*AP*GP*TP*GP*TP*C)-3')_, RNA (29-MER) 著者 Skilandat, M, Sigel, R.K.O. 登録日 2012-12-07 公開日 2014-06-11 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 The Role of Mg(II) in DNA Cleavage Site Recognition in Group II Intron Ribozymes: SOLUTION STRUCTURE AND METAL ION BINDING SITES OF THE RNADNA COMPLEX. J.Biol.Chem., 289, 2014
2KTQ	OPEN TERNARY COMPLEX OF THE LARGE FRAGMENT OF DNA POLYMERASE I FROM THERMUS AQUATICUS 分子名称: 2',3'-DIDEOXYCYTIDINE 5'-TRIPHOSPHATE, DNA (5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*GP*CP*DOC)-3'), DNA (5'-D(*GP*GP*GP*CP*GP*CP*CP*GP*TP*GP*GP*TP*C)-3'), ... 著者 Li, Y, Waksman, G. 登録日 1998-07-30 公開日 1999-01-13 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.3 Å) 主引用文献 Crystal structures of open and closed forms of binary and ternary complexes of the large fragment of Thermus aquaticus DNA polymerase I: structural basis for nucleotide incorporation. EMBO J., 17, 1998
2R8G	Selectivity of Nucleoside Triphosphate Incorporation Opposite 1,N2-Propanodeoxyguanosine (PdG) by the Sulfolobus solfataricus DNA Polymerase Dpo4 Polymerase 分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, 5'-D(*DGP*DGP*DGP*DGP*DGP*DAP*DAP*DGP*DGP*DAP*DTP*DTP*DT)-3', 5'-D(*DTP*DCP*DAP*DCP*(P)P*DGP*DAP*DAP*DAP*DTP*DCP*DCP*DTP*DTP*DCP*DCP*DCP*DCP*DC)-3', ... 著者 Wang, Y, Saleh, S, Marnette, L.J, Egli, M, Stone, M.P. 登録日 2007-09-10 公開日 2008-07-22 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.7 Å) 主引用文献 Insertion of dNTPs opposite the 1,N2-propanodeoxyguanosine adduct by Sulfolobus solfataricus P2 DNA polymerase IV Biochemistry, 47, 2008
2R8I	Selectivity of Nucleoside Triphosphate Incorporation Opposite 1,N2-Propanodeoxyguanosine (PdG) by the Sulfolobus solfataricus DNA Polymerase Dpo4 Polymerase 分子名称: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*DGP*DGP*DGP*DGP*DGP*DAP*DAP*DGP*DGP*DAP*DTP*DTP*DC)-3'), ... 著者 Wang, Y, Saleh, S, Marnette, L.J, Egli, M, Stone, M.P. 登録日 2007-09-10 公開日 2008-07-22 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.38 Å) 主引用文献 Insertion of dNTPs opposite the 1,N2-propanodeoxyguanosine adduct by Sulfolobus solfataricus P2 DNA polymerase IV Biochemistry, 47, 2008
2R8H	Selectivity of Nucleoside Triphosphate Incorporation Opposite 1,N2-Propanodeoxyguanosine (PdG) by the Sulfolobus solfataricus DNA Polymerase Dpo4 Polymerase 分子名称: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, CALCIUM ION, DNA (5'-D(*DGP*DGP*DGP*DGP*DGP*DAP*DAP*DGP*DGP*DAP*DTP*DTP*DC)-3'), ... 著者 Wang, Y, Saleh, S, Marnette, L.J, Egli, M, Stone, M.P. 登録日 2007-09-10 公開日 2008-07-22 最終更新日 2024-02-21 実験手法 X-RAY DIFFRACTION (2.48 Å) 主引用文献 Insertion of dNTPs opposite the 1,N2-propanodeoxyguanosine adduct by Sulfolobus solfataricus P2 DNA polymerase IV Biochemistry, 47, 2008
2JTP	Solution Structure of the Frameshift-Inducing RNA Stem-Loop in SIV 分子名称: SIV17-50 RNA (34-MER) 著者 Marcheschi, R.J, Staple, D.W, Butcher, S.E. 登録日 2007-08-04 公開日 2007-10-02 最終更新日 2024-05-29 実験手法 SOLUTION NMR 主引用文献 Programmed Ribosomal Frameshifting in SIV Is Induced by a Highly Structured RNA Stem-Loop J.Mol.Biol., 373, 2007
3HYF	Crystal structure of HIV-1 RNase H p15 with engineered E. coli loop and active site inhibitor 分子名称: 2-(3,4-dichlorobenzyl)-5,6-dihydroxypyrimidine-4-carboxylic acid, ACETATE ION, GLYCEROL, ... 著者 Lansdon, E.B, Kirschberg, T.A. 登録日 2009-06-22 公開日 2009-10-20 最終更新日 2024-03-13 実験手法 X-RAY DIFFRACTION (1.7 Å) 主引用文献 RNase H active site inhibitors of human immunodeficiency virus type 1 reverse transcriptase: design, biochemical activity, and structural information. J.Med.Chem., 52, 2009
8Q3R	Cryo-EM structure of the DNA polymerase holoenzyme E9-A20-D4 of vaccinia virus 分子名称: DNA polymerase, DNA polymerase processivity factor component OPG148, Uracil-DNA glycosylase 著者 Burmeister, W.P, Ballandras-Colas, A, Boettcher, B, Grimm, C. 登録日 2023-08-04 公開日 2024-05-08 最終更新日 2024-06-05 実験手法 ELECTRON MICROSCOPY (3.8 Å) 主引用文献 Structure and flexibility of the DNA polymerase holoenzyme of vaccinia virus. Plos Pathog., 20, 2024
2NCI	RNA Bulge Loop that Specifically Binds Metal Ions 分子名称: RNA (28-MER) 著者 Gu, X, Schroeder, S.J. 登録日 2016-04-01 公開日 2016-09-28 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 NMR Structures and Dynamics in a Prohead RNA Loop that Binds Metal Ions. J Phys Chem Lett, 7, 2016
8TDZ	16mer self-complementary duplex RNA with D:U pair sequence 2 分子名称: COBALT HEXAMMINE(III), RNA 著者 Fang, Z, Jia, X, Szostak, J.W. 登録日 2023-07-05 公開日 2024-06-12 最終更新日 2024-06-26 実験手法 X-RAY DIFFRACTION (1.64 Å) 主引用文献 Diaminopurine in Nonenzymatic RNA Template Copying. J.Am.Chem.Soc., 146, 2024
8TE0	16mer self-complementary duplex RNA with D:C pair sequence 1 分子名称: MAGNESIUM ION, RNA 著者 Fang, Z, Jia, X, Szostak, J.W. 登録日 2023-07-05 公開日 2024-06-12 最終更新日 2024-06-26 実験手法 X-RAY DIFFRACTION (1.42 Å) 主引用文献 Diaminopurine in Nonenzymatic RNA Template Copying. J.Am.Chem.Soc., 146, 2024
8TDY	16mer self-complementary duplex RNA with D:U pair sequence 1 分子名称: MAGNESIUM ION, RNA 著者 Fang, Z, Jia, X, Szostak, J.W. 登録日 2023-07-05 公開日 2024-06-12 最終更新日 2024-06-26 実験手法 X-RAY DIFFRACTION (1.66 Å) 主引用文献 Diaminopurine in Nonenzymatic RNA Template Copying. J.Am.Chem.Soc., 146, 2024
8TE2	16mer self-complementary duplex RNA with D:C pair sequence 2 分子名称: CALCIUM ION, RNA 著者 Fang, Z, Jia, X, Szostak, J.W. 登録日 2023-07-05 公開日 2024-06-12 最終更新日 2024-06-26 実験手法 X-RAY DIFFRACTION (1.63 Å) 主引用文献 Diaminopurine in Nonenzymatic RNA Template Copying. J.Am.Chem.Soc., 146, 2024
8BS7	Multimerisation domain of Borna disease virus 1 分子名称: Phosphoprotein 著者 Whitehead, J.D, Grimes, J.M, Keown, J.R. 登録日 2022-11-24 公開日 2023-04-05 最終更新日 2024-06-19 実験手法 X-RAY DIFFRACTION (3.2 Å) 主引用文献 Structural and biophysical characterization of the Borna disease virus 1 phosphoprotein. Acta Crystallogr.,Sect.F, 79, 2023
2PN9	NMR structure of a kissing complex formed between the TAR RNA element of HIV-1 and a LNA modified aptamer 分子名称: 5'-R(*GP*GP*AP*GP*CP*CP*UP*GP*GP*GP*AP*GP*CP*UP*CP*C)-3', RNA 16-mer with locked residues 9-10 著者 Lebars, I, Richard, T, Di Primo, C, Toulme, J.-J. 登録日 2007-04-24 公開日 2007-10-30 最終更新日 2024-05-01 実験手法 SOLUTION NMR 主引用文献 NMR structure of a kissing complex formed between the TAR RNA element of HIV-1 and a LNA-modified aptamer Nucleic Acids Res., 35, 2007
4OD8	Crystal structure of the vaccinia virus DNA polymerase holoenzyme subunit D4 in complex with the A20 N-terminus 分子名称: DNA polymerase processivity factor component A20, GLYCEROL, SULFATE ION, ... 著者 Contesto-Richefeu, C, Tarbouriech, N, Brazzolotto, X, Burmeister, W.P, Iseni, F. 登録日 2014-01-10 公開日 2014-03-26 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (1.85 Å) 主引用文献 Crystal structure of the vaccinia virus DNA polymerase holoenzyme subunit d4 in complex with the a20 N-terminal domain. Plos Pathog., 10, 2014
4ODA	Crystal structure of the vaccinia virus DNA polymerase holoenzyme subunit D4 in complex with the A20 N-terminus 分子名称: DNA polymerase processivity factor component A20, GLYCEROL, SULFATE ION, ... 著者 Contesto-Richefeu, C, Tarbouriech, N, Brazzolotto, X, Burmeister, W.P, Iseni, F. 登録日 2014-01-10 公開日 2014-03-26 最終更新日 2023-09-20 実験手法 X-RAY DIFFRACTION (2.2 Å) 主引用文献 Crystal structure of the vaccinia virus DNA polymerase holoenzyme subunit d4 in complex with the a20 N-terminal domain. Plos Pathog., 10, 2014
6ZXP	Solution structure of the C-terminal domain of the vaccinia virus DNA polymerase processivity factor component A20 fused to a short peptide from the viral DNA polymerase E9. 分子名称: DNA polymerase processivity factor component A20,DNA polymerase processivity factor component E9 著者 Bersch, B, Tarbouriech, N, Burmeister, W, Iseni, F. 登録日 2020-07-30 公開日 2021-05-19 最終更新日 2024-06-19 実験手法 SOLUTION NMR 主引用文献 Solution Structure of the C-terminal Domain of A20, the Missing Brick for the Characterization of the Interface between Vaccinia Virus DNA Polymerase and its Processivity Factor. J.Mol.Biol., 433, 2021
6ZYC	Solution structure of the C-terminal domain of the vaccinia virus DNA polymerase processivity factor component A20. 分子名称: DNA polymerase processivity factor component A20 著者 Bersch, B, Iseni, F, Burmeister, W, Tarbouriech, N. 登録日 2020-07-31 公開日 2021-05-19 最終更新日 2024-06-19 実験手法 SOLUTION NMR 主引用文献 Solution Structure of the C-terminal Domain of A20, the Missing Brick for the Characterization of the Interface between Vaccinia Virus DNA Polymerase and its Processivity Factor. J.Mol.Biol., 433, 2021

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